RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 SPON1Q9HCB6 807 aa17.42■□□□□ 0.38
PRKCH-206ENST00000553830 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.42■□□□□ 0.38
PRKCH-206ENST00000553830 CIAO1O76071 339 aa17.41■□□□□ 0.38
PRKCH-206ENST00000553830 SRGNP10124 158 aa17.41■□□□□ 0.38
PRKCH-206ENST00000553830 C16orf71Q8IYS4 520 aaPredicted RBP17.41■□□□□ 0.38
PRKCH-206ENST00000553830 WWC3Q9ULE0 1092 aa17.41■□□□□ 0.38
PRKCH-206ENST00000553830 SLX4Q8IY92 1834 aa17.4■□□□□ 0.38
PRKCH-206ENST00000553830 KLRG2A4D1S0 409 aaPredicted RBP17.4■□□□□ 0.38
PRKCH-206ENST00000553830 AACSQ86V21 672 aa17.4■□□□□ 0.38
PRKCH-206ENST00000553830 MASTLQ96GX5 879 aa17.4■□□□□ 0.38
PRKCH-206ENST00000553830 SGIP1Q9BQI5 828 aa17.4■□□□□ 0.38
PRKCH-206ENST00000553830 CEP126Q9P2H0 1117 aa17.4■□□□□ 0.38
PRKCH-206ENST00000553830 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
PRKCH-206ENST00000553830 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
PRKCH-206ENST00000553830 KIAA1551Q9HCM1 1747 aa17.39■□□□□ 0.37
PRKCH-206ENST00000553830 A0A0G2JLW4 131 aa17.39■□□□□ 0.37
PRKCH-206ENST00000553830 PPEF1O14829 653 aaPredicted RBP17.39■□□□□ 0.37
PRKCH-206ENST00000553830 TAF5LO75529 589 aa17.39■□□□□ 0.37
PRKCH-206ENST00000553830 DPEP1P16444 411 aa17.39■□□□□ 0.37
PRKCH-206ENST00000553830 PDE4AP27815 886 aa17.39■□□□□ 0.37
PRKCH-206ENST00000553830 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
PRKCH-206ENST00000553830 CRAMP1Q96RY5 1269 aa17.39■□□□□ 0.37
PRKCH-206ENST00000553830 HOXA10P31260 410 aaPredicted RBP17.38■□□□□ 0.37
PRKCH-206ENST00000553830 CHRNDQ07001 517 aa17.38■□□□□ 0.37
PRKCH-206ENST00000553830 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
PRKCH-206ENST00000553830 CCDC8Q9H0W5 538 aaPredicted RBP17.38■□□□□ 0.37
PRKCH-206ENST00000553830 BSDC1Q9NW68 430 aaPredicted RBP17.38■□□□□ 0.37
PRKCH-206ENST00000553830 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
PRKCH-206ENST00000553830 MROH5Q6ZUA9 1318 aa17.38■□□□□ 0.37
PRKCH-206ENST00000553830 IFIT2P09913 472 aaKnown RBP17.37■□□□□ 0.37
PRKCH-206ENST00000553830 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
PRKCH-206ENST00000553830 STYK1Q6J9G0 422 aa17.37■□□□□ 0.37
PRKCH-206ENST00000553830 NEUROD6Q96NK8 337 aa17.37■□□□□ 0.37
PRKCH-206ENST00000553830 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
PRKCH-206ENST00000553830 ZNF609O15014 1411 aa17.37■□□□□ 0.37
PRKCH-206ENST00000553830 ALDH1B1P30837 517 aa17.36■□□□□ 0.37
PRKCH-206ENST00000553830 TSHZ3Q63HK5 1081 aa17.36■□□□□ 0.37
PRKCH-206ENST00000553830 EAF2Q96CJ1 260 aaPredicted RBP17.36■□□□□ 0.37
PRKCH-206ENST00000553830 TLR7Q9NYK1 1049 aaKnown RBP17.36■□□□□ 0.37
PRKCH-206ENST00000553830 MINPP1Q9UNW1 487 aa17.36■□□□□ 0.37
PRKCH-206ENST00000553830 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
PRKCH-206ENST00000553830 SNAP23O00161 211 aa17.35■□□□□ 0.37
PRKCH-206ENST00000553830 BBOX1O75936 387 aa17.35■□□□□ 0.37
PRKCH-206ENST00000553830 KCNJ4P48050 445 aa17.35■□□□□ 0.37
PRKCH-206ENST00000553830 ATP2B3Q16720 1220 aa17.35■□□□□ 0.37
PRKCH-206ENST00000553830 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
PRKCH-206ENST00000553830 OLFM4Q6UX06 510 aa17.35■□□□□ 0.37
PRKCH-206ENST00000553830 CNKSR1Q969H4 720 aa17.35■□□□□ 0.37
PRKCH-206ENST00000553830 ANKIB1Q9P2G1 1089 aa17.35■□□□□ 0.37
PRKCH-206ENST00000553830 ARAP2Q8WZ64 1704 aa17.35■□□□□ 0.37
PRKCH-206ENST00000553830 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
PRKCH-206ENST00000553830 TIMM10P62072 90 aa17.34■□□□□ 0.37
PRKCH-206ENST00000553830 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
PRKCH-206ENST00000553830 A0A1B0GUL7 405 aa17.33■□□□□ 0.36
PRKCH-206ENST00000553830 PDE8BO95263 885 aa17.33■□□□□ 0.36
PRKCH-206ENST00000553830 ADORA1P30542 326 aa17.33■□□□□ 0.36
PRKCH-206ENST00000553830 GPSM2P81274 684 aa17.33■□□□□ 0.36
PRKCH-206ENST00000553830 PUM3Q15397 648 aaKnown RBP17.33■□□□□ 0.36
PRKCH-206ENST00000553830 VGLL2Q8N8G2 317 aa17.33■□□□□ 0.36
PRKCH-206ENST00000553830 DBNDD2Q9BQY9 259 aa17.33■□□□□ 0.36
PRKCH-206ENST00000553830 CD2APQ9Y5K6 639 aa17.33■□□□□ 0.36
PRKCH-206ENST00000553830 AK9Q5TCS8 1911 aa17.33■□□□□ 0.36
PRKCH-206ENST00000553830 WTIPA6NIX2 430 aaPredicted RBP17.32■□□□□ 0.36
PRKCH-206ENST00000553830 SLC5A1P13866 664 aa17.32■□□□□ 0.36
PRKCH-206ENST00000553830 MX1P20591 662 aa17.32■□□□□ 0.36
PRKCH-206ENST00000553830 TGFB2P61812 414 aa17.32■□□□□ 0.36
PRKCH-206ENST00000553830 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
PRKCH-206ENST00000553830 PLEKHM2Q8IWE5 1019 aa17.32■□□□□ 0.36
PRKCH-206ENST00000553830 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
PRKCH-206ENST00000553830 ANKRD2Q9GZV1 360 aa17.32■□□□□ 0.36
PRKCH-206ENST00000553830 TMX4Q9H1E5 349 aaPredicted RBP17.32■□□□□ 0.36
PRKCH-206ENST00000553830 NSFL1CQ9UNZ2 370 aaKnown RBP17.32■□□□□ 0.36
PRKCH-206ENST00000553830 MYH13Q9UKX3 1938 aa17.31■□□□□ 0.36
PRKCH-206ENST00000553830 TTLL6Q8N841 843 aa17.31■□□□□ 0.36
PRKCH-206ENST00000553830 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
PRKCH-206ENST00000553830 DBNLQ9UJU6 430 aaKnown RBP17.31■□□□□ 0.36
PRKCH-206ENST00000553830 ATP6V0A2Q9Y487 856 aa17.31■□□□□ 0.36
PRKCH-206ENST00000553830 XDHP47989 1333 aa17.3■□□□□ 0.36
PRKCH-206ENST00000553830 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
PRKCH-206ENST00000553830 KCNA3P22001 575 aa17.3■□□□□ 0.36
PRKCH-206ENST00000553830 TMC4Q7Z404 712 aa17.3■□□□□ 0.36
PRKCH-206ENST00000553830 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
PRKCH-206ENST00000553830 XAGE2Q96GT9 111 aa17.3■□□□□ 0.36
PRKCH-206ENST00000553830 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
PRKCH-206ENST00000553830 FHDC1Q9C0D6 1143 aaPredicted RBP17.3■□□□□ 0.36
PRKCH-206ENST00000553830 GPR108Q9NPR9 543 aa17.3■□□□□ 0.36
PRKCH-206ENST00000553830 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
PRKCH-206ENST00000553830 C21orf2O43822 256 aa17.29■□□□□ 0.36
PRKCH-206ENST00000553830 UFL1O94874 794 aa17.29■□□□□ 0.36
PRKCH-206ENST00000553830 PDE1AP54750 535 aa17.29■□□□□ 0.36
PRKCH-206ENST00000553830 LPIN2Q92539 896 aa17.29■□□□□ 0.36
PRKCH-206ENST00000553830 LTBP1Q14766 1721 aa17.29■□□□□ 0.36
PRKCH-206ENST00000553830 ZNF804BA4D1E1 1349 aa17.28■□□□□ 0.36
PRKCH-206ENST00000553830 C6orf229H3BNL8 230 aa17.28■□□□□ 0.36
PRKCH-206ENST00000553830 FGFR2P21802 821 aa17.28■□□□□ 0.36
PRKCH-206ENST00000553830 KLRK1P26718 216 aa17.28■□□□□ 0.36
PRKCH-206ENST00000553830 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
PRKCH-206ENST00000553830 MPNDQ8N594 471 aa17.28■□□□□ 0.36
PRKCH-206ENST00000553830 GGA1Q9UJY5 639 aa17.28■□□□□ 0.36
PRKCH-206ENST00000553830 SALL3Q9BXA9 1300 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms