RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 XDHP47989 1333 aa12.91□□□□□ -0.34
HNRNPC-208ENST00000553753 UFL1O94874 794 aa12.91□□□□□ -0.34
HNRNPC-208ENST00000553753 ZC3H12CQ9C0D7 883 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-208ENST00000553753 MINPP1Q9UNW1 487 aa12.91□□□□□ -0.34
HNRNPC-208ENST00000553753 PCNTO95613 3336 aa12.9□□□□□ -0.34
HNRNPC-208ENST00000553753 LTBP1Q14766 1721 aa12.9□□□□□ -0.34
HNRNPC-208ENST00000553753 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-208ENST00000553753 EPHX2P34913 555 aa12.9□□□□□ -0.34
HNRNPC-208ENST00000553753 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
HNRNPC-208ENST00000553753 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-208ENST00000553753 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
HNRNPC-208ENST00000553753 ANKRD18BA2A2Z9 1011 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 YDJCA8MPS7 323 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 RAD17O75943 681 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 SCNN1DP51172 638 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 IFIT5Q13325 482 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 TNIP1Q15025 636 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 EPHA10Q5JZY3 1008 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 CIAPIN1Q6FI81 312 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 LMBR1LQ6UX01 489 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 PNMA8AQ86V59 439 aaPredicted RBP12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 GPR101Q96P66 508 aaPredicted RBP12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 UTYO14607 1347 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 APLP1P51693 650 aa12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 EAPPQ56P03 285 aaPredicted RBP12.89□□□□□ -0.35
HNRNPC-208ENST00000553753 EPS15P42566 896 aa12.88□□□□□ -0.35
HNRNPC-208ENST00000553753 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
HNRNPC-208ENST00000553753 CCDC57Q2TAC2 916 aa12.88□□□□□ -0.35
HNRNPC-208ENST00000553753 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
HNRNPC-208ENST00000553753 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
HNRNPC-208ENST00000553753 G3V3G9 751 aa12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 ECE2O60344 883 aa12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 SUCLG2Q96I99 432 aa12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 ANKRD2Q9GZV1 360 aa12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 USP44Q9H0E7 712 aa12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 GPRC5DQ9NZD1 345 aa12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 SPEF2Q9C093 1822 aa12.87□□□□□ -0.35
HNRNPC-208ENST00000553753 WTIPA6NIX2 430 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 GMPSP49915 693 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 API5Q9BZZ5 524 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 LEMD3Q9Y2U8 911 aa12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 TAF7LQ5H9L4 462 aa12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 ARHGAP45Q92619 1136 aa12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 KCNQ5Q9NR82 932 aa12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 KIF16BQ96L93 1317 aa12.86□□□□□ -0.35
HNRNPC-208ENST00000553753 PSMD14O00487 310 aa12.85□□□□□ -0.35
HNRNPC-208ENST00000553753 CHRNDQ07001 517 aa12.85□□□□□ -0.35
HNRNPC-208ENST00000553753 LDHAL6AQ6ZMR3 332 aa12.85□□□□□ -0.35
HNRNPC-208ENST00000553753 USP50Q70EL3 339 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-208ENST00000553753 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-208ENST00000553753 ADARB2Q9NS39 739 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-208ENST00000553753 RABL6Q3YEC7 729 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 ZNF804BA4D1E1 1349 aa12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 MED23Q9ULK4 1368 aa12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 IPO8O15397 1037 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 BCAR3O75815 825 aa12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 DPF2Q92785 391 aa12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 CNNM1Q9NRU3 951 aa12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 CNOT7Q9UIV1 285 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-208ENST00000553753 H7C1D1 291 aa12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 TAF5LO75529 589 aa12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 VIL1P09327 827 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 RPS12P25398 132 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 KCNJ4P48050 445 aa12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 HTRA3P83110 453 aa12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 CNTROBQ8N137 903 aa12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 ANKRD44Q8N8A2 993 aa12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 HELBQ8NG08 1087 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-208ENST00000553753 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-208ENST00000553753 SCN9AQ15858 1988 aa12.82□□□□□ -0.36
HNRNPC-208ENST00000553753 MAP1SQ66K74 1059 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-208ENST00000553753 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
HNRNPC-208ENST00000553753 ADAMTSL1Q8N6G6 1762 aa12.82□□□□□ -0.36
HNRNPC-208ENST00000553753 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-208ENST00000553753 COA1Q9GZY4 146 aa12.82□□□□□ -0.36
HNRNPC-208ENST00000553753 UBTFL1P0CB47 393 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 DNAJC5GQ8N7S2 189 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 PASKQ96RG2 1323 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 SHTN1A0MZ66 631 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 USP17L3A6NCW0 530 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 USP17L4A6NCW7 530 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 SNAP23O00161 211 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 PLIN1O60240 522 aa12.81□□□□□ -0.36
HNRNPC-208ENST00000553753 TRIM27P14373 513 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms