RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 SP8Q8IXZ3 490 aa22.42■■□□□ 1.18
PSEN1-208ENST00000553719 TAF7LQ5H9L4 462 aa22.41■■□□□ 1.18
PSEN1-208ENST00000553719 MINPP1Q9UNW1 487 aa22.41■■□□□ 1.18
PSEN1-208ENST00000553719 OLFM4Q6UX06 510 aa22.4■■□□□ 1.18
PSEN1-208ENST00000553719 VGLL2Q8N8G2 317 aa22.4■■□□□ 1.18
PSEN1-208ENST00000553719 MPHOSPH8Q99549 860 aa22.4■■□□□ 1.18
PSEN1-208ENST00000553719 SIL1Q9H173 461 aa22.4■■□□□ 1.18
PSEN1-208ENST00000553719 DCTPP1Q9H773 170 aa22.4■■□□□ 1.18
PSEN1-208ENST00000553719 FER1L6Q2WGJ9 1857 aa22.39■■□□□ 1.18
PSEN1-208ENST00000553719 UTRNP46939 3433 aa22.39■■□□□ 1.18
PSEN1-208ENST00000553719 IGHDP01880 384 aa22.39■■□□□ 1.17
PSEN1-208ENST00000553719 SURF6O75683 361 aaKnown RBP22.38■■□□□ 1.17
PSEN1-208ENST00000553719 IL15P40933 162 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-208ENST00000553719 CHRNDQ07001 517 aa22.38■■□□□ 1.17
PSEN1-208ENST00000553719 CNNM1Q9NRU3 951 aa22.38■■□□□ 1.17
PSEN1-208ENST00000553719 PODXL2Q9NZ53 605 aa22.38■■□□□ 1.17
PSEN1-208ENST00000553719 WWC3Q9ULE0 1092 aa22.38■■□□□ 1.17
PSEN1-208ENST00000553719 EXOC6BQ9Y2D4 811 aa22.38■■□□□ 1.17
PSEN1-208ENST00000553719 MROH5Q6ZUA9 1318 aa22.37■■□□□ 1.17
PSEN1-208ENST00000553719 SASH1O94885 1247 aa22.37■■□□□ 1.17
PSEN1-208ENST00000553719 CC2D2BQ6DHV5 1058 aa22.37■■□□□ 1.17
PSEN1-208ENST00000553719 BCS1LQ9Y276 419 aa22.37■■□□□ 1.17
PSEN1-208ENST00000553719 C21orf2O43822 256 aa22.36■■□□□ 1.17
PSEN1-208ENST00000553719 RWDD1Q9H446 243 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-208ENST00000553719 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-208ENST00000553719 YBX3P16989 372 aaKnown RBP eCLIP22.35■■□□□ 1.17
PSEN1-208ENST00000553719 GPSM2P81274 684 aa22.35■■□□□ 1.17
PSEN1-208ENST00000553719 G3BP1Q13283 466 aaKnown RBP eCLIP22.35■■□□□ 1.17
PSEN1-208ENST00000553719 SMC5Q8IY18 1101 aa22.35■■□□□ 1.17
PSEN1-208ENST00000553719 ARAP2Q8WZ64 1704 aa22.34■■□□□ 1.17
PSEN1-208ENST00000553719 XDHP47989 1333 aa22.34■■□□□ 1.17
PSEN1-208ENST00000553719 KDM2BQ8NHM5 1336 aa22.34■■□□□ 1.17
PSEN1-208ENST00000553719 CCDC93Q567U6 631 aa22.34■■□□□ 1.17
PSEN1-208ENST00000553719 HSP90AB4PQ58FF6 505 aa22.34■■□□□ 1.17
PSEN1-208ENST00000553719 SOGA3Q5TF21 947 aa22.34■■□□□ 1.17
PSEN1-208ENST00000553719 RTFDC1Q9BY42 306 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-208ENST00000553719 ANKRD2Q9GZV1 360 aa22.34■■□□□ 1.17
PSEN1-208ENST00000553719 IRS2Q9Y4H2 1338 aa22.33■■□□□ 1.17
PSEN1-208ENST00000553719 RAB11FIP3O75154 756 aa22.33■■□□□ 1.17
PSEN1-208ENST00000553719 PDE8BO95263 885 aa22.33■■□□□ 1.17
PSEN1-208ENST00000553719 GRIPAP1Q4V328 841 aa22.33■■□□□ 1.17
PSEN1-208ENST00000553719 GCC1Q96CN9 775 aa22.33■■□□□ 1.17
PSEN1-208ENST00000553719 ZNF219Q9P2Y4 722 aaPredicted RBP22.33■■□□□ 1.17
PSEN1-208ENST00000553719 ZNF609O15014 1411 aa22.32■■□□□ 1.16
PSEN1-208ENST00000553719 FGFR2P21802 821 aa22.32■■□□□ 1.16
PSEN1-208ENST00000553719 TFCP2Q12800 502 aa22.32■■□□□ 1.16
PSEN1-208ENST00000553719 METTL24Q5JXM2 366 aa22.32■■□□□ 1.16
PSEN1-208ENST00000553719 ERC1Q8IUD2 1116 aa22.32■■□□□ 1.16
PSEN1-208ENST00000553719 HELBQ8NG08 1087 aaPredicted RBP22.32■■□□□ 1.16
PSEN1-208ENST00000553719 WTIPA6NIX2 430 aaPredicted RBP22.31■■□□□ 1.16
PSEN1-208ENST00000553719 TAF5LO75529 589 aa22.31■■□□□ 1.16
PSEN1-208ENST00000553719 RTKN2Q8IZC4 609 aa22.31■■□□□ 1.16
PSEN1-208ENST00000553719 TBC1D16Q8TBP0 767 aa22.31■■□□□ 1.16
PSEN1-208ENST00000553719 RHPN1Q8TCX5 695 aa22.31■■□□□ 1.16
PSEN1-208ENST00000553719 PSMD1Q99460 953 aa22.31■■□□□ 1.16
PSEN1-208ENST00000553719 GPR108Q9NPR9 543 aa22.31■■□□□ 1.16
PSEN1-208ENST00000553719 PPP4R2Q9NY27 417 aa22.31■■□□□ 1.16
PSEN1-208ENST00000553719 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
PSEN1-208ENST00000553719 NFKBIEO00221 500 aa22.3■■□□□ 1.16
PSEN1-208ENST00000553719 MPNDQ8N594 471 aa22.3■■□□□ 1.16
PSEN1-208ENST00000553719 KIF1BPQ96EK5 621 aa22.3■■□□□ 1.16
PSEN1-208ENST00000553719 CEP126Q9P2H0 1117 aa22.3■■□□□ 1.16
PSEN1-208ENST00000553719 POLLQ9UGP5 575 aa22.3■■□□□ 1.16
PSEN1-208ENST00000553719 NSFL1CQ9UNZ2 370 aaKnown RBP22.3■■□□□ 1.16
PSEN1-208ENST00000553719 LEMD3Q9Y2U8 911 aa22.3■■□□□ 1.16
PSEN1-208ENST00000553719 SNAP23O00161 211 aa22.29■■□□□ 1.16
PSEN1-208ENST00000553719 OS9Q13438 667 aaPredicted RBP22.29■■□□□ 1.16
PSEN1-208ENST00000553719 DPP8Q6V1X1 898 aaPredicted RBP22.29■■□□□ 1.16
PSEN1-208ENST00000553719 ANKIB1Q9P2G1 1089 aa22.29■■□□□ 1.16
PSEN1-208ENST00000553719 ATP2B4P23634 1241 aa22.28■■□□□ 1.16
PSEN1-208ENST00000553719 UBE4AQ14139 1066 aa22.28■■□□□ 1.16
PSEN1-208ENST00000553719 PUM3Q15397 648 aaKnown RBP22.28■■□□□ 1.16
PSEN1-208ENST00000553719 TMX4Q9H1E5 349 aaPredicted RBP22.28■■□□□ 1.16
PSEN1-208ENST00000553719 GGA1Q9UJY5 639 aa22.28■■□□□ 1.16
PSEN1-208ENST00000553719 ZNF804BA4D1E1 1349 aa22.28■■□□□ 1.16
PSEN1-208ENST00000553719 MED23Q9ULK4 1368 aa22.27■■□□□ 1.16
PSEN1-208ENST00000553719 UFL1O94874 794 aa22.27■■□□□ 1.16
PSEN1-208ENST00000553719 FKBP4Q02790 459 aaKnown RBP eCLIP22.27■■□□□ 1.16
PSEN1-208ENST00000553719 TNNI3KQ59H18 835 aa22.27■■□□□ 1.16
PSEN1-208ENST00000553719 C15orf52Q6ZUT6 534 aaKnown RBP22.27■■□□□ 1.16
PSEN1-208ENST00000553719 LRRCC1Q9C099 1032 aa22.27■■□□□ 1.16
PSEN1-208ENST00000553719 FPGT-TNNI3KV9GXZ4 949 aa22.27■■□□□ 1.16
PSEN1-208ENST00000553719 ATP2B3Q16720 1220 aa22.26■■□□□ 1.15
PSEN1-208ENST00000553719 COL4A5P29400 1685 aa22.26■■□□□ 1.15
PSEN1-208ENST00000553719 APBB1O00213 710 aa22.25■■□□□ 1.15
PSEN1-208ENST00000553719 KLRK1P26718 216 aa22.25■■□□□ 1.15
PSEN1-208ENST00000553719 PRELPP51888 382 aa22.25■■□□□ 1.15
PSEN1-208ENST00000553719 B4GALNT3Q6L9W6 998 aa22.25■■□□□ 1.15
PSEN1-208ENST00000553719 LPIN2Q92539 896 aa22.25■■□□□ 1.15
PSEN1-208ENST00000553719 EAF2Q96CJ1 260 aaPredicted RBP22.25■■□□□ 1.15
PSEN1-208ENST00000553719 CCDC136Q96JN2 1154 aa22.25■■□□□ 1.15
PSEN1-208ENST00000553719 TAOK3Q9H2K8 898 aa22.25■■□□□ 1.15
PSEN1-208ENST00000553719 IL1RAPL2Q9NP60 686 aa22.25■■□□□ 1.15
PSEN1-208ENST00000553719 SBF1O95248 1867 aa22.25■■□□□ 1.15
PSEN1-208ENST00000553719 A0A1B0GUL7 405 aa22.24■■□□□ 1.15
PSEN1-208ENST00000553719 CENPQQ7L2Z9 268 aaPredicted RBP22.24■■□□□ 1.15
PSEN1-208ENST00000553719 TXNRD3Q86VQ6 643 aa22.24■■□□□ 1.15
PSEN1-208ENST00000553719 GPR101Q96P66 508 aaPredicted RBP22.24■■□□□ 1.15
PSEN1-208ENST00000553719 AKAP2Q9Y2D5 859 aa22.24■■□□□ 1.15
PSEN1-208ENST00000553719 SMARCA5O60264 1052 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms