RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 AOC2O75106 756 aa20.38■□□□□ 0.85
ACTN1-209ENST00000553659 MICALL2Q8IY33 904 aa20.38■□□□□ 0.85
ACTN1-209ENST00000553659 ABHD8Q96I13 439 aa20.38■□□□□ 0.85
ACTN1-209ENST00000553659 ZBTB12Q9Y330 459 aaPredicted RBP20.38■□□□□ 0.85
ACTN1-209ENST00000553659 C6orf229H3BNL8 230 aa20.37■□□□□ 0.85
ACTN1-209ENST00000553659 PSMD14O00487 310 aa20.37■□□□□ 0.85
ACTN1-209ENST00000553659 IRS4O14654 1257 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-209ENST00000553659 GPSM2P81274 684 aa20.37■□□□□ 0.85
ACTN1-209ENST00000553659 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-209ENST00000553659 ZNF408Q9H9D4 720 aa20.37■□□□□ 0.85
ACTN1-209ENST00000553659 DBNDD1Q9H9R9 158 aa20.37■□□□□ 0.85
ACTN1-209ENST00000553659 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
ACTN1-209ENST00000553659 POLLQ9UGP5 575 aa20.37■□□□□ 0.85
ACTN1-209ENST00000553659 COL4A1P02462 1669 aa20.36■□□□□ 0.85
ACTN1-209ENST00000553659 RIMBP2O15034 1052 aa20.36■□□□□ 0.85
ACTN1-209ENST00000553659 RPS8P62241 208 aaKnown RBP20.36■□□□□ 0.85
ACTN1-209ENST00000553659 EYA3Q99504 573 aa20.36■□□□□ 0.85
ACTN1-209ENST00000553659 ZNF853P0CG23 659 aa20.35■□□□□ 0.85
ACTN1-209ENST00000553659 SAMD7Q7Z3H4 446 aa20.35■□□□□ 0.85
ACTN1-209ENST00000553659 RIC3Q7Z5B4 369 aa20.35■□□□□ 0.85
ACTN1-209ENST00000553659 USP48Q86UV5 1035 aa20.35■□□□□ 0.85
ACTN1-209ENST00000553659 CASP8AP2Q9UKL3 1982 aa20.35■□□□□ 0.85
ACTN1-209ENST00000553659 CA12O43570 354 aa20.34■□□□□ 0.85
ACTN1-209ENST00000553659 RPS12P25398 132 aaKnown RBP20.34■□□□□ 0.85
ACTN1-209ENST00000553659 ZBTB38Q8NAP3 1195 aaPredicted RBP20.34■□□□□ 0.85
ACTN1-209ENST00000553659 MYH16Q9H6N6 1097 aa20.34■□□□□ 0.85
ACTN1-209ENST00000553659 SCN9AQ15858 1988 aa20.34■□□□□ 0.85
ACTN1-209ENST00000553659 ECE2O60344 883 aa20.33■□□□□ 0.85
ACTN1-209ENST00000553659 HSP90B1P14625 803 aaKnown RBP20.33■□□□□ 0.85
ACTN1-209ENST00000553659 BRPF1P55201 1214 aaPredicted RBP20.33■□□□□ 0.85
ACTN1-209ENST00000553659 DOK7Q18PE1 504 aa20.33■□□□□ 0.85
ACTN1-209ENST00000553659 TBC1D16Q8TBP0 767 aa20.33■□□□□ 0.85
ACTN1-209ENST00000553659 KCNQ5Q9NR82 932 aa20.33■□□□□ 0.85
ACTN1-209ENST00000553659 TSKSQ9UJT2 592 aa20.33■□□□□ 0.85
ACTN1-209ENST00000553659 IL16Q14005 1332 aa20.32■□□□□ 0.84
ACTN1-209ENST00000553659 TBC1D10BQ4KMP7 808 aaPredicted RBP20.32■□□□□ 0.84
ACTN1-209ENST00000553659 ZC3H12CQ9C0D7 883 aaKnown RBP20.32■□□□□ 0.84
ACTN1-209ENST00000553659 PHAXQ9H814 394 aaKnown RBP20.32■□□□□ 0.84
ACTN1-209ENST00000553659 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
ACTN1-209ENST00000553659 PODXL2Q9NZ53 605 aa20.32■□□□□ 0.84
ACTN1-209ENST00000553659 CT47B1P0C2W7 299 aaPredicted RBP20.31■□□□□ 0.84
ACTN1-209ENST00000553659 GNAI1P63096 354 aa20.31■□□□□ 0.84
ACTN1-209ENST00000553659 RTL9Q8NET4 1388 aa20.31■□□□□ 0.84
ACTN1-209ENST00000553659 ELL2O00472 640 aaPredicted RBP20.3■□□□□ 0.84
ACTN1-209ENST00000553659 EGFRP00533 1210 aa20.3■□□□□ 0.84
ACTN1-209ENST00000553659 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
ACTN1-209ENST00000553659 RBM26Q5T8P6 1007 aaKnown RBP20.3■□□□□ 0.84
ACTN1-209ENST00000553659 KRT26Q7Z3Y9 468 aa20.3■□□□□ 0.84
ACTN1-209ENST00000553659 CCDC191Q8NCU4 936 aa20.3■□□□□ 0.84
ACTN1-209ENST00000553659 SEC31BQ9NQW1 1179 aa20.3■□□□□ 0.84
ACTN1-209ENST00000553659 VIL1P09327 827 aaKnown RBP20.29■□□□□ 0.84
ACTN1-209ENST00000553659 HUNKP57058 714 aa20.29■□□□□ 0.84
ACTN1-209ENST00000553659 NOGQ13253 232 aa20.29■□□□□ 0.84
ACTN1-209ENST00000553659 DLK2Q6UY11 383 aa20.29■□□□□ 0.84
ACTN1-209ENST00000553659 DCPSQ96C86 337 aaKnown RBP20.29■□□□□ 0.84
ACTN1-209ENST00000553659 MYD88Q99836 296 aa20.29■□□□□ 0.84
ACTN1-209ENST00000553659 PSME4Q14997 1843 aa20.29■□□□□ 0.84
ACTN1-209ENST00000553659 G3V3G9 751 aa20.28■□□□□ 0.84
ACTN1-209ENST00000553659 PDE8AO60658 829 aa20.28■□□□□ 0.84
ACTN1-209ENST00000553659 PCCAP05165 728 aaPredicted RBP20.28■□□□□ 0.84
ACTN1-209ENST00000553659 CCDC152Q4G0S7 254 aa20.28■□□□□ 0.84
ACTN1-209ENST00000553659 DCAF8Q5TAQ9 597 aa20.28■□□□□ 0.84
ACTN1-209ENST00000553659 CCDC136Q96JN2 1154 aa20.28■□□□□ 0.84
ACTN1-209ENST00000553659 ANKIB1Q9P2G1 1089 aa20.28■□□□□ 0.84
ACTN1-209ENST00000553659 CCDC85CA6NKD9 419 aa20.27■□□□□ 0.84
ACTN1-209ENST00000553659 UFL1O94874 794 aa20.27■□□□□ 0.84
ACTN1-209ENST00000553659 C2orf69Q8N8R5 385 aa20.27■□□□□ 0.84
ACTN1-209ENST00000553659 ZIC5Q96T25 663 aa20.27■□□□□ 0.84
ACTN1-209ENST00000553659 CHMP4AQ9BY43 222 aa20.27■□□□□ 0.84
ACTN1-209ENST00000553659 GBA2Q9HCG7 927 aaPredicted RBP20.27■□□□□ 0.84
ACTN1-209ENST00000553659 CWC25Q9NXE8 425 aaPredicted RBP20.27■□□□□ 0.84
ACTN1-209ENST00000553659 GGA1Q9UJY5 639 aa20.27■□□□□ 0.84
ACTN1-209ENST00000553659 AKAP11Q9UKA4 1901 aa20.26■□□□□ 0.83
ACTN1-209ENST00000553659 KIF4BQ2VIQ3 1234 aa20.26■□□□□ 0.83
ACTN1-209ENST00000553659 RGMBQ6NW40 437 aa20.26■□□□□ 0.83
ACTN1-209ENST00000553659 C8orf58Q8NAV2 365 aa20.26■□□□□ 0.83
ACTN1-209ENST00000553659 METTL22Q9BUU2 404 aaPredicted RBP20.26■□□□□ 0.83
ACTN1-209ENST00000553659 MYH3P11055 1940 aa20.25■□□□□ 0.83
ACTN1-209ENST00000553659 ADM5C9JUS6 153 aa20.25■□□□□ 0.83
ACTN1-209ENST00000553659 DDX58O95786 925 aaKnown RBP20.25■□□□□ 0.83
ACTN1-209ENST00000553659 CCDC30Q5VVM6 783 aa20.25■□□□□ 0.83
ACTN1-209ENST00000553659 JARID2Q92833 1246 aaPredicted RBP20.25■□□□□ 0.83
ACTN1-209ENST00000553659 FAM155AB1AL88 458 aaPredicted RBP20.24■□□□□ 0.83
ACTN1-209ENST00000553659 ANKRD18AQ8IVF6 992 aa20.24■□□□□ 0.83
ACTN1-209ENST00000553659 SULF1Q8IWU6 871 aa20.24■□□□□ 0.83
ACTN1-209ENST00000553659 AGBL3Q8NEM8 1001 aa20.24■□□□□ 0.83
ACTN1-209ENST00000553659 CCDC102AQ96A19 550 aa20.24■□□□□ 0.83
ACTN1-209ENST00000553659 SPINK5Q9NQ38 1064 aaPredicted RBP20.24■□□□□ 0.83
ACTN1-209ENST00000553659 ZNF609O15014 1411 aa20.23■□□□□ 0.83
ACTN1-209ENST00000553659 FAM161AQ3B820 660 aa20.23■□□□□ 0.83
ACTN1-209ENST00000553659 B4GALNT3Q6L9W6 998 aa20.23■□□□□ 0.83
ACTN1-209ENST00000553659 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
ACTN1-209ENST00000553659 MCOLN1Q9GZU1 580 aa20.23■□□□□ 0.83
ACTN1-209ENST00000553659 GGA3Q9NZ52 723 aa20.23■□□□□ 0.83
ACTN1-209ENST00000553659 RGS19P49795 217 aa20.22■□□□□ 0.83
ACTN1-209ENST00000553659 ZNF280AP59817 542 aaPredicted RBP20.22■□□□□ 0.83
ACTN1-209ENST00000553659 RSBN1LQ6PCB5 846 aaPredicted RBP20.22■□□□□ 0.83
ACTN1-209ENST00000553659 XDHP47989 1333 aa20.22■□□□□ 0.83
ACTN1-209ENST00000553659 SPEF2Q9C093 1822 aa20.21■□□□□ 0.83
ACTN1-209ENST00000553659 ATP2B4P23634 1241 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms