RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 CENPFP49454 3210 aa12.75□□□□□ -0.37
CHD8-205ENST00000553651 SH3TC1Q8TE82 1336 aa12.74□□□□□ -0.37
CHD8-205ENST00000553651 GPR25O00155 361 aa12.74□□□□□ -0.37
CHD8-205ENST00000553651 TM4SF4P48230 202 aa12.74□□□□□ -0.37
CHD8-205ENST00000553651 TCIRG1Q13488 830 aa12.74□□□□□ -0.37
CHD8-205ENST00000553651 ANGEL2Q5VTE6 544 aaKnown RBP12.74□□□□□ -0.37
CHD8-205ENST00000553651 PLEKHF1Q96S99 279 aa12.74□□□□□ -0.37
CHD8-205ENST00000553651 CFHR5Q9BXR6 569 aa12.74□□□□□ -0.37
CHD8-205ENST00000553651 TRMT112Q9UI30 125 aaKnown RBP12.74□□□□□ -0.37
CHD8-205ENST00000553651 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
CHD8-205ENST00000553651 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
CHD8-205ENST00000553651 PSME4Q14997 1843 aa12.74□□□□□ -0.37
CHD8-205ENST00000553651 KIAA0100Q14667 2235 aaKnown RBP12.73□□□□□ -0.37
CHD8-205ENST00000553651 FXR1P51114 621 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHD8-205ENST00000553651 SCARF1Q14162 830 aa12.73□□□□□ -0.37
CHD8-205ENST00000553651 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
CHD8-205ENST00000553651 TBC1D16Q8TBP0 767 aa12.73□□□□□ -0.37
CHD8-205ENST00000553651 GMLQ99445 158 aa12.73□□□□□ -0.37
CHD8-205ENST00000553651 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
CHD8-205ENST00000553651 C6orf229H3BNL8 230 aa12.72□□□□□ -0.37
CHD8-205ENST00000553651 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
CHD8-205ENST00000553651 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
CHD8-205ENST00000553651 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
CHD8-205ENST00000553651 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
CHD8-205ENST00000553651 PCGF6Q9BYE7 350 aa12.72□□□□□ -0.37
CHD8-205ENST00000553651 BRCA2P51587 3418 aa12.72□□□□□ -0.37
CHD8-205ENST00000553651 POTEFA5A3E0 1075 aa12.71□□□□□ -0.37
CHD8-205ENST00000553651 UBE2Q2LH0YL09 131 aa12.71□□□□□ -0.37
CHD8-205ENST00000553651 EIF2S2P20042 333 aaKnown RBP12.71□□□□□ -0.37
CHD8-205ENST00000553651 NFE2L2Q16236 605 aa12.71□□□□□ -0.37
CHD8-205ENST00000553651 PODXL2Q9NZ53 605 aa12.71□□□□□ -0.37
CHD8-205ENST00000553651 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.37
CHD8-205ENST00000553651 RBBP6Q7Z6E9 1792 aaKnown RBP12.71□□□□□ -0.38
CHD8-205ENST00000553651 ZNF646O15015 1829 aaPredicted RBP12.7□□□□□ -0.38
CHD8-205ENST00000553651 RSBN1LQ6PCB5 846 aaPredicted RBP12.7□□□□□ -0.38
CHD8-205ENST00000553651 AGBL3Q8NEM8 1001 aa12.7□□□□□ -0.38
CHD8-205ENST00000553651 EYA3Q99504 573 aa12.7□□□□□ -0.38
CHD8-205ENST00000553651 CEP290O15078 2479 aa12.7□□□□□ -0.38
CHD8-205ENST00000553651 FKTNO75072 461 aa12.69□□□□□ -0.38
CHD8-205ENST00000553651 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
CHD8-205ENST00000553651 PRAMEF18Q5VWM3 479 aa12.69□□□□□ -0.38
CHD8-205ENST00000553651 ISCA1Q9BUE6 129 aa12.69□□□□□ -0.38
CHD8-205ENST00000553651 TRIOBPQ9H2D6 2365 aa12.69□□□□□ -0.38
CHD8-205ENST00000553651 NECTIN2Q92692 538 aa12.68□□□□□ -0.38
CHD8-205ENST00000553651 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
CHD8-205ENST00000553651 MYOZ2Q9NPC6 264 aa12.68□□□□□ -0.38
CHD8-205ENST00000553651 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
CHD8-205ENST00000553651 SZT2Q5T011 3432 aa12.68□□□□□ -0.38
CHD8-205ENST00000553651 RPS8P62241 208 aaKnown RBP12.67□□□□□ -0.38
CHD8-205ENST00000553651 ZC3H12CQ9C0D7 883 aaKnown RBP12.67□□□□□ -0.38
CHD8-205ENST00000553651 LAMB1P07942 1786 aa12.66□□□□□ -0.38
CHD8-205ENST00000553651 USP17L8P0C7I0 530 aa12.66□□□□□ -0.38
CHD8-205ENST00000553651 PTPN12Q05209 780 aaKnown RBP12.66□□□□□ -0.38
CHD8-205ENST00000553651 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
CHD8-205ENST00000553651 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
CHD8-205ENST00000553651 OTOP1Q7RTM1 612 aa12.66□□□□□ -0.38
CHD8-205ENST00000553651 SEC31BQ9NQW1 1179 aa12.66□□□□□ -0.38
CHD8-205ENST00000553651 UFL1O94874 794 aa12.65□□□□□ -0.38
CHD8-205ENST00000553651 SREBF2Q12772 1141 aa12.65□□□□□ -0.38
CHD8-205ENST00000553651 KRT24Q2M2I5 525 aa12.65□□□□□ -0.38
CHD8-205ENST00000553651 LDLRAD1Q5T700 205 aa12.65□□□□□ -0.38
CHD8-205ENST00000553651 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
CHD8-205ENST00000553651 PLBD2Q8NHP8 589 aa12.65□□□□□ -0.38
CHD8-205ENST00000553651 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.38
CHD8-205ENST00000553651 RANBP2P49792 3224 aaKnown RBP12.64□□□□□ -0.39
CHD8-205ENST00000553651 WTIPA6NIX2 430 aaPredicted RBP12.64□□□□□ -0.39
CHD8-205ENST00000553651 ATP5J2-PTCD1G3V325 749 aa12.64□□□□□ -0.39
CHD8-205ENST00000553651 CAP1Q01518 475 aa12.64□□□□□ -0.39
CHD8-205ENST00000553651 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
CHD8-205ENST00000553651 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
CHD8-205ENST00000553651 GGA1Q9UJY5 639 aa12.64□□□□□ -0.39
CHD8-205ENST00000553651 TRIM17Q9Y577 477 aa12.64□□□□□ -0.39
CHD8-205ENST00000553651 USP17L3A6NCW0 530 aa12.63□□□□□ -0.39
CHD8-205ENST00000553651 USP17L4A6NCW7 530 aa12.63□□□□□ -0.39
CHD8-205ENST00000553651 WNT10BO00744 389 aa12.63□□□□□ -0.39
CHD8-205ENST00000553651 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
CHD8-205ENST00000553651 EN2P19622 333 aaPredicted RBP12.63□□□□□ -0.39
CHD8-205ENST00000553651 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
CHD8-205ENST00000553651 USP17L1Q7RTZ2 530 aa12.63□□□□□ -0.39
CHD8-205ENST00000553651 ARMC5Q96C12 935 aa12.63□□□□□ -0.39
CHD8-205ENST00000553651 CHPF2Q9P2E5 772 aa12.63□□□□□ -0.39
CHD8-205ENST00000553651 COLQQ9Y215 455 aaPredicted RBP12.63□□□□□ -0.39
CHD8-205ENST00000553651 DACT2Q5SW24 774 aa12.62□□□□□ -0.39
CHD8-205ENST00000553651 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
CHD8-205ENST00000553651 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
CHD8-205ENST00000553651 MXD3Q9BW11 206 aa12.62□□□□□ -0.39
CHD8-205ENST00000553651 PTPN22Q9Y2R2 807 aa12.62□□□□□ -0.39
CHD8-205ENST00000553651 A0A0C4DFX4 3053 aa12.62□□□□□ -0.39
CHD8-205ENST00000553651 IGF2BP3O00425 579 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHD8-205ENST00000553651 ALDH1A1P00352 501 aa12.61□□□□□ -0.39
CHD8-205ENST00000553651 NEFMP07197 916 aa12.61□□□□□ -0.39
CHD8-205ENST00000553651 TTLL12Q14166 644 aaPredicted RBP12.61□□□□□ -0.39
CHD8-205ENST00000553651 PODNQ7Z5L7 613 aa12.61□□□□□ -0.39
CHD8-205ENST00000553651 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
CHD8-205ENST00000553651 ANKIB1Q9P2G1 1089 aa12.61□□□□□ -0.39
CHD8-205ENST00000553651 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
CHD8-205ENST00000553651 SSC5DA1L4H1 1573 aa12.6□□□□□ -0.39
CHD8-205ENST00000553651 G3V3G9 751 aa12.6□□□□□ -0.39
CHD8-205ENST00000553651 CHL1O00533 1208 aa12.6□□□□□ -0.39
CHD8-205ENST00000553651 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms