RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 RABL6Q3YEC7 729 aaPredicted RBP28.64■■■□□ 2.18
TDP1-206ENST00000553569 DZIP1LQ8IYY4 767 aaKnown RBP28.64■■■□□ 2.18
TDP1-206ENST00000553569 ZNF594Q96JF6 807 aaPredicted RBP28.64■■■□□ 2.18
TDP1-206ENST00000553569 GPR101Q96P66 508 aaPredicted RBP28.64■■■□□ 2.18
TDP1-206ENST00000553569 POLLQ9UGP5 575 aa28.64■■■□□ 2.18
TDP1-206ENST00000553569 MINPP1Q9UNW1 487 aa28.64■■■□□ 2.18
TDP1-206ENST00000553569 KDM2BQ8NHM5 1336 aa28.64■■■□□ 2.17
TDP1-206ENST00000553569 NIM1KQ8IY84 436 aa28.63■■■□□ 2.17
TDP1-206ENST00000553569 TBC1D16Q8TBP0 767 aa28.63■■■□□ 2.17
TDP1-206ENST00000553569 GGA1Q9UJY5 639 aa28.63■■■□□ 2.17
TDP1-206ENST00000553569 XDHP47989 1333 aa28.63■■■□□ 2.17
TDP1-206ENST00000553569 KIAA2012Q0VF49 1180 aa28.62■■■□□ 2.17
TDP1-206ENST00000553569 PODXL2Q9NZ53 605 aa28.62■■■□□ 2.17
TDP1-206ENST00000553569 LRRFIP2Q9Y608 721 aaKnown RBP28.62■■■□□ 2.17
TDP1-206ENST00000553569 ZNF541Q9H0D2 1346 aa28.62■■■□□ 2.17
TDP1-206ENST00000553569 A0A1B0GUL6 1792 aa28.61■■■□□ 2.17
TDP1-206ENST00000553569 GLTPD2A6NH11 291 aa28.61■■■□□ 2.17
TDP1-206ENST00000553569 RIMBP2O15034 1052 aa28.61■■■□□ 2.17
TDP1-206ENST00000553569 RLBP1P12271 317 aa28.61■■■□□ 2.17
TDP1-206ENST00000553569 VPS33BQ9H267 617 aa28.61■■■□□ 2.17
TDP1-206ENST00000553569 GNAI3P08754 354 aa28.6■■■□□ 2.17
TDP1-206ENST00000553569 WASHC4Q2M389 1173 aa28.6■■■□□ 2.17
TDP1-206ENST00000553569 DPY19L2Q6NUT2 758 aa28.6■■■□□ 2.17
TDP1-206ENST00000553569 EYA3Q99504 573 aa28.6■■■□□ 2.17
TDP1-206ENST00000553569 NMRK2Q9NPI5 230 aa28.6■■■□□ 2.17
TDP1-206ENST00000553569 FZD9O00144 591 aa28.59■■■□□ 2.17
TDP1-206ENST00000553569 ITPRIPQ8IWB1 547 aa28.59■■■□□ 2.17
TDP1-206ENST00000553569 ATP2B4P23634 1241 aa28.58■■■□□ 2.17
TDP1-206ENST00000553569 CHRNDQ07001 517 aa28.58■■■□□ 2.17
TDP1-206ENST00000553569 LDHAL6AQ6ZMR3 332 aa28.58■■■□□ 2.17
TDP1-206ENST00000553569 CNNM1Q9NRU3 951 aa28.58■■■□□ 2.17
TDP1-206ENST00000553569 HDAC5Q9UQL6 1122 aa28.58■■■□□ 2.17
TDP1-206ENST00000553569 PLIN1O60240 522 aa28.57■■■□□ 2.16
TDP1-206ENST00000553569 DDNO94850 711 aaPredicted RBP28.57■■■□□ 2.16
TDP1-206ENST00000553569 EIF6P56537 245 aaKnown RBP28.57■■■□□ 2.16
TDP1-206ENST00000553569 PANK1Q8TE04 598 aa28.57■■■□□ 2.16
TDP1-206ENST00000553569 ANKRD2Q9GZV1 360 aa28.56■■■□□ 2.16
TDP1-206ENST00000553569 WDR90Q96KV7 1748 aa28.55■■■□□ 2.16
TDP1-206ENST00000553569 WTIPA6NIX2 430 aaPredicted RBP28.55■■■□□ 2.16
TDP1-206ENST00000553569 KLHDC4Q8TBB5 520 aa28.55■■■□□ 2.16
TDP1-206ENST00000553569 ZC3H12CQ9C0D7 883 aaKnown RBP28.55■■■□□ 2.16
TDP1-206ENST00000553569 DBNDD1Q9H9R9 158 aa28.55■■■□□ 2.16
TDP1-206ENST00000553569 RRAGCQ9HB90 399 aa28.55■■■□□ 2.16
TDP1-206ENST00000553569 DOK7Q18PE1 504 aa28.54■■■□□ 2.16
TDP1-206ENST00000553569 HELBQ8NG08 1087 aaPredicted RBP28.54■■■□□ 2.16
TDP1-206ENST00000553569 PUS3Q9BZE2 481 aaKnown RBP28.54■■■□□ 2.16
TDP1-206ENST00000553569 ZNRF3Q9ULT6 936 aa28.54■■■□□ 2.16
TDP1-206ENST00000553569 KCNJ4P48050 445 aa28.53■■■□□ 2.16
TDP1-206ENST00000553569 GJA3Q9Y6H8 435 aa28.53■■■□□ 2.16
TDP1-206ENST00000553569 TAF5LO75529 589 aa28.52■■■□□ 2.16
TDP1-206ENST00000553569 GNAI2P04899 355 aa28.52■■■□□ 2.16
TDP1-206ENST00000553569 MS4A1P11836 297 aa28.52■■■□□ 2.16
TDP1-206ENST00000553569 LEMD3Q9Y2U8 911 aa28.52■■■□□ 2.16
TDP1-206ENST00000553569 ZNF804BA4D1E1 1349 aa28.51■■■□□ 2.15
TDP1-206ENST00000553569 G3V3G9 751 aa28.51■■■□□ 2.15
TDP1-206ENST00000553569 KIF3CO14782 793 aa28.51■■■□□ 2.15
TDP1-206ENST00000553569 ECE2O60344 883 aa28.51■■■□□ 2.15
TDP1-206ENST00000553569 DCAF8Q5TAQ9 597 aa28.51■■■□□ 2.15
TDP1-206ENST00000553569 MED23Q9ULK4 1368 aa28.5■■■□□ 2.15
TDP1-206ENST00000553569 YDJCA8MPS7 323 aa28.5■■■□□ 2.15
TDP1-206ENST00000553569 RFX5P48382 616 aaPredicted RBP28.5■■■□□ 2.15
TDP1-206ENST00000553569 LRRC24Q50LG9 513 aa28.5■■■□□ 2.15
TDP1-206ENST00000553569 SNAP23O00161 211 aa28.49■■■□□ 2.15
TDP1-206ENST00000553569 RAD17O75943 681 aa28.49■■■□□ 2.15
TDP1-206ENST00000553569 GPC2Q8N158 579 aa28.49■■■□□ 2.15
TDP1-206ENST00000553569 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.49■■■□□ 2.15
TDP1-206ENST00000553569 KLRK1P26718 216 aa28.48■■■□□ 2.15
TDP1-206ENST00000553569 CXCL9Q07325 125 aa28.48■■■□□ 2.15
TDP1-206ENST00000553569 C1orf115Q9H7X2 142 aa28.48■■■□□ 2.15
TDP1-206ENST00000553569 PTPN12Q05209 780 aaKnown RBP28.47■■■□□ 2.15
TDP1-206ENST00000553569 CIAPIN1Q6FI81 312 aa28.47■■■□□ 2.15
TDP1-206ENST00000553569 RIPOR2Q9Y4F9 1068 aa28.47■■■□□ 2.15
TDP1-206ENST00000553569 MROH5Q6ZUA9 1318 aa28.46■■■□□ 2.15
TDP1-206ENST00000553569 SCN9AQ15858 1988 aa28.46■■■□□ 2.15
TDP1-206ENST00000553569 SRGAP3O43295 1099 aa28.46■■■□□ 2.15
TDP1-206ENST00000553569 VEGFAP15692 232 aaPredicted RBP28.46■■■□□ 2.15
TDP1-206ENST00000553569 METTL24Q5JXM2 366 aa28.46■■■□□ 2.15
TDP1-206ENST00000553569 L3MBTL3Q96JM7 780 aaPredicted RBP28.46■■■□□ 2.15
TDP1-206ENST00000553569 SIL1Q9H173 461 aa28.46■■■□□ 2.15
TDP1-206ENST00000553569 COG6Q9Y2V7 657 aa28.46■■■□□ 2.15
TDP1-206ENST00000553569 POTECB2RU33 542 aa28.45■■■□□ 2.14
TDP1-206ENST00000553569 ZBTB7BO15156 539 aaPredicted RBP28.45■■■□□ 2.14
TDP1-206ENST00000553569 TXNRD3Q86VQ6 643 aa28.45■■■□□ 2.14
TDP1-206ENST00000553569 C16orf71Q8IYS4 520 aaPredicted RBP28.45■■■□□ 2.14
TDP1-206ENST00000553569 PA2G4Q9UQ80 394 aaKnown RBP28.45■■■□□ 2.14
TDP1-206ENST00000553569 SCN4AP35499 1836 aa28.45■■■□□ 2.14
TDP1-206ENST00000553569 MVPQ14764 893 aaKnown RBP28.44■■■□□ 2.14
TDP1-206ENST00000553569 C20orf194Q5TEA3 1177 aa28.44■■■□□ 2.14
TDP1-206ENST00000553569 EYA2O00167 538 aa28.43■■■□□ 2.14
TDP1-206ENST00000553569 MTX1Q13505 466 aa28.43■■■□□ 2.14
TDP1-206ENST00000553569 TNIP1Q15025 636 aa28.43■■■□□ 2.14
TDP1-206ENST00000553569 KCNQ5Q9NR82 932 aa28.43■■■□□ 2.14
TDP1-206ENST00000553569 IQCA1LA6NCM1 817 aa28.42■■■□□ 2.14
TDP1-206ENST00000553569 PSMD14O00487 310 aa28.41■■■□□ 2.14
TDP1-206ENST00000553569 HACL1Q9UJ83 578 aa28.41■■■□□ 2.14
TDP1-206ENST00000553569 PSME4Q14997 1843 aa28.41■■■□□ 2.14
TDP1-206ENST00000553569 PNMA6EA0A0J9YXQ4 647 aa28.4■■■□□ 2.14
TDP1-206ENST00000553569 LMOD1P29536 600 aaPredicted RBP28.4■■■□□ 2.14
TDP1-206ENST00000553569 GMPSP49915 693 aaPredicted RBP28.4■■■□□ 2.14
TDP1-206ENST00000553569 COA1Q9GZY4 146 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms