RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 PRDM10Q9NQV6 1147 aa16.02■□□□□ 0.16
SIX1-202ENST00000553535 CWC25Q9NXE8 425 aaPredicted RBP16.02■□□□□ 0.16
SIX1-202ENST00000553535 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
SIX1-202ENST00000553535 PSMD14O00487 310 aa16.01■□□□□ 0.15
SIX1-202ENST00000553535 PDE8AO60658 829 aa16.01■□□□□ 0.15
SIX1-202ENST00000553535 WWC1Q8IX03 1113 aa16.01■□□□□ 0.15
SIX1-202ENST00000553535 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
SIX1-202ENST00000553535 JARID2Q92833 1246 aaPredicted RBP16.01■□□□□ 0.15
SIX1-202ENST00000553535 TSR2Q969E8 191 aaKnown RBP16.01■□□□□ 0.15
SIX1-202ENST00000553535 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
SIX1-202ENST00000553535 H7C1D1 291 aa16■□□□□ 0.15
SIX1-202ENST00000553535 CTCFP49711 727 aaPredicted RBP16■□□□□ 0.15
SIX1-202ENST00000553535 KSR2Q6VAB6 950 aa16■□□□□ 0.15
SIX1-202ENST00000553535 AIDAQ96BJ3 306 aa16■□□□□ 0.15
SIX1-202ENST00000553535 EYA3Q99504 573 aa16■□□□□ 0.15
SIX1-202ENST00000553535 GLIS2Q9BZE0 524 aaPredicted RBP16■□□□□ 0.15
SIX1-202ENST00000553535 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
SIX1-202ENST00000553535 MAP3K2Q9Y2U5 619 aa16■□□□□ 0.15
SIX1-202ENST00000553535 TLL2Q9Y6L7 1015 aa16■□□□□ 0.15
SIX1-202ENST00000553535 POLR2AP24928 1970 aaKnown RBP16■□□□□ 0.15
SIX1-202ENST00000553535 DOK7Q18PE1 504 aa16■□□□□ 0.15
SIX1-202ENST00000553535 CCDC152Q4G0S7 254 aa16■□□□□ 0.15
SIX1-202ENST00000553535 MICALL2Q8IY33 904 aa16■□□□□ 0.15
SIX1-202ENST00000553535 CAPNS2Q96L46 248 aa16■□□□□ 0.15
SIX1-202ENST00000553535 GPR101Q96P66 508 aaPredicted RBP16■□□□□ 0.15
SIX1-202ENST00000553535 PI4KAP2A4QPH2 592 aa15.99■□□□□ 0.15
SIX1-202ENST00000553535 ECE2O60344 883 aa15.99■□□□□ 0.15
SIX1-202ENST00000553535 IGKV5-2P06315 115 aa15.99■□□□□ 0.15
SIX1-202ENST00000553535 MAP2K1Q02750 393 aaPredicted RBP15.99■□□□□ 0.15
SIX1-202ENST00000553535 CDC37L1Q7L3B6 337 aa15.99■□□□□ 0.15
SIX1-202ENST00000553535 PI4KAP1Q8N8J0 262 aa15.99■□□□□ 0.15
SIX1-202ENST00000553535 SCN9AQ15858 1988 aa15.99■□□□□ 0.15
SIX1-202ENST00000553535 RTL9Q8NET4 1388 aa15.98■□□□□ 0.15
SIX1-202ENST00000553535 CELF2O95319 508 aaKnown RBP15.98■□□□□ 0.15
SIX1-202ENST00000553535 ECE1P42892 770 aa15.98■□□□□ 0.15
SIX1-202ENST00000553535 CYP4F22Q6NT55 531 aa15.98■□□□□ 0.15
SIX1-202ENST00000553535 PIP4P2Q8N4L2 257 aa15.98■□□□□ 0.15
SIX1-202ENST00000553535 ZC3H12CQ9C0D7 883 aaKnown RBP15.98■□□□□ 0.15
SIX1-202ENST00000553535 IL16Q14005 1332 aa15.98■□□□□ 0.15
SIX1-202ENST00000553535 RPS12P25398 132 aaKnown RBP15.97■□□□□ 0.15
SIX1-202ENST00000553535 LBX1P52954 281 aa15.97■□□□□ 0.15
SIX1-202ENST00000553535 TWISTNBQ3B726 338 aaPredicted RBP15.97■□□□□ 0.15
SIX1-202ENST00000553535 SAMD7Q7Z3H4 446 aa15.97■□□□□ 0.15
SIX1-202ENST00000553535 SAPCD2Q86UD0 394 aa15.97■□□□□ 0.15
SIX1-202ENST00000553535 CCDC85AQ96PX6 553 aaPredicted RBP15.97■□□□□ 0.15
SIX1-202ENST00000553535 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
SIX1-202ENST00000553535 UFL1O94874 794 aa15.96■□□□□ 0.15
SIX1-202ENST00000553535 VIL1P09327 827 aaKnown RBP15.96■□□□□ 0.15
SIX1-202ENST00000553535 G2E3Q7L622 706 aa15.96■□□□□ 0.15
SIX1-202ENST00000553535 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
SIX1-202ENST00000553535 GGA1Q9UJY5 639 aa15.96■□□□□ 0.15
SIX1-202ENST00000553535 EGFRP00533 1210 aa15.96■□□□□ 0.14
SIX1-202ENST00000553535 HSPA8P11142 646 aaKnown RBP15.96■□□□□ 0.14
SIX1-202ENST00000553535 PAXIP1Q6ZW49 1069 aaPredicted RBP15.96■□□□□ 0.14
SIX1-202ENST00000553535 USP48Q86UV5 1035 aa15.96■□□□□ 0.14
SIX1-202ENST00000553535 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.14
SIX1-202ENST00000553535 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.14
SIX1-202ENST00000553535 HHIPL1Q96JK4 782 aa15.96■□□□□ 0.14
SIX1-202ENST00000553535 THSD7BQ9C0I4 1608 aa15.96■□□□□ 0.14
SIX1-202ENST00000553535 CTSWP56202 376 aa15.95■□□□□ 0.14
SIX1-202ENST00000553535 CWF19L2Q2TBE0 894 aaKnown RBP15.95■□□□□ 0.14
SIX1-202ENST00000553535 TBC1D10BQ4KMP7 808 aaPredicted RBP15.95■□□□□ 0.14
SIX1-202ENST00000553535 REM2Q8IYK8 340 aaPredicted RBP15.95■□□□□ 0.14
SIX1-202ENST00000553535 MYH3P11055 1940 aa15.95■□□□□ 0.14
SIX1-202ENST00000553535 CACNA1FO60840 1977 aa15.94■□□□□ 0.14
SIX1-202ENST00000553535 NEURL1BA8MQ27 555 aa15.94■□□□□ 0.14
SIX1-202ENST00000553535 H7C1W4 665 aa15.94■□□□□ 0.14
SIX1-202ENST00000553535 MAP2K2P36507 400 aa15.94■□□□□ 0.14
SIX1-202ENST00000553535 NEXNQ0ZGT2 675 aa15.94■□□□□ 0.14
SIX1-202ENST00000553535 GRM1Q13255 1194 aa15.94■□□□□ 0.14
SIX1-202ENST00000553535 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
SIX1-202ENST00000553535 XDHP47989 1333 aa15.94■□□□□ 0.14
SIX1-202ENST00000553535 AOC2O75106 756 aa15.93■□□□□ 0.14
SIX1-202ENST00000553535 ATP2B4P23634 1241 aa15.93■□□□□ 0.14
SIX1-202ENST00000553535 RBM26Q5T8P6 1007 aaKnown RBP15.93■□□□□ 0.14
SIX1-202ENST00000553535 DLK2Q6UY11 383 aa15.93■□□□□ 0.14
SIX1-202ENST00000553535 CDC5LQ99459 802 aaKnown RBP15.93■□□□□ 0.14
SIX1-202ENST00000553535 ZNF408Q9H9D4 720 aa15.93■□□□□ 0.14
SIX1-202ENST00000553535 G3V3G9 751 aa15.92■□□□□ 0.14
SIX1-202ENST00000553535 DCAF8Q5TAQ9 597 aa15.92■□□□□ 0.14
SIX1-202ENST00000553535 GREM2Q9H772 168 aa15.92■□□□□ 0.14
SIX1-202ENST00000553535 BSDC1Q9NW68 430 aaPredicted RBP15.92■□□□□ 0.14
SIX1-202ENST00000553535 PSME4Q14997 1843 aa15.92■□□□□ 0.14
SIX1-202ENST00000553535 WTIPA6NIX2 430 aaPredicted RBP15.92■□□□□ 0.14
SIX1-202ENST00000553535 HAX1O00165 279 aa15.92■□□□□ 0.14
SIX1-202ENST00000553535 ZEB1P37275 1124 aaPredicted RBP15.92■□□□□ 0.14
SIX1-202ENST00000553535 KRT26Q7Z3Y9 468 aa15.92■□□□□ 0.14
SIX1-202ENST00000553535 WDR63Q8IWG1 891 aa15.92■□□□□ 0.14
SIX1-202ENST00000553535 MINPP1Q9UNW1 487 aa15.92■□□□□ 0.14
SIX1-202ENST00000553535 VAMP4O75379 141 aa15.91■□□□□ 0.14
SIX1-202ENST00000553535 ZNF280AP59817 542 aaPredicted RBP15.91■□□□□ 0.14
SIX1-202ENST00000553535 FLIIQ13045 1269 aa15.91■□□□□ 0.14
SIX1-202ENST00000553535 GCKRQ14397 625 aa15.91■□□□□ 0.14
SIX1-202ENST00000553535 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
SIX1-202ENST00000553535 UBE3BQ7Z3V4 1068 aa15.91■□□□□ 0.14
SIX1-202ENST00000553535 AGBL3Q8NEM8 1001 aa15.91■□□□□ 0.14
SIX1-202ENST00000553535 DCPSQ96C86 337 aaKnown RBP15.91■□□□□ 0.14
SIX1-202ENST00000553535 GMLQ99445 158 aa15.91■□□□□ 0.14
SIX1-202ENST00000553535 FANCIQ9NVI1 1328 aa15.91■□□□□ 0.14
SIX1-202ENST00000553535 ZNF609O15014 1411 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms