RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 UFL1O94874 794 aa23.77■■□□□ 1.4
HDAC4-217ENST00000553145 NBPF7P0C2Y1 421 aaPredicted RBP23.77■■□□□ 1.4
HDAC4-217ENST00000553145 CXCL9Q07325 125 aa23.77■■□□□ 1.4
HDAC4-217ENST00000553145 SMC1BQ8NDV3 1235 aa23.77■■□□□ 1.4
HDAC4-217ENST00000553145 MINPP1Q9UNW1 487 aa23.77■■□□□ 1.4
HDAC4-217ENST00000553145 LMBR1LQ6UX01 489 aa23.76■■□□□ 1.39
HDAC4-217ENST00000553145 KAZALD1Q96I82 304 aa23.76■■□□□ 1.39
HDAC4-217ENST00000553145 SUCLG2Q96I99 432 aa23.76■■□□□ 1.39
HDAC4-217ENST00000553145 DBNDD1Q9H9R9 158 aa23.76■■□□□ 1.39
HDAC4-217ENST00000553145 HACL1Q9UJ83 578 aa23.76■■□□□ 1.39
HDAC4-217ENST00000553145 GGA1Q9UJY5 639 aa23.76■■□□□ 1.39
HDAC4-217ENST00000553145 NOB1Q9ULX3 412 aaKnown RBP23.76■■□□□ 1.39
HDAC4-217ENST00000553145 UTYO14607 1347 aa23.76■■□□□ 1.39
HDAC4-217ENST00000553145 XDHP47989 1333 aa23.76■■□□□ 1.39
HDAC4-217ENST00000553145 WTIPA6NIX2 430 aaPredicted RBP23.75■■□□□ 1.39
HDAC4-217ENST00000553145 IGHMBP2P38935 993 aaKnown RBP23.75■■□□□ 1.39
HDAC4-217ENST00000553145 SCNN1DP51172 638 aa23.75■■□□□ 1.39
HDAC4-217ENST00000553145 BRPF1P55201 1214 aaPredicted RBP23.75■■□□□ 1.39
HDAC4-217ENST00000553145 EYA3Q99504 573 aa23.75■■□□□ 1.39
HDAC4-217ENST00000553145 ANKRD18BA2A2Z9 1011 aa23.74■■□□□ 1.39
HDAC4-217ENST00000553145 RAD17O75943 681 aa23.74■■□□□ 1.39
HDAC4-217ENST00000553145 CHMP3Q9Y3E7 222 aa23.74■■□□□ 1.39
HDAC4-217ENST00000553145 ADAMTSL1Q8N6G6 1762 aa23.73■■□□□ 1.39
HDAC4-217ENST00000553145 EPHX2P34913 555 aa23.73■■□□□ 1.39
HDAC4-217ENST00000553145 DOK7Q18PE1 504 aa23.73■■□□□ 1.39
HDAC4-217ENST00000553145 CIAPIN1Q6FI81 312 aa23.73■■□□□ 1.39
HDAC4-217ENST00000553145 ECE2O60344 883 aa23.72■■□□□ 1.39
HDAC4-217ENST00000553145 ATP2B4P23634 1241 aa23.72■■□□□ 1.39
HDAC4-217ENST00000553145 IFIT5Q13325 482 aaKnown RBP23.72■■□□□ 1.39
HDAC4-217ENST00000553145 ZC3H12CQ9C0D7 883 aaKnown RBP23.72■■□□□ 1.39
HDAC4-217ENST00000553145 ZBED9Q6R2W3 1325 aa23.72■■□□□ 1.39
HDAC4-217ENST00000553145 EPS15P42566 896 aa23.71■■□□□ 1.39
HDAC4-217ENST00000553145 MPHOSPH8Q99549 860 aa23.71■■□□□ 1.39
HDAC4-217ENST00000553145 USP44Q9H0E7 712 aa23.71■■□□□ 1.39
HDAC4-217ENST00000553145 GMPSP49915 693 aaPredicted RBP23.7■■□□□ 1.38
HDAC4-217ENST00000553145 EAPPQ56P03 285 aaPredicted RBP23.7■■□□□ 1.38
HDAC4-217ENST00000553145 CHADLQ6NUI6 762 aa23.7■■□□□ 1.38
HDAC4-217ENST00000553145 KCNQ5Q9NR82 932 aa23.7■■□□□ 1.38
HDAC4-217ENST00000553145 A0A1B0GUL6 1792 aa23.7■■□□□ 1.38
HDAC4-217ENST00000553145 SCN9AQ15858 1988 aa23.69■■□□□ 1.38
HDAC4-217ENST00000553145 LMOD1P29536 600 aaPredicted RBP23.69■■□□□ 1.38
HDAC4-217ENST00000553145 CCT4P50991 539 aaKnown RBP23.69■■□□□ 1.38
HDAC4-217ENST00000553145 LDHDQ86WU2 507 aa23.69■■□□□ 1.38
HDAC4-217ENST00000553145 ANKRD44Q8N8A2 993 aa23.69■■□□□ 1.38
HDAC4-217ENST00000553145 ZNF594Q96JF6 807 aaPredicted RBP23.69■■□□□ 1.38
HDAC4-217ENST00000553145 API5Q9BZZ5 524 aaKnown RBP23.69■■□□□ 1.38
HDAC4-217ENST00000553145 BICC1Q9H694 974 aaKnown RBP23.69■■□□□ 1.38
HDAC4-217ENST00000553145 KIF16BQ96L93 1317 aa23.68■■□□□ 1.38
HDAC4-217ENST00000553145 BCAR3O75815 825 aa23.68■■□□□ 1.38
HDAC4-217ENST00000553145 CHRNDQ07001 517 aa23.68■■□□□ 1.38
HDAC4-217ENST00000553145 TNIP1Q15025 636 aa23.68■■□□□ 1.38
HDAC4-217ENST00000553145 CCDC57Q2TAC2 916 aa23.68■■□□□ 1.38
HDAC4-217ENST00000553145 GPRC5DQ9NZD1 345 aa23.68■■□□□ 1.38
HDAC4-217ENST00000553145 MED23Q9ULK4 1368 aa23.67■■□□□ 1.38
HDAC4-217ENST00000553145 PSMD14O00487 310 aa23.67■■□□□ 1.38
HDAC4-217ENST00000553145 APLP1P51693 650 aa23.67■■□□□ 1.38
HDAC4-217ENST00000553145 RABL6Q3YEC7 729 aaPredicted RBP23.67■■□□□ 1.38
HDAC4-217ENST00000553145 ZBTB12Q9Y330 459 aaPredicted RBP23.67■■□□□ 1.38
HDAC4-217ENST00000553145 HTRA3P83110 453 aa23.66■■□□□ 1.38
HDAC4-217ENST00000553145 PNMA8AQ86V59 439 aaPredicted RBP23.66■■□□□ 1.38
HDAC4-217ENST00000553145 ANKRD2Q9GZV1 360 aa23.66■■□□□ 1.38
HDAC4-217ENST00000553145 TNNQ9UQP3 1299 aa23.66■■□□□ 1.38
HDAC4-217ENST00000553145 SHTN1A0MZ66 631 aa23.65■■□□□ 1.38
HDAC4-217ENST00000553145 KLRK1P26718 216 aa23.65■■□□□ 1.38
HDAC4-217ENST00000553145 TXNRD3Q86VQ6 643 aa23.65■■□□□ 1.38
HDAC4-217ENST00000553145 HELBQ8NG08 1087 aaPredicted RBP23.65■■□□□ 1.38
HDAC4-217ENST00000553145 ARHGAP45Q92619 1136 aa23.65■■□□□ 1.38
HDAC4-217ENST00000553145 LEMD3Q9Y2U8 911 aa23.65■■□□□ 1.38
HDAC4-217ENST00000553145 ZNF804BA4D1E1 1349 aa23.64■■□□□ 1.38
HDAC4-217ENST00000553145 G3V3G9 751 aa23.64■■□□□ 1.37
HDAC4-217ENST00000553145 SNAP23O00161 211 aa23.64■■□□□ 1.37
HDAC4-217ENST00000553145 TAF7LQ5H9L4 462 aa23.64■■□□□ 1.37
HDAC4-217ENST00000553145 DCAF8Q5TAQ9 597 aa23.64■■□□□ 1.37
HDAC4-217ENST00000553145 CLEC11AQ9Y240 323 aa23.64■■□□□ 1.37
HDAC4-217ENST00000553145 TAF5LO75529 589 aa23.63■■□□□ 1.37
HDAC4-217ENST00000553145 LDHAL6AQ6ZMR3 332 aa23.63■■□□□ 1.37
HDAC4-217ENST00000553145 ADARB2Q9NS39 739 aaKnown RBP23.63■■□□□ 1.37
HDAC4-217ENST00000553145 PSME4Q14997 1843 aa23.63■■□□□ 1.37
HDAC4-217ENST00000553145 MAP1SQ66K74 1059 aaPredicted RBP23.62■■□□□ 1.37
HDAC4-217ENST00000553145 USP50Q70EL3 339 aaPredicted RBP23.62■■□□□ 1.37
HDAC4-217ENST00000553145 FRAT1Q92837 279 aaPredicted RBP23.62■■□□□ 1.37
HDAC4-217ENST00000553145 PUS3Q9BZE2 481 aaKnown RBP23.62■■□□□ 1.37
HDAC4-217ENST00000553145 IRS2Q9Y4H2 1338 aa23.61■■□□□ 1.37
HDAC4-217ENST00000553145 VIL1P09327 827 aaKnown RBP23.61■■□□□ 1.37
HDAC4-217ENST00000553145 TRIM27P14373 513 aa23.61■■□□□ 1.37
HDAC4-217ENST00000553145 MICALL2Q8IY33 904 aa23.61■■□□□ 1.37
HDAC4-217ENST00000553145 CNNM1Q9NRU3 951 aa23.61■■□□□ 1.37
HDAC4-217ENST00000553145 CNOT7Q9UIV1 285 aaKnown RBP23.61■■□□□ 1.37
HDAC4-217ENST00000553145 ZNF646O15015 1829 aaPredicted RBP23.61■■□□□ 1.37
HDAC4-217ENST00000553145 ITGBL1O95965 494 aaPredicted RBP23.6■■□□□ 1.37
HDAC4-217ENST00000553145 INTS3Q68E01 1043 aaKnown RBP23.6■■□□□ 1.37
HDAC4-217ENST00000553145 TRPM4Q8TD43 1214 aa23.6■■□□□ 1.37
HDAC4-217ENST00000553145 DPF2Q92785 391 aa23.6■■□□□ 1.37
HDAC4-217ENST00000553145 PASKQ96RG2 1323 aa23.59■■□□□ 1.37
HDAC4-217ENST00000553145 UBTFL1P0CB47 393 aaPredicted RBP23.59■■□□□ 1.37
HDAC4-217ENST00000553145 KCNJ4P48050 445 aa23.59■■□□□ 1.37
HDAC4-217ENST00000553145 ATF7IPQ6VMQ6 1270 aa23.59■■□□□ 1.37
HDAC4-217ENST00000553145 PODNQ7Z5L7 613 aa23.59■■□□□ 1.37
HDAC4-217ENST00000553145 MEIS3Q99687 375 aa23.59■■□□□ 1.37
HDAC4-217ENST00000553145 IPO8O15397 1037 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms