RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ZNF408Q9H9D4 720 aa15.34■□□□□ 0.05
CKAP4-202ENST00000552828 VIL1P09327 827 aaKnown RBP15.33■□□□□ 0.04
CKAP4-202ENST00000552828 GNAI1P63096 354 aa15.33■□□□□ 0.04
CKAP4-202ENST00000552828 CALD1Q05682 793 aaKnown RBP15.33■□□□□ 0.04
CKAP4-202ENST00000552828 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
CKAP4-202ENST00000552828 NOGQ13253 232 aa15.33■□□□□ 0.04
CKAP4-202ENST00000552828 DOK7Q18PE1 504 aa15.33■□□□□ 0.04
CKAP4-202ENST00000552828 TBC1D10BQ4KMP7 808 aaPredicted RBP15.33■□□□□ 0.04
CKAP4-202ENST00000552828 KRT26Q7Z3Y9 468 aa15.33■□□□□ 0.04
CKAP4-202ENST00000552828 CCDC191Q8NCU4 936 aa15.33■□□□□ 0.04
CKAP4-202ENST00000552828 PHAXQ9H814 394 aaKnown RBP15.33■□□□□ 0.04
CKAP4-202ENST00000552828 SEC31BQ9NQW1 1179 aa15.33■□□□□ 0.04
CKAP4-202ENST00000552828 PCCAP05165 728 aaPredicted RBP15.32■□□□□ 0.04
CKAP4-202ENST00000552828 HUNKP57058 714 aa15.32■□□□□ 0.04
CKAP4-202ENST00000552828 DLK2Q6UY11 383 aa15.32■□□□□ 0.04
CKAP4-202ENST00000552828 ZC3H12CQ9C0D7 883 aaKnown RBP15.32■□□□□ 0.04
CKAP4-202ENST00000552828 TSKSQ9UJT2 592 aa15.32■□□□□ 0.04
CKAP4-202ENST00000552828 FAM155AB1AL88 458 aaPredicted RBP15.31■□□□□ 0.04
CKAP4-202ENST00000552828 APAF1O14727 1248 aa15.31■□□□□ 0.04
CKAP4-202ENST00000552828 RGS19P49795 217 aa15.31■□□□□ 0.04
CKAP4-202ENST00000552828 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
CKAP4-202ENST00000552828 DCPSQ96C86 337 aaKnown RBP15.31■□□□□ 0.04
CKAP4-202ENST00000552828 ZIC5Q96T25 663 aa15.31■□□□□ 0.04
CKAP4-202ENST00000552828 CHMP4AQ9BY43 222 aa15.31■□□□□ 0.04
CKAP4-202ENST00000552828 ZNF609O15014 1411 aa15.31■□□□□ 0.04
CKAP4-202ENST00000552828 PDE8AO60658 829 aa15.3■□□□□ 0.04
CKAP4-202ENST00000552828 ZNF280AP59817 542 aaPredicted RBP15.3■□□□□ 0.04
CKAP4-202ENST00000552828 RGMBQ6NW40 437 aa15.3■□□□□ 0.04
CKAP4-202ENST00000552828 C8orf58Q8NAV2 365 aa15.3■□□□□ 0.04
CKAP4-202ENST00000552828 MYD88Q99836 296 aa15.3■□□□□ 0.04
CKAP4-202ENST00000552828 METTL22Q9BUU2 404 aaPredicted RBP15.3■□□□□ 0.04
CKAP4-202ENST00000552828 GBA2Q9HCG7 927 aaPredicted RBP15.3■□□□□ 0.04
CKAP4-202ENST00000552828 CWC25Q9NXE8 425 aaPredicted RBP15.3■□□□□ 0.04
CKAP4-202ENST00000552828 ANKIB1Q9P2G1 1089 aa15.3■□□□□ 0.04
CKAP4-202ENST00000552828 GGA1Q9UJY5 639 aa15.3■□□□□ 0.04
CKAP4-202ENST00000552828 ADM5C9JUS6 153 aa15.29■□□□□ 0.04
CKAP4-202ENST00000552828 ELL2O00472 640 aaPredicted RBP15.29■□□□□ 0.04
CKAP4-202ENST00000552828 UFL1O94874 794 aa15.29■□□□□ 0.04
CKAP4-202ENST00000552828 KIF4BQ2VIQ3 1234 aa15.29■□□□□ 0.04
CKAP4-202ENST00000552828 C2orf69Q8N8R5 385 aa15.29■□□□□ 0.04
CKAP4-202ENST00000552828 AGBL3Q8NEM8 1001 aa15.29■□□□□ 0.04
CKAP4-202ENST00000552828 CCDC102AQ96A19 550 aa15.29■□□□□ 0.04
CKAP4-202ENST00000552828 CCDC85CA6NKD9 419 aa15.28■□□□□ 0.04
CKAP4-202ENST00000552828 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
CKAP4-202ENST00000552828 RBM26Q5T8P6 1007 aaKnown RBP15.28■□□□□ 0.04
CKAP4-202ENST00000552828 GMLQ99445 158 aa15.28■□□□□ 0.04
CKAP4-202ENST00000552828 XDHP47989 1333 aa15.27■□□□□ 0.04
CKAP4-202ENST00000552828 FAM161AQ3B820 660 aa15.27■□□□□ 0.04
CKAP4-202ENST00000552828 CCDC30Q5VVM6 783 aa15.27■□□□□ 0.04
CKAP4-202ENST00000552828 RSBN1LQ6PCB5 846 aaPredicted RBP15.27■□□□□ 0.04
CKAP4-202ENST00000552828 SULF1Q8IWU6 871 aa15.27■□□□□ 0.04
CKAP4-202ENST00000552828 MCOLN1Q9GZU1 580 aa15.27■□□□□ 0.04
CKAP4-202ENST00000552828 SAGE1Q9NXZ1 904 aa15.27■□□□□ 0.04
CKAP4-202ENST00000552828 G3V3G9 751 aa15.26■□□□□ 0.03
CKAP4-202ENST00000552828 DCAF8Q5TAQ9 597 aa15.26■□□□□ 0.03
CKAP4-202ENST00000552828 PODNQ7Z5L7 613 aa15.26■□□□□ 0.03
CKAP4-202ENST00000552828 ANKRD18AQ8IVF6 992 aa15.26■□□□□ 0.03
CKAP4-202ENST00000552828 JARID2Q92833 1246 aaPredicted RBP15.26■□□□□ 0.03
CKAP4-202ENST00000552828 GGA3Q9NZ52 723 aa15.26■□□□□ 0.03
CKAP4-202ENST00000552828 ASTN2O75129 1339 aaPredicted RBP15.25■□□□□ 0.03
CKAP4-202ENST00000552828 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
CKAP4-202ENST00000552828 ATP2B4P23634 1241 aa15.25■□□□□ 0.03
CKAP4-202ENST00000552828 ZNF157P51786 506 aaPredicted RBP15.25■□□□□ 0.03
CKAP4-202ENST00000552828 KIF23Q02241 960 aaPredicted RBP15.25■□□□□ 0.03
CKAP4-202ENST00000552828 SCARF1Q14162 830 aa15.25■□□□□ 0.03
CKAP4-202ENST00000552828 KSR2Q6VAB6 950 aa15.25■□□□□ 0.03
CKAP4-202ENST00000552828 CDCA5Q96FF9 252 aa15.25■□□□□ 0.03
CKAP4-202ENST00000552828 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
CKAP4-202ENST00000552828 SCN9AQ15858 1988 aa15.25■□□□□ 0.03
CKAP4-202ENST00000552828 SLC10A3P09131 477 aa15.24■□□□□ 0.03
CKAP4-202ENST00000552828 USP17L8P0C7I0 530 aa15.24■□□□□ 0.03
CKAP4-202ENST00000552828 CTSWP56202 376 aa15.24■□□□□ 0.03
CKAP4-202ENST00000552828 MLLT1Q03111 559 aaPredicted RBP15.24■□□□□ 0.03
CKAP4-202ENST00000552828 TSPYL6Q8N831 410 aa15.24■□□□□ 0.03
CKAP4-202ENST00000552828 TTLL11Q8NHH1 800 aa15.24■□□□□ 0.03
CKAP4-202ENST00000552828 CCDC85AQ96PX6 553 aaPredicted RBP15.24■□□□□ 0.03
CKAP4-202ENST00000552828 CDC5LQ99459 802 aaKnown RBP15.24■□□□□ 0.03
CKAP4-202ENST00000552828 BSDC1Q9NW68 430 aaPredicted RBP15.24■□□□□ 0.03
CKAP4-202ENST00000552828 PITPNM2Q9BZ72 1349 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 PI4KAP2A4QPH2 592 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 USP17L3A6NCW0 530 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 USP17L4A6NCW7 530 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 FKBP1BP68106 108 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 DGKZQ13574 1117 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 ANGEL2Q5VTE6 544 aaKnown RBP15.23■□□□□ 0.03
CKAP4-202ENST00000552828 USP17L1Q7RTZ2 530 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
CKAP4-202ENST00000552828 PI4KAP1Q8N8J0 262 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 MYOZ2Q9NPC6 264 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 RNF186Q9NXI6 227 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 MINPP1Q9UNW1 487 aa15.23■□□□□ 0.03
CKAP4-202ENST00000552828 WTIPA6NIX2 430 aaPredicted RBP15.22■□□□□ 0.03
CKAP4-202ENST00000552828 CCDC27Q2M243 656 aa15.22■□□□□ 0.03
CKAP4-202ENST00000552828 CCDC184Q52MB2 194 aa15.22■□□□□ 0.03
CKAP4-202ENST00000552828 CSRNP1Q96S65 589 aa15.22■□□□□ 0.03
CKAP4-202ENST00000552828 MED23Q9ULK4 1368 aa15.22■□□□□ 0.03
CKAP4-202ENST00000552828 GREM2Q9H772 168 aa15.21■□□□□ 0.03
CKAP4-202ENST00000552828 NEURL1BA8MQ27 555 aa15.2■□□□□ 0.02
CKAP4-202ENST00000552828 H7C1W4 665 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms