RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 C20orf194Q5TEA3 1177 aa11.49□□□□□ -0.57
CCDC59-207ENST00000552606 OLFM4Q6UX06 510 aa11.49□□□□□ -0.57
CCDC59-207ENST00000552606 DDX46Q7L014 1031 aaKnown RBP11.49□□□□□ -0.57
CCDC59-207ENST00000552606 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
CCDC59-207ENST00000552606 CCDC85AQ96PX6 553 aaPredicted RBP11.49□□□□□ -0.57
CCDC59-207ENST00000552606 LTBP3Q9NS15 1303 aa11.49□□□□□ -0.57
CCDC59-207ENST00000552606 C21orf2O43822 256 aa11.48□□□□□ -0.57
CCDC59-207ENST00000552606 UBTFL1P0CB47 393 aaPredicted RBP11.48□□□□□ -0.57
CCDC59-207ENST00000552606 MVPQ14764 893 aaKnown RBP11.48□□□□□ -0.57
CCDC59-207ENST00000552606 LMBR1LQ6UX01 489 aa11.48□□□□□ -0.57
CCDC59-207ENST00000552606 ITPRIPQ8IWB1 547 aa11.48□□□□□ -0.57
CCDC59-207ENST00000552606 DCBLD2Q96PD2 775 aa11.48□□□□□ -0.57
CCDC59-207ENST00000552606 GRIN3BO60391 1043 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 GNAI3P08754 354 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 MS4A1P11836 297 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 ITGA6P23229 1130 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 CLCN6P51797 869 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 PRELPP51888 382 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 CCDC93Q567U6 631 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 TMC4Q7Z404 712 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 ATP6V0A2Q9Y487 856 aa11.47□□□□□ -0.57
CCDC59-207ENST00000552606 FARP1Q9Y4F1 1045 aaPredicted RBP11.47□□□□□ -0.57
CCDC59-207ENST00000552606 LRRFIP2Q9Y608 721 aaKnown RBP11.47□□□□□ -0.57
CCDC59-207ENST00000552606 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
CCDC59-207ENST00000552606 BBOX1O75936 387 aa11.46□□□□□ -0.57
CCDC59-207ENST00000552606 RPS8P62241 208 aaKnown RBP11.46□□□□□ -0.57
CCDC59-207ENST00000552606 RASSF7Q02833 373 aa11.46□□□□□ -0.57
CCDC59-207ENST00000552606 MTX1Q13505 466 aa11.46□□□□□ -0.57
CCDC59-207ENST00000552606 SOGA3Q5TF21 947 aa11.46□□□□□ -0.57
CCDC59-207ENST00000552606 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.46□□□□□ -0.57
CCDC59-207ENST00000552606 CDC5LQ99459 802 aaKnown RBP11.46□□□□□ -0.57
CCDC59-207ENST00000552606 RFX5P48382 616 aaPredicted RBP11.45□□□□□ -0.58
CCDC59-207ENST00000552606 CC2D2BQ6DHV5 1058 aa11.45□□□□□ -0.58
CCDC59-207ENST00000552606 ANKRD18AQ8IVF6 992 aa11.45□□□□□ -0.58
CCDC59-207ENST00000552606 SP8Q8IXZ3 490 aa11.45□□□□□ -0.58
CCDC59-207ENST00000552606 COG6Q9Y2V7 657 aa11.45□□□□□ -0.58
CCDC59-207ENST00000552606 ANKRD18BA2A2Z9 1011 aa11.44□□□□□ -0.58
CCDC59-207ENST00000552606 CENPBP07199 599 aaPredicted RBP11.44□□□□□ -0.58
CCDC59-207ENST00000552606 IFIT5Q13325 482 aaKnown RBP11.44□□□□□ -0.58
CCDC59-207ENST00000552606 PSMD1Q99460 953 aa11.44□□□□□ -0.58
CCDC59-207ENST00000552606 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
CCDC59-207ENST00000552606 TAOK3Q9H2K8 898 aa11.44□□□□□ -0.58
CCDC59-207ENST00000552606 BSDC1Q9NW68 430 aaPredicted RBP11.44□□□□□ -0.58
CCDC59-207ENST00000552606 DDX19BQ9UMR2 479 aa11.44□□□□□ -0.58
CCDC59-207ENST00000552606 WDR90Q96KV7 1748 aa11.43□□□□□ -0.58
CCDC59-207ENST00000552606 GNAI2P04899 355 aa11.43□□□□□ -0.58
CCDC59-207ENST00000552606 FKBP4Q02790 459 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC59-207ENST00000552606 GRIPAP1Q4V328 841 aa11.43□□□□□ -0.58
CCDC59-207ENST00000552606 ARHGAP27Q6ZUM4 889 aa11.43□□□□□ -0.58
CCDC59-207ENST00000552606 RTKN2Q8IZC4 609 aa11.43□□□□□ -0.58
CCDC59-207ENST00000552606 ZNF594Q96JF6 807 aaPredicted RBP11.43□□□□□ -0.58
CCDC59-207ENST00000552606 ZBTB40Q9NUA8 1239 aa11.43□□□□□ -0.58
CCDC59-207ENST00000552606 PODXL2Q9NZ53 605 aa11.43□□□□□ -0.58
CCDC59-207ENST00000552606 HDAC5Q9UQL6 1122 aa11.43□□□□□ -0.58
CCDC59-207ENST00000552606 CHMP3Q9Y3E7 222 aa11.43□□□□□ -0.58
CCDC59-207ENST00000552606 SCN4AP35499 1836 aa11.42□□□□□ -0.58
CCDC59-207ENST00000552606 IGHMBP2P38935 993 aaKnown RBP11.42□□□□□ -0.58
CCDC59-207ENST00000552606 GPSM2P81274 684 aa11.42□□□□□ -0.58
CCDC59-207ENST00000552606 CCDC57Q2TAC2 916 aa11.42□□□□□ -0.58
CCDC59-207ENST00000552606 KLHDC4Q8TBB5 520 aa11.42□□□□□ -0.58
CCDC59-207ENST00000552606 C1orf115Q9H7X2 142 aa11.42□□□□□ -0.58
CCDC59-207ENST00000552606 MINPP1Q9UNW1 487 aa11.42□□□□□ -0.58
CCDC59-207ENST00000552606 XDHP47989 1333 aa11.41□□□□□ -0.58
CCDC59-207ENST00000552606 IRS2Q9Y4H2 1338 aa11.41□□□□□ -0.58
CCDC59-207ENST00000552606 PNMA6EA0A0J9YXQ4 647 aa11.41□□□□□ -0.58
CCDC59-207ENST00000552606 PTPN12Q05209 780 aaKnown RBP11.41□□□□□ -0.58
CCDC59-207ENST00000552606 VGLL2Q8N8G2 317 aa11.41□□□□□ -0.58
CCDC59-207ENST00000552606 PUS3Q9BZE2 481 aaKnown RBP11.41□□□□□ -0.58
CCDC59-207ENST00000552606 ZC3H4Q9UPT8 1303 aaKnown RBP11.4□□□□□ -0.58
CCDC59-207ENST00000552606 LMNB1P20700 586 aa11.4□□□□□ -0.58
CCDC59-207ENST00000552606 CHRNDQ07001 517 aa11.4□□□□□ -0.58
CCDC59-207ENST00000552606 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
CCDC59-207ENST00000552606 DPP8Q6V1X1 898 aaPredicted RBP11.4□□□□□ -0.58
CCDC59-207ENST00000552606 MPNDQ8N594 471 aa11.4□□□□□ -0.58
CCDC59-207ENST00000552606 MPHOSPH8Q99549 860 aa11.4□□□□□ -0.58
CCDC59-207ENST00000552606 COPRSQ9NQ92 184 aa11.4□□□□□ -0.58
CCDC59-207ENST00000552606 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
CCDC59-207ENST00000552606 POLLQ9UGP5 575 aa11.4□□□□□ -0.58
CCDC59-207ENST00000552606 RIPOR2Q9Y4F9 1068 aa11.4□□□□□ -0.58
CCDC59-207ENST00000552606 MED23Q9ULK4 1368 aa11.4□□□□□ -0.59
CCDC59-207ENST00000552606 ECM29Q5VYK3 1845 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 AKAP11Q9UKA4 1901 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 ZNF609O15014 1411 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 SRGAP3O43295 1099 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
CCDC59-207ENST00000552606 LRRC24Q50LG9 513 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 C9orf131Q5VYM1 1079 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 ATG9AQ7Z3C6 839 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 TBC1D16Q8TBP0 767 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 SSH3Q8TE77 659 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 CRBNQ96SW2 442 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 RNF181Q9P0P0 153 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 NSFL1CQ9UNZ2 370 aaKnown RBP11.39□□□□□ -0.59
CCDC59-207ENST00000552606 PA2G4Q9UQ80 394 aaKnown RBP11.39□□□□□ -0.59
CCDC59-207ENST00000552606 SUPT16HQ9Y5B9 1047 aaKnown RBP11.39□□□□□ -0.59
CCDC59-207ENST00000552606 ADAMTSL1Q8N6G6 1762 aa11.39□□□□□ -0.59
CCDC59-207ENST00000552606 WTIPA6NIX2 430 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms