RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 GPSM2P81274 684 aa16.83■□□□□ 0.28
CACNB3-221ENST00000552022 SCARF1Q14162 830 aa16.83■□□□□ 0.28
CACNB3-221ENST00000552022 PROSER3Q2NL68 480 aa16.83■□□□□ 0.28
CACNB3-221ENST00000552022 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.28
CACNB3-221ENST00000552022 R3HDMLQ9H3Y0 253 aa16.83■□□□□ 0.28
CACNB3-221ENST00000552022 TRMT112Q9UI30 125 aaKnown RBP16.83■□□□□ 0.28
CACNB3-221ENST00000552022 KIAA0100Q14667 2235 aaKnown RBP16.82■□□□□ 0.28
CACNB3-221ENST00000552022 SH3TC1Q8TE82 1336 aa16.82■□□□□ 0.28
CACNB3-221ENST00000552022 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
CACNB3-221ENST00000552022 ANXA1P04083 346 aa16.82■□□□□ 0.28
CACNB3-221ENST00000552022 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
CACNB3-221ENST00000552022 ZNF280AP59817 542 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-221ENST00000552022 TCIRG1Q13488 830 aa16.81■□□□□ 0.28
CACNB3-221ENST00000552022 ZNF428Q96B54 188 aa16.81■□□□□ 0.28
CACNB3-221ENST00000552022 SCAF8Q9UPN6 1271 aaKnown RBP16.81■□□□□ 0.28
CACNB3-221ENST00000552022 PSME4Q14997 1843 aa16.81■□□□□ 0.28
CACNB3-221ENST00000552022 RBBP6Q7Z6E9 1792 aaKnown RBP16.81■□□□□ 0.28
CACNB3-221ENST00000552022 FKTNO75072 461 aa16.8■□□□□ 0.28
CACNB3-221ENST00000552022 EIF2S2P20042 333 aaKnown RBP16.8■□□□□ 0.28
CACNB3-221ENST00000552022 HSP90AB3PQ58FF7 597 aa16.8■□□□□ 0.28
CACNB3-221ENST00000552022 TBC1D16Q8TBP0 767 aa16.8■□□□□ 0.28
CACNB3-221ENST00000552022 PRAMEF18Q5VWM3 479 aa16.79■□□□□ 0.28
CACNB3-221ENST00000552022 COPS6Q7L5N1 327 aa16.79■□□□□ 0.28
CACNB3-221ENST00000552022 EYA3Q99504 573 aa16.79■□□□□ 0.28
CACNB3-221ENST00000552022 CFHR5Q9BXR6 569 aa16.79■□□□□ 0.28
CACNB3-221ENST00000552022 SZT2Q5T011 3432 aa16.79■□□□□ 0.28
CACNB3-221ENST00000552022 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
CACNB3-221ENST00000552022 SF3B3Q15393 1217 aaKnown RBP16.78■□□□□ 0.28
CACNB3-221ENST00000552022 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
CACNB3-221ENST00000552022 PITPNM2Q9BZ72 1349 aa16.77■□□□□ 0.28
CACNB3-221ENST00000552022 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
CACNB3-221ENST00000552022 TRIM26Q12899 539 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-221ENST00000552022 AIMP1Q12904 312 aaKnown RBP16.77■□□□□ 0.28
CACNB3-221ENST00000552022 RSBN1LQ6PCB5 846 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-221ENST00000552022 AGBL3Q8NEM8 1001 aa16.77■□□□□ 0.28
CACNB3-221ENST00000552022 XAGE3Q8WTP9 111 aa16.77■□□□□ 0.28
CACNB3-221ENST00000552022 GMLQ99445 158 aa16.77■□□□□ 0.28
CACNB3-221ENST00000552022 ZC3H12CQ9C0D7 883 aaKnown RBP16.77■□□□□ 0.28
CACNB3-221ENST00000552022 ZNF609O15014 1411 aa16.77■□□□□ 0.27
CACNB3-221ENST00000552022 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
CACNB3-221ENST00000552022 MYOZ2Q9NPC6 264 aa16.76■□□□□ 0.27
CACNB3-221ENST00000552022 USP17L8P0C7I0 530 aa16.75■□□□□ 0.27
CACNB3-221ENST00000552022 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
CACNB3-221ENST00000552022 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
CACNB3-221ENST00000552022 RPS8P62241 208 aaKnown RBP16.74■□□□□ 0.27
CACNB3-221ENST00000552022 SREBF2Q12772 1141 aa16.74■□□□□ 0.27
CACNB3-221ENST00000552022 TTLL12Q14166 644 aaPredicted RBP16.74■□□□□ 0.27
CACNB3-221ENST00000552022 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
CACNB3-221ENST00000552022 PLEKHF1Q96S99 279 aa16.74■□□□□ 0.27
CACNB3-221ENST00000552022 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
CACNB3-221ENST00000552022 COLQQ9Y215 455 aaPredicted RBP16.74■□□□□ 0.27
CACNB3-221ENST00000552022 G3V3G9 751 aa16.73■□□□□ 0.27
CACNB3-221ENST00000552022 EN2P19622 333 aaPredicted RBP16.73■□□□□ 0.27
CACNB3-221ENST00000552022 PTPN12Q05209 780 aaKnown RBP16.73■□□□□ 0.27
CACNB3-221ENST00000552022 NFE2L2Q16236 605 aa16.73■□□□□ 0.27
CACNB3-221ENST00000552022 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
CACNB3-221ENST00000552022 DCAF8Q5TAQ9 597 aa16.73■□□□□ 0.27
CACNB3-221ENST00000552022 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
CACNB3-221ENST00000552022 TSPYL4Q9UJ04 414 aa16.73■□□□□ 0.27
CACNB3-221ENST00000552022 UFL1O94874 794 aa16.72■□□□□ 0.27
CACNB3-221ENST00000552022 TRIOBPQ9H2D6 2365 aa16.72■□□□□ 0.27
CACNB3-221ENST00000552022 NEFMP07197 916 aa16.71■□□□□ 0.27
CACNB3-221ENST00000552022 CEP290O15078 2479 aa16.71■□□□□ 0.26
CACNB3-221ENST00000552022 ALDH1A1P00352 501 aa16.7■□□□□ 0.26
CACNB3-221ENST00000552022 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
CACNB3-221ENST00000552022 ISCA1Q9BUE6 129 aa16.7■□□□□ 0.26
CACNB3-221ENST00000552022 ANKIB1Q9P2G1 1089 aa16.7■□□□□ 0.26
CACNB3-221ENST00000552022 GGA1Q9UJY5 639 aa16.7■□□□□ 0.26
CACNB3-221ENST00000552022 PTPN22Q9Y2R2 807 aa16.7■□□□□ 0.26
CACNB3-221ENST00000552022 ZNF646O15015 1829 aaPredicted RBP16.7■□□□□ 0.26
CACNB3-221ENST00000552022 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
CACNB3-221ENST00000552022 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
CACNB3-221ENST00000552022 LDLRAD1Q5T700 205 aa16.69■□□□□ 0.26
CACNB3-221ENST00000552022 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
CACNB3-221ENST00000552022 LAMB1P07942 1786 aa16.69■□□□□ 0.26
CACNB3-221ENST00000552022 USP17L3A6NCW0 530 aa16.68■□□□□ 0.26
CACNB3-221ENST00000552022 USP17L4A6NCW7 530 aa16.68■□□□□ 0.26
CACNB3-221ENST00000552022 IRS4O14654 1257 aaPredicted RBP16.68■□□□□ 0.26
CACNB3-221ENST00000552022 NF2P35240 595 aa16.68■□□□□ 0.26
CACNB3-221ENST00000552022 PRKG1Q13976 671 aa16.68■□□□□ 0.26
CACNB3-221ENST00000552022 USP17L1Q7RTZ2 530 aa16.68■□□□□ 0.26
CACNB3-221ENST00000552022 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
CACNB3-221ENST00000552022 ARMC5Q96C12 935 aa16.68■□□□□ 0.26
CACNB3-221ENST00000552022 WNT10BO00744 389 aa16.67■□□□□ 0.26
CACNB3-221ENST00000552022 ARMC9Q7Z3E5 817 aa16.67■□□□□ 0.26
CACNB3-221ENST00000552022 PODNQ7Z5L7 613 aa16.67■□□□□ 0.26
CACNB3-221ENST00000552022 PLBD2Q8NHP8 589 aa16.67■□□□□ 0.26
CACNB3-221ENST00000552022 INHBEP58166 350 aa16.66■□□□□ 0.26
CACNB3-221ENST00000552022 CAP1Q01518 475 aa16.66■□□□□ 0.26
CACNB3-221ENST00000552022 ANKRD13DQ6ZTN6 518 aa16.66■□□□□ 0.26
CACNB3-221ENST00000552022 OTUD5Q96G74 571 aa16.66■□□□□ 0.26
CACNB3-221ENST00000552022 MXD3Q9BW11 206 aa16.66■□□□□ 0.26
CACNB3-221ENST00000552022 FZD1Q9UP38 647 aa16.66■□□□□ 0.26
CACNB3-221ENST00000552022 MANSC4A6NHS7 340 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-221ENST00000552022 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
CACNB3-221ENST00000552022 CD99L2Q8TCZ2 262 aa16.65■□□□□ 0.26
CACNB3-221ENST00000552022 BABAM1Q9NWV8 329 aa16.65■□□□□ 0.26
CACNB3-221ENST00000552022 ANGEL1Q9UNK9 670 aaKnown RBP16.65■□□□□ 0.26
CACNB3-221ENST00000552022 WTIPA6NIX2 430 aaPredicted RBP16.64■□□□□ 0.25
CACNB3-221ENST00000552022 DLL1O00548 723 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms