RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 PSMD1Q99460 953 aa13.35□□□□□ -0.27
PTCH1-225ENST00000551845 NSFL1CQ9UNZ2 370 aaKnown RBP13.35□□□□□ -0.27
PTCH1-225ENST00000551845 CNTNAP1P78357 1384 aa13.34□□□□□ -0.27
PTCH1-225ENST00000551845 FAM161AQ3B820 660 aa13.34□□□□□ -0.27
PTCH1-225ENST00000551845 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
PTCH1-225ENST00000551845 DZIP1LQ8IYY4 767 aaKnown RBP13.34□□□□□ -0.27
PTCH1-225ENST00000551845 SUCLG2Q96I99 432 aa13.34□□□□□ -0.27
PTCH1-225ENST00000551845 MPHOSPH8Q99549 860 aa13.34□□□□□ -0.27
PTCH1-225ENST00000551845 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
PTCH1-225ENST00000551845 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-225ENST00000551845 UBTFL1P0CB47 393 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-225ENST00000551845 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
PTCH1-225ENST00000551845 POTEJP0CG39 1038 aa13.33□□□□□ -0.28
PTCH1-225ENST00000551845 LBX1P52954 281 aa13.33□□□□□ -0.28
PTCH1-225ENST00000551845 EPHA10Q5JZY3 1008 aa13.33□□□□□ -0.28
PTCH1-225ENST00000551845 JDP2Q8WYK2 163 aa13.33□□□□□ -0.28
PTCH1-225ENST00000551845 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-225ENST00000551845 ANKRD31Q8N7Z5 1873 aa13.32□□□□□ -0.28
PTCH1-225ENST00000551845 DDNO94850 711 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-225ENST00000551845 GNAI3P08754 354 aa13.32□□□□□ -0.28
PTCH1-225ENST00000551845 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
PTCH1-225ENST00000551845 VEGFBP49765 207 aa13.32□□□□□ -0.28
PTCH1-225ENST00000551845 TAF7LQ5H9L4 462 aa13.32□□□□□ -0.28
PTCH1-225ENST00000551845 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
PTCH1-225ENST00000551845 RTFDC1Q9BY42 306 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-225ENST00000551845 ANKIB1Q9P2G1 1089 aa13.32□□□□□ -0.28
PTCH1-225ENST00000551845 DICER1Q9UPY3 1922 aaKnown RBP13.32□□□□□ -0.28
PTCH1-225ENST00000551845 CACNA1FO60840 1977 aa13.32□□□□□ -0.28
PTCH1-225ENST00000551845 ARFGEF2Q9Y6D5 1785 aa13.32□□□□□ -0.28
PTCH1-225ENST00000551845 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
PTCH1-225ENST00000551845 C6orf229H3BNL8 230 aa13.31□□□□□ -0.28
PTCH1-225ENST00000551845 LARGE2Q8N3Y3 721 aa13.31□□□□□ -0.28
PTCH1-225ENST00000551845 TMEM57Q8N5G2 664 aa13.31□□□□□ -0.28
PTCH1-225ENST00000551845 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.31□□□□□ -0.28
PTCH1-225ENST00000551845 BICC1Q9H694 974 aaKnown RBP13.31□□□□□ -0.28
PTCH1-225ENST00000551845 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
PTCH1-225ENST00000551845 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
PTCH1-225ENST00000551845 GPSM2P81274 684 aa13.3□□□□□ -0.28
PTCH1-225ENST00000551845 WASHC4Q2M389 1173 aa13.3□□□□□ -0.28
PTCH1-225ENST00000551845 RABL6Q3YEC7 729 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-225ENST00000551845 LDHAL6AQ6ZMR3 332 aa13.3□□□□□ -0.28
PTCH1-225ENST00000551845 ABHD8Q96I13 439 aa13.3□□□□□ -0.28
PTCH1-225ENST00000551845 EYA3Q99504 573 aa13.3□□□□□ -0.28
PTCH1-225ENST00000551845 ANKRD2Q9GZV1 360 aa13.3□□□□□ -0.28
PTCH1-225ENST00000551845 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
PTCH1-225ENST00000551845 IQCA1LA6NCM1 817 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 TMEM88BA6NKF7 163 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 PPIP5K2O43314 1243 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 ATP2B4P23634 1241 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 LDHDQ86WU2 507 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 TBC1D16Q8TBP0 767 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 MEIS3Q99687 375 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 ZC3H12CQ9C0D7 883 aaKnown RBP13.29□□□□□ -0.28
PTCH1-225ENST00000551845 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 ANKRD36CQ5JPF3 1778 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 FER1L6Q2WGJ9 1857 aa13.29□□□□□ -0.28
PTCH1-225ENST00000551845 SLX4Q8IY92 1834 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 GNAI2P04899 355 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 EAPPQ56P03 285 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-225ENST00000551845 SLC51AQ86UW1 340 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 ITPRIPQ8IWB1 547 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 NIM1KQ8IY84 436 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 ANKRD44Q8N8A2 993 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
PTCH1-225ENST00000551845 CNNM1Q9NRU3 951 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 WBP1LQ9NX94 342 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 POLLQ9UGP5 575 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 LRRFIP2Q9Y608 721 aaKnown RBP13.28□□□□□ -0.28
PTCH1-225ENST00000551845 XDHP47989 1333 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 PASKQ96RG2 1323 aa13.28□□□□□ -0.28
PTCH1-225ENST00000551845 CCDC85CA6NKD9 419 aa13.27□□□□□ -0.29
PTCH1-225ENST00000551845 G3V3G9 751 aa13.27□□□□□ -0.29
PTCH1-225ENST00000551845 RIMBP2O15034 1052 aa13.27□□□□□ -0.29
PTCH1-225ENST00000551845 ZBTB7BO15156 539 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-225ENST00000551845 PLIN1O60240 522 aa13.27□□□□□ -0.29
PTCH1-225ENST00000551845 HSPA8P11142 646 aaKnown RBP13.27□□□□□ -0.29
PTCH1-225ENST00000551845 EIF6P56537 245 aaKnown RBP13.27□□□□□ -0.29
PTCH1-225ENST00000551845 MLLT1Q03111 559 aaPredicted RBP13.27□□□□□ -0.29
PTCH1-225ENST00000551845 KIAA2012Q0VF49 1180 aa13.27□□□□□ -0.29
PTCH1-225ENST00000551845 AOC3Q16853 763 aa13.27□□□□□ -0.29
PTCH1-225ENST00000551845 DCAF8Q5TAQ9 597 aa13.27□□□□□ -0.29
PTCH1-225ENST00000551845 CHMP4BQ9H444 224 aaKnown RBP13.27□□□□□ -0.29
PTCH1-225ENST00000551845 LEMD3Q9Y2U8 911 aa13.27□□□□□ -0.29
PTCH1-225ENST00000551845 FZD9O00144 591 aa13.26□□□□□ -0.29
PTCH1-225ENST00000551845 UFL1O94874 794 aa13.26□□□□□ -0.29
PTCH1-225ENST00000551845 RLBP1P12271 317 aa13.26□□□□□ -0.29
PTCH1-225ENST00000551845 CHRNDQ07001 517 aa13.26□□□□□ -0.29
PTCH1-225ENST00000551845 CACNA1SQ13698 1873 aa13.26□□□□□ -0.29
PTCH1-225ENST00000551845 DEFB115Q30KQ5 88 aa13.26□□□□□ -0.29
PTCH1-225ENST00000551845 PANK1Q8TE04 598 aa13.26□□□□□ -0.29
PTCH1-225ENST00000551845 TAF1DQ9H5J8 278 aaPredicted RBP13.26□□□□□ -0.29
PTCH1-225ENST00000551845 PCDH10Q9P2E7 1040 aa13.26□□□□□ -0.29
PTCH1-225ENST00000551845 ZNRF3Q9ULT6 936 aa13.26□□□□□ -0.29
PTCH1-225ENST00000551845 SCN4AP35499 1836 aa13.25□□□□□ -0.29
PTCH1-225ENST00000551845 COL11A2P13942 1736 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-225ENST00000551845 KCNJ4P48050 445 aa13.25□□□□□ -0.29
PTCH1-225ENST00000551845 MAP2K1Q02750 393 aaPredicted RBP13.25□□□□□ -0.29
PTCH1-225ENST00000551845 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
PTCH1-225ENST00000551845 SNED1Q8TER0 1413 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms