RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 MSL1Q68DK7 614 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 KLHDC4Q8TBB5 520 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 ANKRD2Q9GZV1 360 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 STAP2Q9UGK3 403 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 MINPP1Q9UNW1 487 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 PA2G4Q9UQ80 394 aaKnown RBP9.39□□□□□ -0.91
USP44-206ENST00000551837 EXOC6BQ9Y2D4 811 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 ZBTB12Q9Y330 459 aaPredicted RBP9.39□□□□□ -0.91
USP44-206ENST00000551837 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 COL24A1Q17RW2 1714 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 NRXN2Q9P2S2 1712 aa9.39□□□□□ -0.91
USP44-206ENST00000551837 EP400Q96L91 3159 aa9.38□□□□□ -0.91
USP44-206ENST00000551837 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
USP44-206ENST00000551837 ZBTB7AO95365 584 aa9.38□□□□□ -0.91
USP44-206ENST00000551837 FGFR2P21802 821 aa9.38□□□□□ -0.91
USP44-206ENST00000551837 KCNA3P22001 575 aa9.38□□□□□ -0.91
USP44-206ENST00000551837 FXR2P51116 673 aaKnown RBP eCLIP9.38□□□□□ -0.91
USP44-206ENST00000551837 VGLL2Q8N8G2 317 aa9.38□□□□□ -0.91
USP44-206ENST00000551837 RPGRQ92834 1020 aaKnown RBP9.38□□□□□ -0.91
USP44-206ENST00000551837 CELF1Q92879 486 aaKnown RBP9.38□□□□□ -0.91
USP44-206ENST00000551837 ZNF594Q96JF6 807 aaPredicted RBP9.38□□□□□ -0.91
USP44-206ENST00000551837 PUS3Q9BZE2 481 aaKnown RBP9.38□□□□□ -0.91
USP44-206ENST00000551837 CNNM1Q9NRU3 951 aa9.38□□□□□ -0.91
USP44-206ENST00000551837 PODXL2Q9NZ53 605 aa9.38□□□□□ -0.91
USP44-206ENST00000551837 ATF5Q9Y2D1 282 aaPredicted RBP9.38□□□□□ -0.91
USP44-206ENST00000551837 LEMD3Q9Y2U8 911 aa9.38□□□□□ -0.91
USP44-206ENST00000551837 TFCP2Q12800 502 aa9.37□□□□□ -0.91
USP44-206ENST00000551837 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
USP44-206ENST00000551837 C15orf52Q6ZUT6 534 aaKnown RBP9.37□□□□□ -0.91
USP44-206ENST00000551837 TICAM2Q86XR7 235 aa9.37□□□□□ -0.91
USP44-206ENST00000551837 C2CD5Q86YS7 1000 aa9.37□□□□□ -0.91
USP44-206ENST00000551837 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
USP44-206ENST00000551837 C7orf43Q8WVR3 580 aa9.37□□□□□ -0.91
USP44-206ENST00000551837 EAF2Q96CJ1 260 aaPredicted RBP9.37□□□□□ -0.91
USP44-206ENST00000551837 ZNF512BQ96KM6 892 aaPredicted RBP9.37□□□□□ -0.91
USP44-206ENST00000551837 CCDC85AQ96PX6 553 aaPredicted RBP9.37□□□□□ -0.91
USP44-206ENST00000551837 VPS33BQ9H267 617 aa9.37□□□□□ -0.91
USP44-206ENST00000551837 ATP6V0A2Q9Y487 856 aa9.37□□□□□ -0.91
USP44-206ENST00000551837 TTC41PQ6P2S7 1318 aa9.36□□□□□ -0.91
USP44-206ENST00000551837 SALL3Q9BXA9 1300 aa9.36□□□□□ -0.91
USP44-206ENST00000551837 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
USP44-206ENST00000551837 OS9Q13438 667 aaPredicted RBP9.36□□□□□ -0.91
USP44-206ENST00000551837 TNNI3KQ59H18 835 aa9.36□□□□□ -0.91
USP44-206ENST00000551837 PLEKHM2Q8IWE5 1019 aa9.36□□□□□ -0.91
USP44-206ENST00000551837 C16orf71Q8IYS4 520 aaPredicted RBP9.36□□□□□ -0.91
USP44-206ENST00000551837 LPIN2Q92539 896 aa9.36□□□□□ -0.91
USP44-206ENST00000551837 LNPKQ9C0E8 428 aa9.36□□□□□ -0.91
USP44-206ENST00000551837 SIL1Q9H173 461 aa9.36□□□□□ -0.91
USP44-206ENST00000551837 FPGT-TNNI3KV9GXZ4 949 aa9.36□□□□□ -0.91
USP44-206ENST00000551837 AFDNP55196 1824 aaKnown RBP9.35□□□□□ -0.91
USP44-206ENST00000551837 TUBGCP6Q96RT7 1819 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 IGSF3O75054 1194 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 ATP2B4P23634 1241 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 TIMM10P62072 90 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 CHRNDQ07001 517 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 METTL24Q5JXM2 366 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 C10orf71Q711Q0 1435 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 TTLL6Q8N841 843 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP44-206ENST00000551837 TMX4Q9H1E5 349 aaPredicted RBP9.35□□□□□ -0.91
USP44-206ENST00000551837 IL1RAPL2Q9NP60 686 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 PIM2Q9P1W9 311 aa9.35□□□□□ -0.91
USP44-206ENST00000551837 AOX1Q06278 1338 aa9.34□□□□□ -0.91
USP44-206ENST00000551837 A0A1B0GUL7 405 aa9.34□□□□□ -0.91
USP44-206ENST00000551837 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.91
USP44-206ENST00000551837 IFIT2P09913 472 aaKnown RBP9.34□□□□□ -0.91
USP44-206ENST00000551837 IFIT1P09914 478 aaKnown RBP9.34□□□□□ -0.91
USP44-206ENST00000551837 ATP5JP18859 108 aa9.34□□□□□ -0.91
USP44-206ENST00000551837 PDE4AP27815 886 aa9.34□□□□□ -0.91
USP44-206ENST00000551837 PDE1AP54750 535 aa9.34□□□□□ -0.91
USP44-206ENST00000551837 PUM3Q15397 648 aaKnown RBP9.34□□□□□ -0.91
USP44-206ENST00000551837 ZNF622Q969S3 477 aaKnown RBP eCLIP9.34□□□□□ -0.91
USP44-206ENST00000551837 RTFDC1Q9BY42 306 aaPredicted RBP9.34□□□□□ -0.91
USP44-206ENST00000551837 ECHDC1Q9NTX5 307 aa9.34□□□□□ -0.91
USP44-206ENST00000551837 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
USP44-206ENST00000551837 CASZ1Q86V15 1759 aa9.34□□□□□ -0.91
USP44-206ENST00000551837 DDX60Q8IY21 1712 aaKnown RBP9.34□□□□□ -0.92
USP44-206ENST00000551837 XDHP47989 1333 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 A0A0G2JLW4 131 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 ERC2O15083 957 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 DPEP1P16444 411 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 MX1P20591 662 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 EVX2Q03828 476 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 CCDC158Q5M9N0 1113 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 SOGA3Q5TF21 947 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 AACSQ86V21 672 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 XAGE2Q96GT9 111 aa9.33□□□□□ -0.92
USP44-206ENST00000551837 ZNF804BA4D1E1 1349 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 APBB1O00213 710 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
USP44-206ENST00000551837 GLRX3O76003 335 aaKnown RBP9.32□□□□□ -0.92
USP44-206ENST00000551837 UQCRFS1P1P0C7P4 283 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 SLC5A1P13866 664 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 CHRNA5P30532 468 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 ATP2B3Q16720 1220 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 CAVIN4Q5BKX8 364 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 BMP2KLQ5H9B9 411 aa9.32□□□□□ -0.92
USP44-206ENST00000551837 FBXO33Q7Z6M2 555 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms