RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 MYH14Q7Z406 1995 aaKnown RBP9.71□□□□□ -0.86
RAB3IP-215ENST00000551641 NECTIN1Q15223 517 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 VPS53Q5VIR6 699 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 KLHDC4Q8TBB5 520 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 SUCLG2Q96I99 432 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 SIL1Q9H173 461 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 WWC3Q9ULE0 1092 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 NOL7Q9UMY1 257 aaKnown RBP9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 SASH1O94885 1247 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 ZSCAN22P10073 491 aaPredicted RBP9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 HCLS1P14317 486 aaPredicted RBP9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 GCKRQ14397 625 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 USP48Q86UV5 1035 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 NAP1L5Q96NT1 182 aaPredicted RBP9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 ZSWIM6Q9HCJ5 1215 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 PA2G4Q9UQ80 394 aaKnown RBP9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 SBF2Q86WG5 1849 aa9.7□□□□□ -0.86
RAB3IP-215ENST00000551641 RPS6KA4O75676 772 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 IFIT2P09913 472 aaKnown RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 CACNB1Q02641 598 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 PTH1RQ03431 593 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 TCIRG1Q13488 830 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 CWC25Q9NXE8 425 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 HIP1O00291 1037 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 TBC1D9BQ66K14 1250 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 GIGYF2Q6Y7W6 1299 aaKnown RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 CCDC171Q6TFL3 1326 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 UBR2Q8IWV8 1755 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 STX6O43752 255 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 ZNF500O60304 480 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 GADD45BO75293 160 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 CAMTA2O94983 1202 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 SYT1P21579 422 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 EPHA10Q5JZY3 1008 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 ILDR2Q71H61 639 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 AACSQ86V21 672 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 ZSCAN31Q96LW9 406 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 TSPY26PQ9H489 355 aa9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 BICC1Q9H694 974 aaKnown RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 SH2B1Q9NRF2 756 aaPredicted RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.69□□□□□ -0.86
RAB3IP-215ENST00000551641 NHSQ6T4R5 1651 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 PSDA5PKW4 1024 aaPredicted RBP9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 CASTP20810 708 aaKnown RBP9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 SUSD4Q5VX71 490 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 MAP4K1Q92918 833 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 EAF2Q96CJ1 260 aaPredicted RBP9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 UTRNP46939 3433 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 PAPPAQ13219 1627 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 OFD1O75665 1012 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 F13A1P00488 732 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 MCM5P33992 734 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 ADCK5Q3MIX3 580 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 SLC27A3Q5K4L6 730 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 UBN2Q6ZU65 1347 aa9.68□□□□□ -0.86
RAB3IP-215ENST00000551641 PLSCR1O15162 318 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 LARGE1O95461 756 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 MSNP26038 577 aaKnown RBP9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 COL23A1Q86Y22 540 aaPredicted RBP9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 PDRG1Q9NUG6 133 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 SMC3Q9UQE7 1217 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 CYP46A1Q9Y6A2 500 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 MED23Q9ULK4 1368 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 TJP1Q07157 1748 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 ST3GAL1Q11201 340 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 G3BP1Q13283 466 aaKnown RBP eCLIP9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 PRPF40BQ6NWY9 871 aaKnown RBP9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 LMBR1LQ6UX01 489 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 NLRP10Q86W26 655 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 JAKMIP1Q96N16 626 aaKnown RBP9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 CAMKK2Q96RR4 588 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 SETDB2Q96T68 719 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 ALDH8A1Q9H2A2 487 aaPredicted RBP9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 GDPD2Q9HCC8 539 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 STK32BQ9NY57 414 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 ATP6V1DQ9Y5K8 247 aa9.67□□□□□ -0.86
RAB3IP-215ENST00000551641 CNTNAP4Q9C0A0 1308 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 TERF1P54274 439 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 UBE2HP62256 183 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 NBPF5PQ86XG9 351 aaPredicted RBP9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 FAM184AQ8NB25 1140 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 ZNF594Q96JF6 807 aaPredicted RBP9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 PPP1R1BQ9UD71 204 aaPredicted RBP9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 ZNF652Q9Y2D9 606 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 ZKSCAN5Q9Y2L8 839 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 LETM1O95202 739 aaPredicted RBP9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 CPA1P15085 419 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 UVSSAQ2YD98 709 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 CCDC183Q5T5S1 534 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 CREB3L3Q68CJ9 461 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 BCL2L12Q9HB09 334 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 CNPY2Q9Y2B0 182 aa9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 RBM8AQ9Y5S9 174 aaKnown RBP9.66□□□□□ -0.86
RAB3IP-215ENST00000551641 IRS4O14654 1257 aaPredicted RBP9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 TPM2P07951 284 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 ZKSCAN1P17029 563 aaPredicted RBP9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 NMIQ13287 307 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms