RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 TBC1D16Q8TBP0 767 aa24.27■■□□□ 1.48
RPAP3-207ENST00000551293 CCDC102AQ96A19 550 aa24.27■■□□□ 1.48
RPAP3-207ENST00000551293 BABAM1Q9NWV8 329 aa24.27■■□□□ 1.48
RPAP3-207ENST00000551293 HDGFL1Q5TGJ6 251 aa24.26■■□□□ 1.47
RPAP3-207ENST00000551293 ISCA1Q9BUE6 129 aa24.26■■□□□ 1.47
RPAP3-207ENST00000551293 RPS12P25398 132 aaKnown RBP24.25■■□□□ 1.47
RPAP3-207ENST00000551293 LMOD3Q0VAK6 560 aa24.25■■□□□ 1.47
RPAP3-207ENST00000551293 SULF1Q8IWU6 871 aa24.25■■□□□ 1.47
RPAP3-207ENST00000551293 CDCA5Q96FF9 252 aa24.25■■□□□ 1.47
RPAP3-207ENST00000551293 EYA3Q99504 573 aa24.25■■□□□ 1.47
RPAP3-207ENST00000551293 SCAF8Q9UPN6 1271 aaKnown RBP24.25■■□□□ 1.47
RPAP3-207ENST00000551293 POLR2AP24928 1970 aaKnown RBP24.24■■□□□ 1.47
RPAP3-207ENST00000551293 G3V3G9 751 aa24.24■■□□□ 1.47
RPAP3-207ENST00000551293 IRS4O14654 1257 aaPredicted RBP24.24■■□□□ 1.47
RPAP3-207ENST00000551293 DCAF8Q5TAQ9 597 aa24.24■■□□□ 1.47
RPAP3-207ENST00000551293 CSRNP1Q96S65 589 aa24.24■■□□□ 1.47
RPAP3-207ENST00000551293 SEC31BQ9NQW1 1179 aa24.24■■□□□ 1.47
RPAP3-207ENST00000551293 SAGE1Q9NXZ1 904 aa24.24■■□□□ 1.47
RPAP3-207ENST00000551293 CHL1O00533 1208 aa24.23■■□□□ 1.47
RPAP3-207ENST00000551293 SLC10A3P09131 477 aa24.23■■□□□ 1.47
RPAP3-207ENST00000551293 RPS8P62241 208 aaKnown RBP24.23■■□□□ 1.47
RPAP3-207ENST00000551293 ZC3H12CQ9C0D7 883 aaKnown RBP24.23■■□□□ 1.47
RPAP3-207ENST00000551293 UFL1O94874 794 aa24.22■■□□□ 1.47
RPAP3-207ENST00000551293 ANGEL2Q5VTE6 544 aaKnown RBP24.22■■□□□ 1.47
RPAP3-207ENST00000551293 JARID2Q92833 1246 aaPredicted RBP24.22■■□□□ 1.47
RPAP3-207ENST00000551293 CCDC85AQ96PX6 553 aaPredicted RBP24.22■■□□□ 1.47
RPAP3-207ENST00000551293 VIL1P09327 827 aaKnown RBP24.21■■□□□ 1.47
RPAP3-207ENST00000551293 SCARF1Q14162 830 aa24.21■■□□□ 1.47
RPAP3-207ENST00000551293 ANKIB1Q9P2G1 1089 aa24.21■■□□□ 1.47
RPAP3-207ENST00000551293 MOB2Q70IA6 237 aa24.2■■□□□ 1.46
RPAP3-207ENST00000551293 RASAL3Q86YV0 1011 aa24.19■■□□□ 1.46
RPAP3-207ENST00000551293 DBF4Q9UBU7 674 aaPredicted RBP24.19■■□□□ 1.46
RPAP3-207ENST00000551293 TRIM35Q9UPQ4 493 aa24.19■■□□□ 1.46
RPAP3-207ENST00000551293 SCN9AQ15858 1988 aa24.19■■□□□ 1.46
RPAP3-207ENST00000551293 PRAMEF18Q5VWM3 479 aa24.17■■□□□ 1.46
RPAP3-207ENST00000551293 CTU1Q7Z7A3 348 aaKnown RBP24.17■■□□□ 1.46
RPAP3-207ENST00000551293 GGA1Q9UJY5 639 aa24.17■■□□□ 1.46
RPAP3-207ENST00000551293 DUSP27Q5VZP5 1158 aa24.16■■□□□ 1.46
RPAP3-207ENST00000551293 RSBN1LQ6PCB5 846 aaPredicted RBP24.16■■□□□ 1.46
RPAP3-207ENST00000551293 RIC3Q7Z5B4 369 aa24.16■■□□□ 1.46
RPAP3-207ENST00000551293 PDE4DIPQ5VU43 2346 aa24.16■■□□□ 1.46
RPAP3-207ENST00000551293 ZNF280AP59817 542 aaPredicted RBP24.15■■□□□ 1.46
RPAP3-207ENST00000551293 MYD88Q99836 296 aa24.15■■□□□ 1.46
RPAP3-207ENST00000551293 HYPKQ9NX55 129 aa24.15■■□□□ 1.46
RPAP3-207ENST00000551293 PODXL2Q9NZ53 605 aa24.15■■□□□ 1.46
RPAP3-207ENST00000551293 WTIPA6NIX2 430 aaPredicted RBP24.14■■□□□ 1.45
RPAP3-207ENST00000551293 UBE2Q2LH0YL09 131 aa24.14■■□□□ 1.45
RPAP3-207ENST00000551293 TBC1D8O95759 1140 aa24.14■■□□□ 1.45
RPAP3-207ENST00000551293 PHAXQ9H814 394 aaKnown RBP24.14■■□□□ 1.45
RPAP3-207ENST00000551293 MKRN3Q13064 507 aaKnown RBP24.13■■□□□ 1.45
RPAP3-207ENST00000551293 ZBTB38Q8NAP3 1195 aaPredicted RBP24.13■■□□□ 1.45
RPAP3-207ENST00000551293 MYOZ2Q9NPC6 264 aa24.13■■□□□ 1.45
RPAP3-207ENST00000551293 HPS5Q9UPZ3 1129 aa24.13■■□□□ 1.45
RPAP3-207ENST00000551293 AKAP11Q9UKA4 1901 aa24.12■■□□□ 1.45
RPAP3-207ENST00000551293 ELL2O00472 640 aaPredicted RBP24.12■■□□□ 1.45
RPAP3-207ENST00000551293 USP17L8P0C7I0 530 aa24.12■■□□□ 1.45
RPAP3-207ENST00000551293 TRIM28Q13263 835 aaKnown RBP24.12■■□□□ 1.45
RPAP3-207ENST00000551293 AGBL3Q8NEM8 1001 aa24.12■■□□□ 1.45
RPAP3-207ENST00000551293 MXD3Q9BW11 206 aa24.12■■□□□ 1.45
RPAP3-207ENST00000551293 PCDH10Q9P2E7 1040 aa24.12■■□□□ 1.45
RPAP3-207ENST00000551293 GOLGA2Q08379 1002 aa24.11■■□□□ 1.45
RPAP3-207ENST00000551293 TTLL12Q14166 644 aaPredicted RBP24.11■■□□□ 1.45
RPAP3-207ENST00000551293 HDAC9Q9UKV0 1011 aa24.11■■□□□ 1.45
RPAP3-207ENST00000551293 HOXB7P09629 217 aa24.1■■□□□ 1.45
RPAP3-207ENST00000551293 RALBP1Q15311 655 aa24.1■■□□□ 1.45
RPAP3-207ENST00000551293 CCDC152Q4G0S7 254 aa24.1■■□□□ 1.45
RPAP3-207ENST00000551293 FBXW7Q969H0 707 aa24.1■■□□□ 1.45
RPAP3-207ENST00000551293 RUNDC1Q96C34 613 aa24.1■■□□□ 1.45
RPAP3-207ENST00000551293 MBIPQ9NS73 344 aa24.1■■□□□ 1.45
RPAP3-207ENST00000551293 NBPF9Q3BBW0 867 aa24.09■■□□□ 1.45
RPAP3-207ENST00000551293 ZNF296Q8WUU4 475 aaPredicted RBP24.09■■□□□ 1.45
RPAP3-207ENST00000551293 GMLQ99445 158 aa24.09■■□□□ 1.45
RPAP3-207ENST00000551293 USP17L3A6NCW0 530 aa24.08■■□□□ 1.45
RPAP3-207ENST00000551293 USP17L4A6NCW7 530 aa24.08■■□□□ 1.45
RPAP3-207ENST00000551293 USP17L1Q7RTZ2 530 aa24.08■■□□□ 1.45
RPAP3-207ENST00000551293 XDHP47989 1333 aa24.08■■□□□ 1.44
RPAP3-207ENST00000551293 WDR43Q15061 677 aaKnown RBP eCLIP24.07■■□□□ 1.44
RPAP3-207ENST00000551293 ANKRD18AQ8IVF6 992 aa24.07■■□□□ 1.44
RPAP3-207ENST00000551293 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.07■■□□□ 1.44
RPAP3-207ENST00000551293 PAPPA2Q9BXP8 1791 aa24.06■■□□□ 1.44
RPAP3-207ENST00000551293 PDE8AO60658 829 aa24.06■■□□□ 1.44
RPAP3-207ENST00000551293 FKBP1BP68106 108 aa24.06■■□□□ 1.44
RPAP3-207ENST00000551293 PRKG1Q13976 671 aa24.06■■□□□ 1.44
RPAP3-207ENST00000551293 REM2Q8IYK8 340 aaPredicted RBP24.06■■□□□ 1.44
RPAP3-207ENST00000551293 ADAMTS8Q9UP79 889 aa24.06■■□□□ 1.44
RPAP3-207ENST00000551293 PCCAP05165 728 aaPredicted RBP24.05■■□□□ 1.44
RPAP3-207ENST00000551293 PRPF38BQ5VTL8 546 aaKnown RBP24.05■■□□□ 1.44
RPAP3-207ENST00000551293 CWC25Q9NXE8 425 aaPredicted RBP24.05■■□□□ 1.44
RPAP3-207ENST00000551293 ATP2B4P23634 1241 aa24.04■■□□□ 1.44
RPAP3-207ENST00000551293 CCDC191Q8NCU4 936 aa24.04■■□□□ 1.44
RPAP3-207ENST00000551293 PITPNM2Q9BZ72 1349 aa24.04■■□□□ 1.44
RPAP3-207ENST00000551293 SASH1O94885 1247 aa24.03■■□□□ 1.44
RPAP3-207ENST00000551293 HSP90B1P14625 803 aaKnown RBP24.03■■□□□ 1.44
RPAP3-207ENST00000551293 PODNQ7Z5L7 613 aa24.03■■□□□ 1.44
RPAP3-207ENST00000551293 ZNF609O15014 1411 aa24.02■■□□□ 1.44
RPAP3-207ENST00000551293 R3HDMLQ9H3Y0 253 aa24.02■■□□□ 1.44
RPAP3-207ENST00000551293 MYBBP1AQ9BQG0 1328 aaKnown RBP24.02■■□□□ 1.44
RPAP3-207ENST00000551293 GPR25O00155 361 aa24.01■■□□□ 1.43
RPAP3-207ENST00000551293 FZD1Q9UP38 647 aa24.01■■□□□ 1.43
RPAP3-207ENST00000551293 WNT10BO00744 389 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms