RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 PCDHB15Q9Y5E8 787 aa14.53□□□□□ -0.08
PRPF40B-213ENST00000551269 DUOX1Q9NRD9 1551 aa14.52□□□□□ -0.08
PRPF40B-213ENST00000551269 SURF6O75683 361 aaKnown RBP14.52□□□□□ -0.09
PRPF40B-213ENST00000551269 G3BP1Q13283 466 aaKnown RBP eCLIP14.52□□□□□ -0.09
PRPF40B-213ENST00000551269 CCDC93Q567U6 631 aa14.52□□□□□ -0.09
PRPF40B-213ENST00000551269 HSP90AB4PQ58FF6 505 aa14.52□□□□□ -0.09
PRPF40B-213ENST00000551269 ERICH6BQ5W0A0 696 aa14.52□□□□□ -0.09
PRPF40B-213ENST00000551269 BSDC1Q9NW68 430 aaPredicted RBP14.52□□□□□ -0.09
PRPF40B-213ENST00000551269 AK9Q5TCS8 1911 aa14.52□□□□□ -0.09
PRPF40B-213ENST00000551269 PSME4Q14997 1843 aa14.52□□□□□ -0.09
PRPF40B-213ENST00000551269 MROH5Q6ZUA9 1318 aa14.51□□□□□ -0.09
PRPF40B-213ENST00000551269 EYA2O00167 538 aa14.51□□□□□ -0.09
PRPF40B-213ENST00000551269 CIAO1O76071 339 aa14.51□□□□□ -0.09
PRPF40B-213ENST00000551269 METTL24Q5JXM2 366 aa14.51□□□□□ -0.09
PRPF40B-213ENST00000551269 ERC1Q8IUD2 1116 aa14.51□□□□□ -0.09
PRPF40B-213ENST00000551269 RWDD1Q9H446 243 aaPredicted RBP14.51□□□□□ -0.09
PRPF40B-213ENST00000551269 ATP6V0A2Q9Y487 856 aa14.51□□□□□ -0.09
PRPF40B-213ENST00000551269 GOLGB1Q14789 3259 aaKnown RBP14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 XDHP47989 1333 aa14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 C21orf2O43822 256 aa14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 IL15P40933 162 aaPredicted RBP14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 KCNJ4P48050 445 aa14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 HDAC1Q13547 482 aaPredicted RBP14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 CC2D2BQ6DHV5 1058 aa14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 SIRT2Q8IXJ6 389 aa14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 ANKRD2Q9GZV1 360 aa14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 ANKIB1Q9P2G1 1089 aa14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 ZBTB47Q9UFB7 747 aaPredicted RBP14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 EXOC6BQ9Y2D4 811 aa14.5□□□□□ -0.09
PRPF40B-213ENST00000551269 ZNF609O15014 1411 aa14.49□□□□□ -0.09
PRPF40B-213ENST00000551269 SRCAPQ6ZRS2 3230 aa14.49□□□□□ -0.09
PRPF40B-213ENST00000551269 CHRNDQ07001 517 aa14.49□□□□□ -0.09
PRPF40B-213ENST00000551269 LRRC24Q50LG9 513 aa14.49□□□□□ -0.09
PRPF40B-213ENST00000551269 SP8Q8IXZ3 490 aa14.49□□□□□ -0.09
PRPF40B-213ENST00000551269 PUS3Q9BZE2 481 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-213ENST00000551269 APBB1O00213 710 aa14.48□□□□□ -0.09
PRPF40B-213ENST00000551269 GRIPAP1Q4V328 841 aa14.48□□□□□ -0.09
PRPF40B-213ENST00000551269 DPP8Q6V1X1 898 aaPredicted RBP14.48□□□□□ -0.09
PRPF40B-213ENST00000551269 CCDC136Q96JN2 1154 aa14.48□□□□□ -0.09
PRPF40B-213ENST00000551269 MINPP1Q9UNW1 487 aa14.48□□□□□ -0.09
PRPF40B-213ENST00000551269 DCAF8L1A6NGE4 600 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 RAB11FIP3O75154 756 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 UFL1O94874 794 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 GPR162Q16538 588 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 RTKN2Q8IZC4 609 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 MPNDQ8N594 471 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 GCC1Q96CN9 775 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 KIF1BPQ96EK5 621 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 CEP126Q9P2H0 1117 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 GGA1Q9UJY5 639 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 NSFL1CQ9UNZ2 370 aaKnown RBP14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 NOP58Q9Y2X3 529 aaKnown RBP14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 SNED1Q8TER0 1413 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 MYH7P12883 1935 aa14.47□□□□□ -0.09
PRPF40B-213ENST00000551269 ATP2B4P23634 1241 aa14.46□□□□□ -0.09
PRPF40B-213ENST00000551269 GPSM2P81274 684 aa14.46□□□□□ -0.09
PRPF40B-213ENST00000551269 OLFM4Q6UX06 510 aa14.46□□□□□ -0.09
PRPF40B-213ENST00000551269 ATG9AQ7Z3C6 839 aa14.46□□□□□ -0.09
PRPF40B-213ENST00000551269 SUPT20HQ8NEM7 779 aa14.46□□□□□ -0.09
PRPF40B-213ENST00000551269 RIPOR2Q9Y4F9 1068 aa14.46□□□□□ -0.09
PRPF40B-213ENST00000551269 C6orf229H3BNL8 230 aa14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 PUM3Q15397 648 aaKnown RBP14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 SLC51AQ86UW1 340 aa14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 HELBQ8NG08 1087 aaPredicted RBP14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 EYA3Q99504 573 aa14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 LRRCC1Q9C099 1032 aa14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 TAOK3Q9H2K8 898 aa14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 DCTPP1Q9H773 170 aa14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 PPP4R2Q9NY27 417 aa14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 AKAP2Q9Y2D5 859 aa14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 LEMD3Q9Y2U8 911 aa14.45□□□□□ -0.1
PRPF40B-213ENST00000551269 ZNF804BA4D1E1 1349 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 ZNF646O15015 1829 aaPredicted RBP14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 TAF5LO75529 589 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 PDE8BO95263 885 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 SLC5A1P13866 664 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 FKBP4Q02790 459 aaKnown RBP eCLIP14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 TFCP2Q12800 502 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 ATP2B3Q16720 1220 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 C7orf43Q8WVR3 580 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 BCL11AQ9H165 835 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 PODXL2Q9NZ53 605 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 MED23Q9ULK4 1368 aa14.44□□□□□ -0.1
PRPF40B-213ENST00000551269 MAST2Q6P0Q8 1798 aa14.43□□□□□ -0.1
PRPF40B-213ENST00000551269 IFIT1P09914 478 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-213ENST00000551269 YBX3P16989 372 aaKnown RBP eCLIP14.43□□□□□ -0.1
PRPF40B-213ENST00000551269 CLASRPQ8N2M8 674 aaKnown RBP14.43□□□□□ -0.1
PRPF40B-213ENST00000551269 VGLL2Q8N8G2 317 aa14.43□□□□□ -0.1
PRPF40B-213ENST00000551269 RHPN1Q8TCX5 695 aa14.43□□□□□ -0.1
PRPF40B-213ENST00000551269 PSMD1Q99460 953 aa14.43□□□□□ -0.1
PRPF40B-213ENST00000551269 SCN9AQ15858 1988 aa14.43□□□□□ -0.1
PRPF40B-213ENST00000551269 AKAP11Q9UKA4 1901 aa14.43□□□□□ -0.1
PRPF40B-213ENST00000551269 LTBP3Q9NS15 1303 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 GRIN3BO60391 1043 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 SASH1O94885 1247 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 IGHDP01880 384 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 RASSF7Q02833 373 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 UBE4AQ14139 1066 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 TNNI3KQ59H18 835 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 ARHGAP27Q6ZUM4 889 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms