RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 COPS6Q7L5N1 327 aa13.49□□□□□ -0.25
BEST3-210ENST00000551160 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
BEST3-210ENST00000551160 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
BEST3-210ENST00000551160 LRRC37AA6NMS7 1700 aa13.49□□□□□ -0.25
BEST3-210ENST00000551160 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
BEST3-210ENST00000551160 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
BEST3-210ENST00000551160 TCIRG1Q13488 830 aa13.48□□□□□ -0.25
BEST3-210ENST00000551160 PRAMEF18Q5VWM3 479 aa13.48□□□□□ -0.25
BEST3-210ENST00000551160 TBC1D16Q8TBP0 767 aa13.48□□□□□ -0.25
BEST3-210ENST00000551160 EYA3Q99504 573 aa13.48□□□□□ -0.25
BEST3-210ENST00000551160 R3HDMLQ9H3Y0 253 aa13.48□□□□□ -0.25
BEST3-210ENST00000551160 LAMB2P55268 1798 aa13.48□□□□□ -0.25
BEST3-210ENST00000551160 NFE2L2Q16236 605 aa13.47□□□□□ -0.25
BEST3-210ENST00000551160 PLEKHF1Q96S99 279 aa13.47□□□□□ -0.25
BEST3-210ENST00000551160 PAPPA2Q9BXP8 1791 aa13.47□□□□□ -0.25
BEST3-210ENST00000551160 POTEFA5A3E0 1075 aa13.46□□□□□ -0.25
BEST3-210ENST00000551160 AKAP11Q9UKA4 1901 aa13.46□□□□□ -0.25
BEST3-210ENST00000551160 ANKRD36CQ5JPF3 1778 aa13.45□□□□□ -0.26
BEST3-210ENST00000551160 FKTNO75072 461 aa13.45□□□□□ -0.26
BEST3-210ENST00000551160 UFL1O94874 794 aa13.45□□□□□ -0.26
BEST3-210ENST00000551160 NEFMP07197 916 aa13.45□□□□□ -0.26
BEST3-210ENST00000551160 TM4SF4P48230 202 aa13.45□□□□□ -0.26
BEST3-210ENST00000551160 FXR1P51114 621 aaKnown RBP eCLIP13.45□□□□□ -0.26
BEST3-210ENST00000551160 SF3B3Q15393 1217 aaKnown RBP13.45□□□□□ -0.26
BEST3-210ENST00000551160 NOM1Q5C9Z4 860 aaKnown RBP13.45□□□□□ -0.26
BEST3-210ENST00000551160 RSBN1LQ6PCB5 846 aaPredicted RBP13.45□□□□□ -0.26
BEST3-210ENST00000551160 FAM89AQ96GI7 184 aa13.45□□□□□ -0.26
BEST3-210ENST00000551160 TAF1P21675 1872 aa13.44□□□□□ -0.26
BEST3-210ENST00000551160 TTLL12Q14166 644 aaPredicted RBP13.44□□□□□ -0.26
BEST3-210ENST00000551160 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
BEST3-210ENST00000551160 AGBL3Q8NEM8 1001 aa13.44□□□□□ -0.26
BEST3-210ENST00000551160 ZC3H12CQ9C0D7 883 aaKnown RBP13.44□□□□□ -0.26
BEST3-210ENST00000551160 MYOZ2Q9NPC6 264 aa13.44□□□□□ -0.26
BEST3-210ENST00000551160 ZNF609O15014 1411 aa13.44□□□□□ -0.26
BEST3-210ENST00000551160 POLR2AP24928 1970 aaKnown RBP13.43□□□□□ -0.26
BEST3-210ENST00000551160 PITPNM2Q9BZ72 1349 aa13.43□□□□□ -0.26
BEST3-210ENST00000551160 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
BEST3-210ENST00000551160 G3V3G9 751 aa13.43□□□□□ -0.26
BEST3-210ENST00000551160 USP17L8P0C7I0 530 aa13.43□□□□□ -0.26
BEST3-210ENST00000551160 RPS8P62241 208 aaKnown RBP13.43□□□□□ -0.26
BEST3-210ENST00000551160 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
BEST3-210ENST00000551160 GMLQ99445 158 aa13.43□□□□□ -0.26
BEST3-210ENST00000551160 SCN9AQ15858 1988 aa13.43□□□□□ -0.26
BEST3-210ENST00000551160 KRT24Q2M2I5 525 aa13.42□□□□□ -0.26
BEST3-210ENST00000551160 NBPF9Q3BBW0 867 aa13.42□□□□□ -0.26
BEST3-210ENST00000551160 ISCA1Q9BUE6 129 aa13.42□□□□□ -0.26
BEST3-210ENST00000551160 CFHR5Q9BXR6 569 aa13.42□□□□□ -0.26
BEST3-210ENST00000551160 SEC31BQ9NQW1 1179 aa13.42□□□□□ -0.26
BEST3-210ENST00000551160 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
BEST3-210ENST00000551160 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
BEST3-210ENST00000551160 GGA1Q9UJY5 639 aa13.42□□□□□ -0.26
BEST3-210ENST00000551160 TRIM17Q9Y577 477 aa13.42□□□□□ -0.26
BEST3-210ENST00000551160 MKI67P46013 3256 aaKnown RBP13.42□□□□□ -0.26
BEST3-210ENST00000551160 IRS4O14654 1257 aaPredicted RBP13.41□□□□□ -0.26
BEST3-210ENST00000551160 PTPN12Q05209 780 aaKnown RBP13.41□□□□□ -0.26
BEST3-210ENST00000551160 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
BEST3-210ENST00000551160 ANKIB1Q9P2G1 1089 aa13.41□□□□□ -0.26
BEST3-210ENST00000551160 HTTP42858 3142 aa13.4□□□□□ -0.26
BEST3-210ENST00000551160 DDX60Q8IY21 1712 aaKnown RBP13.4□□□□□ -0.26
BEST3-210ENST00000551160 PRKG1Q13976 671 aa13.4□□□□□ -0.26
BEST3-210ENST00000551160 OTOP1Q7RTM1 612 aa13.4□□□□□ -0.26
BEST3-210ENST00000551160 PLBD2Q8NHP8 589 aa13.4□□□□□ -0.26
BEST3-210ENST00000551160 CCER1Q8TC90 406 aaPredicted RBP13.4□□□□□ -0.26
BEST3-210ENST00000551160 MXD3Q9BW11 206 aa13.4□□□□□ -0.26
BEST3-210ENST00000551160 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
BEST3-210ENST00000551160 USP17L3A6NCW0 530 aa13.38□□□□□ -0.27
BEST3-210ENST00000551160 USP17L4A6NCW7 530 aa13.38□□□□□ -0.27
BEST3-210ENST00000551160 WTIPA6NIX2 430 aaPredicted RBP13.38□□□□□ -0.27
BEST3-210ENST00000551160 SASH1O94885 1247 aa13.38□□□□□ -0.27
BEST3-210ENST00000551160 EN2P19622 333 aaPredicted RBP13.38□□□□□ -0.27
BEST3-210ENST00000551160 NF2P35240 595 aa13.38□□□□□ -0.27
BEST3-210ENST00000551160 SPRYD7Q5W111 196 aa13.38□□□□□ -0.27
BEST3-210ENST00000551160 USP17L1Q7RTZ2 530 aa13.38□□□□□ -0.27
BEST3-210ENST00000551160 FZD1Q9UP38 647 aa13.38□□□□□ -0.27
BEST3-210ENST00000551160 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
BEST3-210ENST00000551160 WNT10BO00744 389 aa13.37□□□□□ -0.27
BEST3-210ENST00000551160 RIPK4P57078 832 aa13.37□□□□□ -0.27
BEST3-210ENST00000551160 INTS3Q68E01 1043 aaKnown RBP13.37□□□□□ -0.27
BEST3-210ENST00000551160 ANKRD13DQ6ZTN6 518 aa13.37□□□□□ -0.27
BEST3-210ENST00000551160 CCDC85AQ96PX6 553 aaPredicted RBP13.37□□□□□ -0.27
BEST3-210ENST00000551160 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
BEST3-210ENST00000551160 KIAA0100Q14667 2235 aaKnown RBP13.36□□□□□ -0.27
BEST3-210ENST00000551160 ARMC9Q7Z3E5 817 aa13.36□□□□□ -0.27
BEST3-210ENST00000551160 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
BEST3-210ENST00000551160 ARMC5Q96C12 935 aa13.36□□□□□ -0.27
BEST3-210ENST00000551160 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
BEST3-210ENST00000551160 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
BEST3-210ENST00000551160 TRIOBPQ9H2D6 2365 aa13.36□□□□□ -0.27
BEST3-210ENST00000551160 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
BEST3-210ENST00000551160 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
BEST3-210ENST00000551160 CAP1Q01518 475 aa13.35□□□□□ -0.27
BEST3-210ENST00000551160 DACT2Q5SW24 774 aa13.35□□□□□ -0.27
BEST3-210ENST00000551160 LDLRAD1Q5T700 205 aa13.35□□□□□ -0.27
BEST3-210ENST00000551160 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
BEST3-210ENST00000551160 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
BEST3-210ENST00000551160 CD99L2Q8TCZ2 262 aa13.35□□□□□ -0.27
BEST3-210ENST00000551160 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
BEST3-210ENST00000551160 ANGEL1Q9UNK9 670 aaKnown RBP13.35□□□□□ -0.27
BEST3-210ENST00000551160 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
BEST3-210ENST00000551160 XDHP47989 1333 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms