RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 TAF1P21675 1872 aa19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 IPO8O15397 1037 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 DDNO94850 711 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 IFIT5Q13325 482 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 LMBR1LQ6UX01 489 aa19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 TBC1D16Q8TBP0 767 aa19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 SUCLG2Q96I99 432 aa19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 ANKIB1Q9P2G1 1089 aa19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 POLLQ9UGP5 575 aa19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 GGA1Q9UJY5 639 aa19.43■□□□□ 0.7
PRPF40B-211ENST00000551063 LTBP1Q14766 1721 aa19.42■□□□□ 0.7
PRPF40B-211ENST00000551063 C6orf229H3BNL8 230 aa19.42■□□□□ 0.7
PRPF40B-211ENST00000551063 GPC2Q8N158 579 aa19.42■□□□□ 0.7
PRPF40B-211ENST00000551063 USP44Q9H0E7 712 aa19.42■□□□□ 0.7
PRPF40B-211ENST00000551063 ZNRF3Q9ULT6 936 aa19.42■□□□□ 0.7
PRPF40B-211ENST00000551063 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
PRPF40B-211ENST00000551063 BCAR3O75815 825 aa19.41■□□□□ 0.7
PRPF40B-211ENST00000551063 UFL1O94874 794 aa19.41■□□□□ 0.7
PRPF40B-211ENST00000551063 ATP2B4P23634 1241 aa19.41■□□□□ 0.7
PRPF40B-211ENST00000551063 WASHC4Q2M389 1173 aa19.41■□□□□ 0.7
PRPF40B-211ENST00000551063 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-211ENST00000551063 JMYQ8N9B5 988 aa19.41■□□□□ 0.7
PRPF40B-211ENST00000551063 KAZALD1Q96I82 304 aa19.41■□□□□ 0.7
PRPF40B-211ENST00000551063 MPHOSPH8Q99549 860 aa19.41■□□□□ 0.7
PRPF40B-211ENST00000551063 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
PRPF40B-211ENST00000551063 IQCA1LA6NCM1 817 aa19.4■□□□□ 0.7
PRPF40B-211ENST00000551063 CCDC57Q2TAC2 916 aa19.4■□□□□ 0.7
PRPF40B-211ENST00000551063 TRIM27P14373 513 aa19.39■□□□□ 0.69
PRPF40B-211ENST00000551063 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
PRPF40B-211ENST00000551063 ANKRD2Q9GZV1 360 aa19.39■□□□□ 0.69
PRPF40B-211ENST00000551063 BICC1Q9H694 974 aaKnown RBP19.39■□□□□ 0.69
PRPF40B-211ENST00000551063 ZKSCAN2Q63HK3 967 aa19.38■□□□□ 0.69
PRPF40B-211ENST00000551063 INTS3Q68E01 1043 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-211ENST00000551063 CHADLQ6NUI6 762 aa19.38■□□□□ 0.69
PRPF40B-211ENST00000551063 ZC3H12CQ9C0D7 883 aaKnown RBP19.38■□□□□ 0.69
PRPF40B-211ENST00000551063 MED23Q9ULK4 1368 aa19.37■□□□□ 0.69
PRPF40B-211ENST00000551063 TAF7LQ5H9L4 462 aa19.37■□□□□ 0.69
PRPF40B-211ENST00000551063 ANKRD44Q8N8A2 993 aa19.37■□□□□ 0.69
PRPF40B-211ENST00000551063 FRAT1Q92837 279 aaPredicted RBP19.37■□□□□ 0.69
PRPF40B-211ENST00000551063 HDAC5Q9UQL6 1122 aa19.37■□□□□ 0.69
PRPF40B-211ENST00000551063 LEMD3Q9Y2U8 911 aa19.37■□□□□ 0.69
PRPF40B-211ENST00000551063 RIMBP2O15034 1052 aa19.36■□□□□ 0.69
PRPF40B-211ENST00000551063 UBTFL1P0CB47 393 aaPredicted RBP19.36■□□□□ 0.69
PRPF40B-211ENST00000551063 CXCL9Q07325 125 aa19.36■□□□□ 0.69
PRPF40B-211ENST00000551063 CIAPIN1Q6FI81 312 aa19.36■□□□□ 0.69
PRPF40B-211ENST00000551063 GPR101Q96P66 508 aaPredicted RBP19.36■□□□□ 0.69
PRPF40B-211ENST00000551063 HACL1Q9UJ83 578 aa19.36■□□□□ 0.69
PRPF40B-211ENST00000551063 GJA3Q9Y6H8 435 aa19.36■□□□□ 0.69
PRPF40B-211ENST00000551063 YDJCA8MPS7 323 aa19.35■□□□□ 0.69
PRPF40B-211ENST00000551063 ECE2O60344 883 aa19.35■□□□□ 0.69
PRPF40B-211ENST00000551063 CHRNDQ07001 517 aa19.35■□□□□ 0.69
PRPF40B-211ENST00000551063 DBNDD1Q9H9R9 158 aa19.35■□□□□ 0.69
PRPF40B-211ENST00000551063 TNIP1Q15025 636 aa19.34■□□□□ 0.69
PRPF40B-211ENST00000551063 LDHAL6AQ6ZMR3 332 aa19.34■□□□□ 0.69
PRPF40B-211ENST00000551063 TAF1DQ9H5J8 278 aaPredicted RBP19.34■□□□□ 0.69
PRPF40B-211ENST00000551063 ZNF804BA4D1E1 1349 aa19.33■□□□□ 0.69
PRPF40B-211ENST00000551063 LMOD1P29536 600 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-211ENST00000551063 SCNN1DP51172 638 aa19.33■□□□□ 0.68
PRPF40B-211ENST00000551063 LDHDQ86WU2 507 aa19.33■□□□□ 0.68
PRPF40B-211ENST00000551063 ZNF594Q96JF6 807 aaPredicted RBP19.33■□□□□ 0.68
PRPF40B-211ENST00000551063 CNNM1Q9NRU3 951 aa19.33■□□□□ 0.68
PRPF40B-211ENST00000551063 RAD17O75943 681 aa19.32■□□□□ 0.68
PRPF40B-211ENST00000551063 GNAI3P08754 354 aa19.32■□□□□ 0.68
PRPF40B-211ENST00000551063 EPHX2P34913 555 aa19.32■□□□□ 0.68
PRPF40B-211ENST00000551063 DOK7Q18PE1 504 aa19.32■□□□□ 0.68
PRPF40B-211ENST00000551063 MEIS3Q99687 375 aa19.32■□□□□ 0.68
PRPF40B-211ENST00000551063 SCN4AP35499 1836 aa19.32■□□□□ 0.68
PRPF40B-211ENST00000551063 G3V3G9 751 aa19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 POTEIP0CG38 1075 aa19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 POTEJP0CG39 1038 aa19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 KCNJ4P48050 445 aa19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 DCAF8Q5TAQ9 597 aa19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 PODNQ7Z5L7 613 aa19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 PNMA8AQ86V59 439 aaPredicted RBP19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 CLUAP1Q96AJ1 413 aa19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 CREBZFQ9NS37 354 aa19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 TNNQ9UQP3 1299 aa19.31■□□□□ 0.68
PRPF40B-211ENST00000551063 GMPSP49915 693 aaPredicted RBP19.3■□□□□ 0.68
PRPF40B-211ENST00000551063 C15orf52Q6ZUT6 534 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-211ENST00000551063 FTSJ3Q8IY81 847 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-211ENST00000551063 GPRC5DQ9NZD1 345 aa19.3■□□□□ 0.68
PRPF40B-211ENST00000551063 LRRFIP2Q9Y608 721 aaKnown RBP19.3■□□□□ 0.68
PRPF40B-211ENST00000551063 SPEF2Q9C093 1822 aa19.3■□□□□ 0.68
PRPF40B-211ENST00000551063 ZNF609O15014 1411 aa19.29■□□□□ 0.68
PRPF40B-211ENST00000551063 PSMD14O00487 310 aa19.29■□□□□ 0.68
PRPF40B-211ENST00000551063 RPS12P25398 132 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-211ENST00000551063 EAPPQ56P03 285 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-211ENST00000551063 TMEM57Q8N5G2 664 aa19.29■□□□□ 0.68
PRPF40B-211ENST00000551063 COA1Q9GZY4 146 aa19.29■□□□□ 0.68
PRPF40B-211ENST00000551063 MROH5Q6ZUA9 1318 aa19.28■□□□□ 0.68
PRPF40B-211ENST00000551063 WTIPA6NIX2 430 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-211ENST00000551063 TAF5LO75529 589 aa19.28■□□□□ 0.68
PRPF40B-211ENST00000551063 RFX5P48382 616 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-211ENST00000551063 DZIP1LQ8IYY4 767 aaKnown RBP19.28■□□□□ 0.68
PRPF40B-211ENST00000551063 DPF2Q92785 391 aa19.28■□□□□ 0.68
PRPF40B-211ENST00000551063 CLEC11AQ9Y240 323 aa19.28■□□□□ 0.68
PRPF40B-211ENST00000551063 RIPOR2Q9Y4F9 1068 aa19.28■□□□□ 0.68
PRPF40B-211ENST00000551063 IRS2Q9Y4H2 1338 aa19.27■□□□□ 0.68
PRPF40B-211ENST00000551063 EPS15P42566 896 aa19.27■□□□□ 0.68
PRPF40B-211ENST00000551063 USP50Q70EL3 339 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms