RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 URB2Q14146 1524 aaKnown RBP14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 HEATR3Q7Z4Q2 680 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 PSMD1Q99460 953 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 TSHZ3Q63HK5 1081 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 TRMT1LQ7Z2T5 733 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 ZNF804AQ7Z570 1209 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 GDPD2Q9HCC8 539 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 CHPF2Q9P2E5 772 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 KRT28Q7Z3Y7 464 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 ANKRD24Q8TF21 1146 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 CTAGE9A4FU28 777 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 MRPS9P82933 396 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 UVSSAQ2YD98 709 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 ZSCAN22P10073 491 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 ZNF622Q969S3 477 aaKnown RBP eCLIP14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 MMRN2Q9H8L6 949 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 RTL9Q8NET4 1388 aa14.25□□□□□ -0.13
RAB3IP-212ENST00000550536 ADGRF5Q8IZF2 1346 aa14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 ANKS4BQ8N8V4 417 aa14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 TBC1D32Q96NH3 1257 aa14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 PANK2Q9BZ23 570 aa14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 IQCGQ9H095 443 aaKnown RBP14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 DNMT1P26358 1616 aaKnown RBP14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 SNRKQ9NRH2 765 aa14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 KRT13P13646 458 aa14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 CYLC1P35663 651 aaPredicted RBP14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 STMN4Q9H169 189 aaPredicted RBP14.24□□□□□ -0.13
RAB3IP-212ENST00000550536 GNAQP50148 359 aa14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 GNG11P61952 73 aa14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 MCMDC2Q4G0Z9 681 aa14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 OGFOD1Q8N543 542 aa14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 DYNC1I1O14576 645 aa14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 CADPS2Q86UW7 1296 aa14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 NSRP1Q9H0G5 558 aaKnown RBP14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 ALG1Q9BT22 464 aa14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 ZNF518AQ6AHZ1 1483 aa14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 HDAC1Q13547 482 aaPredicted RBP14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 ANO6Q4KMQ2 910 aa14.23□□□□□ -0.13
RAB3IP-212ENST00000550536 PLXNC1O60486 1568 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 KLF18A0A0U1RQI7 1052 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 AKR1B10O60218 316 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 ATP6V1AP38606 617 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 PHACTR2O75167 634 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 GNAT2P19087 354 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 AFMP43652 599 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 IMPG2Q9BZV3 1241 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 SLC4A4Q9Y6R1 1079 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 GRM8O00222 908 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 NYXQ9GZU5 481 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 KLHL40Q2TBA0 621 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 RRAGBQ5VZM2 374 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 FAM83GA6ND36 823 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 SPDYE3A6NKU9 549 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 PRIMPOLQ96LW4 560 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 WDR7Q9Y4E6 1490 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 KIAA0556O60303 1618 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 ACEP12821 1306 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 SPAG5Q96R06 1193 aa14.22□□□□□ -0.13
RAB3IP-212ENST00000550536 RTL1A6NKG5 1358 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 HDAC9Q9UKV0 1011 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 PSMA7O14818 248 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 CYP7A1P22680 504 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 RAB11FIP4Q86YS3 637 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 RBM27Q9P2N5 1060 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 NAPAP54920 295 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 C6orf50Q9HD87 102 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 BICRAQ9NZM4 1560 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 B4DLN1 442 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 MRPL12P52815 198 aaKnown RBP14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 LRSAM1Q6UWE0 723 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 ARHGAP45Q92619 1136 aa14.21□□□□□ -0.13
RAB3IP-212ENST00000550536 ZFYVE9O95405 1425 aa14.21□□□□□ -0.14
RAB3IP-212ENST00000550536 KIF4AO95239 1232 aa14.21□□□□□ -0.14
RAB3IP-212ENST00000550536 CALML3P27482 149 aa14.21□□□□□ -0.14
RAB3IP-212ENST00000550536 CA8P35219 290 aa14.21□□□□□ -0.14
RAB3IP-212ENST00000550536 ARFGAP3Q9NP61 516 aa14.21□□□□□ -0.14
RAB3IP-212ENST00000550536 TNRQ92752 1358 aa14.21□□□□□ -0.14
RAB3IP-212ENST00000550536 BICDL2A1A5D9 508 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 PAG1Q9NWQ8 432 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 Q6ZUG5 572 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 DDX23Q9BUQ8 820 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 SDSP20132 328 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 NUP160Q12769 1436 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 CALM1P0DP23 149 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 CALM2P0DP24 149 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 CALM3P0DP25 149 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 IDI1Q13907 227 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 PRDM10Q9NQV6 1147 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 CNPY2Q9Y2B0 182 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 PLS1Q14651 629 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 NAA16Q6N069 864 aaPredicted RBP14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 PLCG2P16885 1265 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 ATP2B3Q16720 1220 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 ZNF354CQ86Y25 554 aa14.2□□□□□ -0.14
RAB3IP-212ENST00000550536 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms