RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 DOK7Q18PE1 504 aa28.02■■■□□ 2.08
SMARCC2-210ENST00000550519 CCDC30Q5VVM6 783 aa28.02■■■□□ 2.08
SMARCC2-210ENST00000550519 SAMD7Q7Z3H4 446 aa28.02■■■□□ 2.08
SMARCC2-210ENST00000550519 BEGAINQ9BUH8 593 aa28.02■■■□□ 2.08
SMARCC2-210ENST00000550519 METTL22Q9BUU2 404 aaPredicted RBP28.02■■■□□ 2.08
SMARCC2-210ENST00000550519 CHMP4AQ9BY43 222 aa28.02■■■□□ 2.08
SMARCC2-210ENST00000550519 PDE8AO60658 829 aa28.01■■■□□ 2.07
SMARCC2-210ENST00000550519 AOC2O75106 756 aa28.01■■■□□ 2.07
SMARCC2-210ENST00000550519 CCDC152Q4G0S7 254 aa28.01■■■□□ 2.07
SMARCC2-210ENST00000550519 CWC25Q9NXE8 425 aaPredicted RBP28.01■■■□□ 2.07
SMARCC2-210ENST00000550519 DDX58O95786 925 aaKnown RBP28■■■□□ 2.07
SMARCC2-210ENST00000550519 USP48Q86UV5 1035 aa28■■■□□ 2.07
SMARCC2-210ENST00000550519 ZC3H12CQ9C0D7 883 aaKnown RBP28■■■□□ 2.07
SMARCC2-210ENST00000550519 ZNF408Q9H9D4 720 aa28■■■□□ 2.07
SMARCC2-210ENST00000550519 EGFRP00533 1210 aa27.99■■■□□ 2.07
SMARCC2-210ENST00000550519 TBC1D10BQ4KMP7 808 aaPredicted RBP27.99■■■□□ 2.07
SMARCC2-210ENST00000550519 TSPYL6Q8N831 410 aa27.99■■■□□ 2.07
SMARCC2-210ENST00000550519 JARID2Q92833 1246 aaPredicted RBP27.98■■■□□ 2.07
SMARCC2-210ENST00000550519 UFL1O94874 794 aa27.97■■■□□ 2.07
SMARCC2-210ENST00000550519 VIL1P09327 827 aaKnown RBP27.97■■■□□ 2.07
SMARCC2-210ENST00000550519 ANKIB1Q9P2G1 1089 aa27.97■■■□□ 2.07
SMARCC2-210ENST00000550519 GGA1Q9UJY5 639 aa27.97■■■□□ 2.07
SMARCC2-210ENST00000550519 DLK2Q6UY11 383 aa27.96■■■□□ 2.07
SMARCC2-210ENST00000550519 MAP3K2Q9Y2U5 619 aa27.96■■■□□ 2.07
SMARCC2-210ENST00000550519 KRT26Q7Z3Y9 468 aa27.95■■■□□ 2.06
SMARCC2-210ENST00000550519 CCDC85AQ96PX6 553 aaPredicted RBP27.95■■■□□ 2.06
SMARCC2-210ENST00000550519 KSR2Q6VAB6 950 aa27.94■■■□□ 2.06
SMARCC2-210ENST00000550519 PI4KAP2A4QPH2 592 aa27.93■■■□□ 2.06
SMARCC2-210ENST00000550519 IGKV5-2P06315 115 aa27.93■■■□□ 2.06
SMARCC2-210ENST00000550519 BRPF1P55201 1214 aaPredicted RBP27.93■■■□□ 2.06
SMARCC2-210ENST00000550519 CCDC184Q52MB2 194 aa27.93■■■□□ 2.06
SMARCC2-210ENST00000550519 RBM26Q5T8P6 1007 aaKnown RBP27.93■■■□□ 2.06
SMARCC2-210ENST00000550519 ANKRD18AQ8IVF6 992 aa27.93■■■□□ 2.06
SMARCC2-210ENST00000550519 PI4KAP1Q8N8J0 262 aa27.93■■■□□ 2.06
SMARCC2-210ENST00000550519 TSR2Q969E8 191 aaKnown RBP27.93■■■□□ 2.06
SMARCC2-210ENST00000550519 G3V3G9 751 aa27.92■■■□□ 2.06
SMARCC2-210ENST00000550519 CA12O43570 354 aa27.92■■■□□ 2.06
SMARCC2-210ENST00000550519 CCDC27Q2M243 656 aa27.92■■■□□ 2.06
SMARCC2-210ENST00000550519 DCAF8Q5TAQ9 597 aa27.92■■■□□ 2.06
SMARCC2-210ENST00000550519 DCPSQ96C86 337 aaKnown RBP27.92■■■□□ 2.06
SMARCC2-210ENST00000550519 ABHD8Q96I13 439 aa27.92■■■□□ 2.06
SMARCC2-210ENST00000550519 XDHP47989 1333 aa27.92■■■□□ 2.06
SMARCC2-210ENST00000550519 CTSWP56202 376 aa27.91■■■□□ 2.06
SMARCC2-210ENST00000550519 HUNKP57058 714 aa27.91■■■□□ 2.06
SMARCC2-210ENST00000550519 KIF4BQ2VIQ3 1234 aa27.91■■■□□ 2.06
SMARCC2-210ENST00000550519 TSKSQ9UJT2 592 aa27.91■■■□□ 2.06
SMARCC2-210ENST00000550519 SCN9AQ15858 1988 aa27.91■■■□□ 2.06
SMARCC2-210ENST00000550519 ZNF609O15014 1411 aa27.9■■■□□ 2.06
SMARCC2-210ENST00000550519 ADM5C9JUS6 153 aa27.89■■■□□ 2.06
SMARCC2-210ENST00000550519 ATP2B4P23634 1241 aa27.89■■■□□ 2.06
SMARCC2-210ENST00000550519 ZNF280AP59817 542 aaPredicted RBP27.89■■■□□ 2.06
SMARCC2-210ENST00000550519 NOGQ13253 232 aa27.89■■■□□ 2.06
SMARCC2-210ENST00000550519 WWC1Q8IX03 1113 aa27.89■■■□□ 2.06
SMARCC2-210ENST00000550519 AGBL3Q8NEM8 1001 aa27.89■■■□□ 2.06
SMARCC2-210ENST00000550519 TTLL11Q8NHH1 800 aa27.89■■■□□ 2.06
SMARCC2-210ENST00000550519 STK31Q9BXU1 1019 aa27.89■■■□□ 2.06
SMARCC2-210ENST00000550519 RSBN1LQ6PCB5 846 aaPredicted RBP27.88■■■□□ 2.05
SMARCC2-210ENST00000550519 CDC5LQ99459 802 aaKnown RBP27.88■■■□□ 2.05
SMARCC2-210ENST00000550519 GBA2Q9HCG7 927 aaPredicted RBP27.88■■■□□ 2.05
SMARCC2-210ENST00000550519 NEXNQ0ZGT2 675 aa27.87■■■□□ 2.05
SMARCC2-210ENST00000550519 TWISTNBQ3B726 338 aaPredicted RBP27.87■■■□□ 2.05
SMARCC2-210ENST00000550519 C2orf69Q8N8R5 385 aa27.87■■■□□ 2.05
SMARCC2-210ENST00000550519 ZIC5Q96T25 663 aa27.87■■■□□ 2.05
SMARCC2-210ENST00000550519 GMLQ99445 158 aa27.87■■■□□ 2.05
SMARCC2-210ENST00000550519 GGA3Q9NZ52 723 aa27.87■■■□□ 2.05
SMARCC2-210ENST00000550519 CWF19L2Q2TBE0 894 aaKnown RBP27.86■■■□□ 2.05
SMARCC2-210ENST00000550519 PODNQ7Z5L7 613 aa27.86■■■□□ 2.05
SMARCC2-210ENST00000550519 BSDC1Q9NW68 430 aaPredicted RBP27.86■■■□□ 2.05
SMARCC2-210ENST00000550519 ASTN2O75129 1339 aaPredicted RBP27.86■■■□□ 2.05
SMARCC2-210ENST00000550519 NEURL1BA8MQ27 555 aa27.85■■■□□ 2.05
SMARCC2-210ENST00000550519 RGMBQ6NW40 437 aa27.85■■■□□ 2.05
SMARCC2-210ENST00000550519 G2E3Q7L622 706 aa27.85■■■□□ 2.05
SMARCC2-210ENST00000550519 SULF1Q8IWU6 871 aa27.85■■■□□ 2.05
SMARCC2-210ENST00000550519 GREM2Q9H772 168 aa27.85■■■□□ 2.05
SMARCC2-210ENST00000550519 IL16Q14005 1332 aa27.85■■■□□ 2.05
SMARCC2-210ENST00000550519 WTIPA6NIX2 430 aaPredicted RBP27.84■■■□□ 2.05
SMARCC2-210ENST00000550519 FAM155AB1AL88 458 aaPredicted RBP27.84■■■□□ 2.05
SMARCC2-210ENST00000550519 H7C1W4 665 aa27.84■■■□□ 2.05
SMARCC2-210ENST00000550519 NCBP3Q53F19 620 aaKnown RBP27.84■■■□□ 2.05
SMARCC2-210ENST00000550519 MINPP1Q9UNW1 487 aa27.84■■■□□ 2.05
SMARCC2-210ENST00000550519 POLR2AP24928 1970 aaKnown RBP27.83■■■□□ 2.05
SMARCC2-210ENST00000550519 SLC4A2P04920 1241 aa27.83■■■□□ 2.05
SMARCC2-210ENST00000550519 USP17L3A6NCW0 530 aa27.82■■■□□ 2.04
SMARCC2-210ENST00000550519 USP17L4A6NCW7 530 aa27.82■■■□□ 2.04
SMARCC2-210ENST00000550519 SCARF1Q14162 830 aa27.82■■■□□ 2.04
SMARCC2-210ENST00000550519 USP17L1Q7RTZ2 530 aa27.82■■■□□ 2.04
SMARCC2-210ENST00000550519 USP17L8P0C7I0 530 aa27.81■■■□□ 2.04
SMARCC2-210ENST00000550519 CCDC102AQ96A19 550 aa27.81■■■□□ 2.04
SMARCC2-210ENST00000550519 MED23Q9ULK4 1368 aa27.81■■■□□ 2.04
SMARCC2-210ENST00000550519 ANGEL2Q5VTE6 544 aaKnown RBP27.8■■■□□ 2.04
SMARCC2-210ENST00000550519 UBE3BQ7Z3V4 1068 aa27.8■■■□□ 2.04
SMARCC2-210ENST00000550519 CDCA5Q96FF9 252 aa27.8■■■□□ 2.04
SMARCC2-210ENST00000550519 MYOZ2Q9NPC6 264 aa27.8■■■□□ 2.04
SMARCC2-210ENST00000550519 CCT4P50991 539 aaKnown RBP27.79■■■□□ 2.04
SMARCC2-210ENST00000550519 FLIIQ13045 1269 aa27.79■■■□□ 2.04
SMARCC2-210ENST00000550519 GCKRQ14397 625 aa27.79■■■□□ 2.04
SMARCC2-210ENST00000550519 PLA2G12BQ9BX93 195 aa27.79■■■□□ 2.04
SMARCC2-210ENST00000550519 PSME4Q14997 1843 aa27.78■■■□□ 2.04
SMARCC2-210ENST00000550519 ZNF157P51786 506 aaPredicted RBP27.78■■■□□ 2.04
SMARCC2-210ENST00000550519 PITPNM2Q9BZ72 1349 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms