RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ARHGAP45Q92619 1136 aa14.17□□□□□ -0.14
RAB5B-208ENST00000550283 PUS3Q9BZE2 481 aaKnown RBP14.17□□□□□ -0.14
RAB5B-208ENST00000550283 KCNQ5Q9NR82 932 aa14.17□□□□□ -0.14
RAB5B-208ENST00000550283 GLTPD2A6NH11 291 aa14.16□□□□□ -0.14
RAB5B-208ENST00000550283 YDJCA8MPS7 323 aa14.16□□□□□ -0.14
RAB5B-208ENST00000550283 FZD9O00144 591 aa14.16□□□□□ -0.14
RAB5B-208ENST00000550283 RIMBP2O15034 1052 aa14.16□□□□□ -0.14
RAB5B-208ENST00000550283 PPIP5K2O43314 1243 aa14.16□□□□□ -0.14
RAB5B-208ENST00000550283 RABL6Q3YEC7 729 aaPredicted RBP14.16□□□□□ -0.14
RAB5B-208ENST00000550283 HELBQ8NG08 1087 aaPredicted RBP14.16□□□□□ -0.14
RAB5B-208ENST00000550283 KLHDC4Q8TBB5 520 aa14.16□□□□□ -0.14
RAB5B-208ENST00000550283 RRAGCQ9HB90 399 aa14.16□□□□□ -0.14
RAB5B-208ENST00000550283 GPBP1L1Q9HC44 474 aaPredicted RBP14.16□□□□□ -0.14
RAB5B-208ENST00000550283 CHMP3Q9Y3E7 222 aa14.16□□□□□ -0.14
RAB5B-208ENST00000550283 PLIN1O60240 522 aa14.15□□□□□ -0.14
RAB5B-208ENST00000550283 HSP90B1P14625 803 aaKnown RBP14.15□□□□□ -0.14
RAB5B-208ENST00000550283 CCT4P50991 539 aaKnown RBP14.15□□□□□ -0.14
RAB5B-208ENST00000550283 KIAA2012Q0VF49 1180 aa14.15□□□□□ -0.14
RAB5B-208ENST00000550283 TXNRD3Q86VQ6 643 aa14.15□□□□□ -0.14
RAB5B-208ENST00000550283 LARGE2Q8N3Y3 721 aa14.15□□□□□ -0.14
RAB5B-208ENST00000550283 BSDC1Q9NW68 430 aaPredicted RBP14.15□□□□□ -0.14
RAB5B-208ENST00000550283 PODXL2Q9NZ53 605 aa14.15□□□□□ -0.14
RAB5B-208ENST00000550283 A0A1B0GUL6 1792 aa14.14□□□□□ -0.15
RAB5B-208ENST00000550283 RFX5P48382 616 aaPredicted RBP14.14□□□□□ -0.15
RAB5B-208ENST00000550283 DOK7Q18PE1 504 aa14.14□□□□□ -0.15
RAB5B-208ENST00000550283 COL13A1Q5TAT6 717 aaPredicted RBP14.14□□□□□ -0.15
RAB5B-208ENST00000550283 TMC4Q7Z404 712 aa14.14□□□□□ -0.15
RAB5B-208ENST00000550283 PANK1Q8TE04 598 aa14.14□□□□□ -0.15
RAB5B-208ENST00000550283 CDC5LQ99459 802 aaKnown RBP14.14□□□□□ -0.15
RAB5B-208ENST00000550283 LRRFIP2Q9Y608 721 aaKnown RBP14.14□□□□□ -0.15
RAB5B-208ENST00000550283 IRS2Q9Y4H2 1338 aa14.14□□□□□ -0.15
RAB5B-208ENST00000550283 ANKRD18BA2A2Z9 1011 aa14.13□□□□□ -0.15
RAB5B-208ENST00000550283 C6orf229H3BNL8 230 aa14.13□□□□□ -0.15
RAB5B-208ENST00000550283 TAF5LO75529 589 aa14.13□□□□□ -0.15
RAB5B-208ENST00000550283 UFL1O94874 794 aa14.13□□□□□ -0.15
RAB5B-208ENST00000550283 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
RAB5B-208ENST00000550283 POTEJP0CG39 1038 aa14.13□□□□□ -0.15
RAB5B-208ENST00000550283 LRRC24Q50LG9 513 aa14.13□□□□□ -0.15
RAB5B-208ENST00000550283 ZKSCAN2Q63HK3 967 aa14.13□□□□□ -0.15
RAB5B-208ENST00000550283 DBNDD1Q9H9R9 158 aa14.13□□□□□ -0.15
RAB5B-208ENST00000550283 ZC3H4Q9UPT8 1303 aaKnown RBP14.13□□□□□ -0.15
RAB5B-208ENST00000550283 WDR90Q96KV7 1748 aa14.12□□□□□ -0.15
RAB5B-208ENST00000550283 SHTN1A0MZ66 631 aa14.12□□□□□ -0.15
RAB5B-208ENST00000550283 CHRNDQ07001 517 aa14.12□□□□□ -0.15
RAB5B-208ENST00000550283 CXCL9Q07325 125 aa14.12□□□□□ -0.15
RAB5B-208ENST00000550283 IFIT5Q13325 482 aaKnown RBP14.12□□□□□ -0.15
RAB5B-208ENST00000550283 C20orf194Q5TEA3 1177 aa14.12□□□□□ -0.15
RAB5B-208ENST00000550283 ANKIB1Q9P2G1 1089 aa14.12□□□□□ -0.15
RAB5B-208ENST00000550283 RCAN3Q9UKA8 241 aa14.12□□□□□ -0.15
RAB5B-208ENST00000550283 SCN9AQ15858 1988 aa14.12□□□□□ -0.15
RAB5B-208ENST00000550283 RAD17O75943 681 aa14.11□□□□□ -0.15
RAB5B-208ENST00000550283 UBTFL1P0CB47 393 aaPredicted RBP14.11□□□□□ -0.15
RAB5B-208ENST00000550283 IGHMBP2P38935 993 aaKnown RBP14.11□□□□□ -0.15
RAB5B-208ENST00000550283 WASHC4Q2M389 1173 aa14.11□□□□□ -0.15
RAB5B-208ENST00000550283 GRIPAP1Q4V328 841 aa14.11□□□□□ -0.15
RAB5B-208ENST00000550283 NIM1KQ8IY84 436 aa14.11□□□□□ -0.15
RAB5B-208ENST00000550283 GGA1Q9UJY5 639 aa14.11□□□□□ -0.15
RAB5B-208ENST00000550283 XDHP47989 1333 aa14.11□□□□□ -0.15
RAB5B-208ENST00000550283 IPO8O15397 1037 aaKnown RBP14.1□□□□□ -0.15
RAB5B-208ENST00000550283 CCDC57Q2TAC2 916 aa14.1□□□□□ -0.15
RAB5B-208ENST00000550283 SUPT20HQ8NEM7 779 aa14.1□□□□□ -0.15
RAB5B-208ENST00000550283 C1orf115Q9H7X2 142 aa14.1□□□□□ -0.15
RAB5B-208ENST00000550283 ZNRF3Q9ULT6 936 aa14.1□□□□□ -0.15
RAB5B-208ENST00000550283 PA2G4Q9UQ80 394 aaKnown RBP14.1□□□□□ -0.15
RAB5B-208ENST00000550283 RIPOR2Q9Y4F9 1068 aa14.1□□□□□ -0.15
RAB5B-208ENST00000550283 GJA3Q9Y6H8 435 aa14.1□□□□□ -0.15
RAB5B-208ENST00000550283 KDM2BQ8NHM5 1336 aa14.1□□□□□ -0.15
RAB5B-208ENST00000550283 ECE2O60344 883 aa14.09□□□□□ -0.15
RAB5B-208ENST00000550283 SCNN1DP51172 638 aa14.09□□□□□ -0.15
RAB5B-208ENST00000550283 PTPN12Q05209 780 aaKnown RBP14.09□□□□□ -0.15
RAB5B-208ENST00000550283 LDHAL6AQ6ZMR3 332 aa14.09□□□□□ -0.15
RAB5B-208ENST00000550283 DZIP1LQ8IYY4 767 aaKnown RBP14.09□□□□□ -0.15
RAB5B-208ENST00000550283 JDP2Q8WYK2 163 aa14.09□□□□□ -0.15
RAB5B-208ENST00000550283 L3MBTL3Q96JM7 780 aaPredicted RBP14.09□□□□□ -0.15
RAB5B-208ENST00000550283 MPHOSPH8Q99549 860 aa14.09□□□□□ -0.15
RAB5B-208ENST00000550283 TMX4Q9H1E5 349 aaPredicted RBP14.09□□□□□ -0.15
RAB5B-208ENST00000550283 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.09□□□□□ -0.15
RAB5B-208ENST00000550283 ZNF646O15015 1829 aaPredicted RBP14.08□□□□□ -0.15
RAB5B-208ENST00000550283 ATP2B4P23634 1241 aa14.08□□□□□ -0.16
RAB5B-208ENST00000550283 EPS15P42566 896 aa14.08□□□□□ -0.16
RAB5B-208ENST00000550283 ATG9AQ7Z3C6 839 aa14.08□□□□□ -0.16
RAB5B-208ENST00000550283 MXD3Q9BW11 206 aa14.08□□□□□ -0.16
RAB5B-208ENST00000550283 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
RAB5B-208ENST00000550283 ZNF804BA4D1E1 1349 aa14.08□□□□□ -0.16
RAB5B-208ENST00000550283 PNMA6EA0A0J9YXQ4 647 aa14.07□□□□□ -0.16
RAB5B-208ENST00000550283 PSMD14O00487 310 aa14.07□□□□□ -0.16
RAB5B-208ENST00000550283 ZBTB7BO15156 539 aaPredicted RBP14.07□□□□□ -0.16
RAB5B-208ENST00000550283 DPY19L2Q6NUT2 758 aa14.07□□□□□ -0.16
RAB5B-208ENST00000550283 GPC2Q8N158 579 aa14.07□□□□□ -0.16
RAB5B-208ENST00000550283 VGLL2Q8N8G2 317 aa14.07□□□□□ -0.16
RAB5B-208ENST00000550283 VPS33BQ9H267 617 aa14.07□□□□□ -0.16
RAB5B-208ENST00000550283 EGFRP00533 1210 aa14.06□□□□□ -0.16
RAB5B-208ENST00000550283 CENPBP07199 599 aaPredicted RBP14.06□□□□□ -0.16
RAB5B-208ENST00000550283 GMPSP49915 693 aaPredicted RBP14.06□□□□□ -0.16
RAB5B-208ENST00000550283 EIF6P56537 245 aaKnown RBP14.06□□□□□ -0.16
RAB5B-208ENST00000550283 TAF7LQ5H9L4 462 aa14.06□□□□□ -0.16
RAB5B-208ENST00000550283 ITPRIPQ8IWB1 547 aa14.06□□□□□ -0.16
RAB5B-208ENST00000550283 TNS4Q8IZW8 715 aa14.06□□□□□ -0.16
RAB5B-208ENST00000550283 ZC3H12CQ9C0D7 883 aaKnown RBP14.06□□□□□ -0.16
RAB5B-208ENST00000550283 SIL1Q9H173 461 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms