RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 GOLGA2Q08379 1002 aa19.98■□□□□ 0.79
RAB5C-205ENST00000550013 ZBTB38Q8NAP3 1195 aaPredicted RBP19.98■□□□□ 0.79
RAB5C-205ENST00000550013 EYA3Q99504 573 aa19.98■□□□□ 0.79
RAB5C-205ENST00000550013 RBM26Q5T8P6 1007 aaKnown RBP19.97■□□□□ 0.79
RAB5C-205ENST00000550013 MYD88Q99836 296 aa19.97■□□□□ 0.79
RAB5C-205ENST00000550013 IFT57Q9NWB7 429 aa19.97■□□□□ 0.79
RAB5C-205ENST00000550013 RPS12P25398 132 aaKnown RBP19.96■□□□□ 0.79
RAB5C-205ENST00000550013 HUNKP57058 714 aa19.96■□□□□ 0.79
RAB5C-205ENST00000550013 KRT26Q7Z3Y9 468 aa19.96■□□□□ 0.79
RAB5C-205ENST00000550013 JARID2Q92833 1246 aaPredicted RBP19.96■□□□□ 0.79
RAB5C-205ENST00000550013 ZIC5Q96T25 663 aa19.96■□□□□ 0.79
RAB5C-205ENST00000550013 PRKRIP1Q9H875 184 aaPredicted RBP19.96■□□□□ 0.79
RAB5C-205ENST00000550013 UFL1O94874 794 aa19.95■□□□□ 0.78
RAB5C-205ENST00000550013 BRPF1P55201 1214 aaPredicted RBP19.95■□□□□ 0.78
RAB5C-205ENST00000550013 GNAI1P63096 354 aa19.95■□□□□ 0.78
RAB5C-205ENST00000550013 C8orf58Q8NAV2 365 aa19.95■□□□□ 0.78
RAB5C-205ENST00000550013 ADM5C9JUS6 153 aa19.94■□□□□ 0.78
RAB5C-205ENST00000550013 CCDC85AQ96PX6 553 aaPredicted RBP19.94■□□□□ 0.78
RAB5C-205ENST00000550013 ZC3H12CQ9C0D7 883 aaKnown RBP19.94■□□□□ 0.78
RAB5C-205ENST00000550013 PODXL2Q9NZ53 605 aa19.94■□□□□ 0.78
RAB5C-205ENST00000550013 CCDC85CA6NKD9 419 aa19.93■□□□□ 0.78
RAB5C-205ENST00000550013 CA12O43570 354 aa19.93■□□□□ 0.78
RAB5C-205ENST00000550013 PCCAP05165 728 aaPredicted RBP19.93■□□□□ 0.78
RAB5C-205ENST00000550013 CCDC191Q8NCU4 936 aa19.93■□□□□ 0.78
RAB5C-205ENST00000550013 ANKIB1Q9P2G1 1089 aa19.93■□□□□ 0.78
RAB5C-205ENST00000550013 PSME4Q14997 1843 aa19.92■□□□□ 0.78
RAB5C-205ENST00000550013 VIL1P09327 827 aaKnown RBP19.92■□□□□ 0.78
RAB5C-205ENST00000550013 NOGQ13253 232 aa19.92■□□□□ 0.78
RAB5C-205ENST00000550013 KIF4BQ2VIQ3 1234 aa19.92■□□□□ 0.78
RAB5C-205ENST00000550013 CCDC152Q4G0S7 254 aa19.92■□□□□ 0.78
RAB5C-205ENST00000550013 DCPSQ96C86 337 aaKnown RBP19.92■□□□□ 0.78
RAB5C-205ENST00000550013 CWC25Q9NXE8 425 aaPredicted RBP19.92■□□□□ 0.78
RAB5C-205ENST00000550013 GGA1Q9UJY5 639 aa19.92■□□□□ 0.78
RAB5C-205ENST00000550013 ASTN2O75129 1339 aaPredicted RBP19.92■□□□□ 0.78
RAB5C-205ENST00000550013 G3V3G9 751 aa19.91■□□□□ 0.78
RAB5C-205ENST00000550013 PDE8AO60658 829 aa19.91■□□□□ 0.78
RAB5C-205ENST00000550013 HSP90B1P14625 803 aaKnown RBP19.91■□□□□ 0.78
RAB5C-205ENST00000550013 CALD1Q05682 793 aaKnown RBP19.91■□□□□ 0.78
RAB5C-205ENST00000550013 DCAF8Q5TAQ9 597 aa19.91■□□□□ 0.78
RAB5C-205ENST00000550013 METTL22Q9BUU2 404 aaPredicted RBP19.91■□□□□ 0.78
RAB5C-205ENST00000550013 GBA2Q9HCG7 927 aaPredicted RBP19.91■□□□□ 0.78
RAB5C-205ENST00000550013 GGA3Q9NZ52 723 aa19.91■□□□□ 0.78
RAB5C-205ENST00000550013 SPEF2Q9C093 1822 aa19.9■□□□□ 0.78
RAB5C-205ENST00000550013 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
RAB5C-205ENST00000550013 FAM155AB1AL88 458 aaPredicted RBP19.89■□□□□ 0.77
RAB5C-205ENST00000550013 RGMBQ6NW40 437 aa19.89■□□□□ 0.77
RAB5C-205ENST00000550013 TSPYL6Q8N831 410 aa19.89■□□□□ 0.77
RAB5C-205ENST00000550013 C2orf69Q8N8R5 385 aa19.89■□□□□ 0.77
RAB5C-205ENST00000550013 MCOLN1Q9GZU1 580 aa19.89■□□□□ 0.77
RAB5C-205ENST00000550013 MYH3P11055 1940 aa19.88■□□□□ 0.77
RAB5C-205ENST00000550013 DDX58O95786 925 aaKnown RBP19.88■□□□□ 0.77
RAB5C-205ENST00000550013 CCDC30Q5VVM6 783 aa19.88■□□□□ 0.77
RAB5C-205ENST00000550013 MAP3K2Q9Y2U5 619 aa19.88■□□□□ 0.77
RAB5C-205ENST00000550013 XDHP47989 1333 aa19.87■□□□□ 0.77
RAB5C-205ENST00000550013 WTIPA6NIX2 430 aaPredicted RBP19.87■□□□□ 0.77
RAB5C-205ENST00000550013 ZNF280AP59817 542 aaPredicted RBP19.87■□□□□ 0.77
RAB5C-205ENST00000550013 RSBN1LQ6PCB5 846 aaPredicted RBP19.87■□□□□ 0.77
RAB5C-205ENST00000550013 ANKRD18AQ8IVF6 992 aa19.87■□□□□ 0.77
RAB5C-205ENST00000550013 SULF1Q8IWU6 871 aa19.87■□□□□ 0.77
RAB5C-205ENST00000550013 ZNF609O15014 1411 aa19.86■□□□□ 0.77
RAB5C-205ENST00000550013 IGKV5-2P06315 115 aa19.86■□□□□ 0.77
RAB5C-205ENST00000550013 ZNF157P51786 506 aaPredicted RBP19.86■□□□□ 0.77
RAB5C-205ENST00000550013 CDCA5Q96FF9 252 aa19.86■□□□□ 0.77
RAB5C-205ENST00000550013 AKAP11Q9UKA4 1901 aa19.85■□□□□ 0.77
RAB5C-205ENST00000550013 CTSWP56202 376 aa19.85■□□□□ 0.77
RAB5C-205ENST00000550013 KIF23Q02241 960 aaPredicted RBP19.85■□□□□ 0.77
RAB5C-205ENST00000550013 DGKZQ13574 1117 aa19.85■□□□□ 0.77
RAB5C-205ENST00000550013 SCARF1Q14162 830 aa19.85■□□□□ 0.77
RAB5C-205ENST00000550013 ANGEL2Q5VTE6 544 aaKnown RBP19.85■□□□□ 0.77
RAB5C-205ENST00000550013 AGBL3Q8NEM8 1001 aa19.85■□□□□ 0.77
RAB5C-205ENST00000550013 TSR2Q969E8 191 aaKnown RBP19.85■□□□□ 0.77
RAB5C-205ENST00000550013 GMLQ99445 158 aa19.85■□□□□ 0.77
RAB5C-205ENST00000550013 PI4KAP2A4QPH2 592 aa19.84■□□□□ 0.77
RAB5C-205ENST00000550013 ATP2B4P23634 1241 aa19.84■□□□□ 0.77
RAB5C-205ENST00000550013 KSR2Q6VAB6 950 aa19.84■□□□□ 0.77
RAB5C-205ENST00000550013 PI4KAP1Q8N8J0 262 aa19.84■□□□□ 0.77
RAB5C-205ENST00000550013 CCDC102AQ96A19 550 aa19.84■□□□□ 0.77
RAB5C-205ENST00000550013 ZNF646O15015 1829 aaPredicted RBP19.83■□□□□ 0.77
RAB5C-205ENST00000550013 TTLL11Q8NHH1 800 aa19.83■□□□□ 0.77
RAB5C-205ENST00000550013 GREM2Q9H772 168 aa19.83■□□□□ 0.77
RAB5C-205ENST00000550013 USP17L3A6NCW0 530 aa19.82■□□□□ 0.76
RAB5C-205ENST00000550013 USP17L4A6NCW7 530 aa19.82■□□□□ 0.76
RAB5C-205ENST00000550013 SLC10A3P09131 477 aa19.82■□□□□ 0.76
RAB5C-205ENST00000550013 USP17L8P0C7I0 530 aa19.82■□□□□ 0.76
RAB5C-205ENST00000550013 RGS19P49795 217 aa19.82■□□□□ 0.76
RAB5C-205ENST00000550013 CWF19L2Q2TBE0 894 aaKnown RBP19.82■□□□□ 0.76
RAB5C-205ENST00000550013 USP17L1Q7RTZ2 530 aa19.82■□□□□ 0.76
RAB5C-205ENST00000550013 CDC5LQ99459 802 aaKnown RBP19.82■□□□□ 0.76
RAB5C-205ENST00000550013 CHMP4AQ9BY43 222 aa19.82■□□□□ 0.76
RAB5C-205ENST00000550013 MYOZ2Q9NPC6 264 aa19.82■□□□□ 0.76
RAB5C-205ENST00000550013 SCAF8Q9UPN6 1271 aaKnown RBP19.82■□□□□ 0.76
RAB5C-205ENST00000550013 MLLT1Q03111 559 aaPredicted RBP19.81■□□□□ 0.76
RAB5C-205ENST00000550013 CCDC184Q52MB2 194 aa19.81■□□□□ 0.76
RAB5C-205ENST00000550013 G2E3Q7L622 706 aa19.81■□□□□ 0.76
RAB5C-205ENST00000550013 PODNQ7Z5L7 613 aa19.81■□□□□ 0.76
RAB5C-205ENST00000550013 MINPP1Q9UNW1 487 aa19.81■□□□□ 0.76
RAB5C-205ENST00000550013 MED23Q9ULK4 1368 aa19.81■□□□□ 0.76
RAB5C-205ENST00000550013 PAPPA2Q9BXP8 1791 aa19.8■□□□□ 0.76
RAB5C-205ENST00000550013 TRPA1O75762 1119 aa19.8■□□□□ 0.76
RAB5C-205ENST00000550013 NEXNQ0ZGT2 675 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms