RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 CNTROBQ8N137 903 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 FRAT1Q92837 279 aaPredicted RBP9.17□□□□□ -0.94
PTCH1-219ENST00000549678 CELF1Q92879 486 aaKnown RBP9.17□□□□□ -0.94
PTCH1-219ENST00000549678 API5Q9BZZ5 524 aaKnown RBP9.17□□□□□ -0.94
PTCH1-219ENST00000549678 SEC31BQ9NQW1 1179 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 ADARB2Q9NS39 739 aaKnown RBP9.17□□□□□ -0.94
PTCH1-219ENST00000549678 ANKIB1Q9P2G1 1089 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 NSFL1CQ9UNZ2 370 aaKnown RBP9.17□□□□□ -0.94
PTCH1-219ENST00000549678 LRRC37AA6NMS7 1700 aa9.17□□□□□ -0.94
PTCH1-219ENST00000549678 ANKRD18BA2A2Z9 1011 aa9.16□□□□□ -0.94
PTCH1-219ENST00000549678 H7C1W4 665 aa9.16□□□□□ -0.94
PTCH1-219ENST00000549678 IPO8O15397 1037 aaKnown RBP9.16□□□□□ -0.94
PTCH1-219ENST00000549678 HSPA1AP0DMV8 641 aaKnown RBP9.16□□□□□ -0.94
PTCH1-219ENST00000549678 HSPA1BP0DMV9 641 aaKnown RBP9.16□□□□□ -0.94
PTCH1-219ENST00000549678 RPS8P62241 208 aaKnown RBP9.16□□□□□ -0.94
PTCH1-219ENST00000549678 AOC3Q16853 763 aa9.16□□□□□ -0.94
PTCH1-219ENST00000549678 CIAPIN1Q6FI81 312 aa9.16□□□□□ -0.94
PTCH1-219ENST00000549678 SLC51AQ86UW1 340 aa9.16□□□□□ -0.94
PTCH1-219ENST00000549678 ZC3H15Q8WU90 426 aaKnown RBP9.16□□□□□ -0.94
PTCH1-219ENST00000549678 EYA3Q99504 573 aa9.16□□□□□ -0.94
PTCH1-219ENST00000549678 MPHOSPH8Q99549 860 aa9.16□□□□□ -0.94
PTCH1-219ENST00000549678 GPRC5DQ9NZD1 345 aa9.16□□□□□ -0.94
PTCH1-219ENST00000549678 NOB1Q9ULX3 412 aaKnown RBP9.16□□□□□ -0.94
PTCH1-219ENST00000549678 COL4A5P29400 1685 aa9.16□□□□□ -0.94
PTCH1-219ENST00000549678 RASSF10A6NK89 507 aa9.15□□□□□ -0.94
PTCH1-219ENST00000549678 CCT4P50991 539 aaKnown RBP9.15□□□□□ -0.94
PTCH1-219ENST00000549678 RARSP54136 660 aaKnown RBP9.15□□□□□ -0.94
PTCH1-219ENST00000549678 CXCL9Q07325 125 aa9.15□□□□□ -0.94
PTCH1-219ENST00000549678 IFIT5Q13325 482 aaKnown RBP9.15□□□□□ -0.94
PTCH1-219ENST00000549678 CCDC57Q2TAC2 916 aa9.15□□□□□ -0.94
PTCH1-219ENST00000549678 FAM161AQ3B820 660 aa9.15□□□□□ -0.94
PTCH1-219ENST00000549678 TTLL11Q8NHH1 800 aa9.15□□□□□ -0.94
PTCH1-219ENST00000549678 YTHDC1Q96MU7 727 aaKnown RBP9.15□□□□□ -0.94
PTCH1-219ENST00000549678 GREM2Q9H772 168 aa9.15□□□□□ -0.94
PTCH1-219ENST00000549678 RIMBP2O15034 1052 aa9.14□□□□□ -0.95
PTCH1-219ENST00000549678 UFL1O94874 794 aa9.14□□□□□ -0.95
PTCH1-219ENST00000549678 ITGA6P23229 1130 aa9.14□□□□□ -0.95
PTCH1-219ENST00000549678 EPS15P42566 896 aa9.14□□□□□ -0.95
PTCH1-219ENST00000549678 KCNJ4P48050 445 aa9.14□□□□□ -0.95
PTCH1-219ENST00000549678 MAP1SQ66K74 1059 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-219ENST00000549678 FTSJ3Q8IY81 847 aaKnown RBP9.14□□□□□ -0.95
PTCH1-219ENST00000549678 DPF2Q92785 391 aa9.14□□□□□ -0.95
PTCH1-219ENST00000549678 PODXL2Q9NZ53 605 aa9.14□□□□□ -0.95
PTCH1-219ENST00000549678 MKRN1Q9UHC7 482 aaKnown RBP9.14□□□□□ -0.95
PTCH1-219ENST00000549678 GGA1Q9UJY5 639 aa9.14□□□□□ -0.95
PTCH1-219ENST00000549678 H7C1D1 291 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 RPS12P25398 132 aaKnown RBP9.13□□□□□ -0.95
PTCH1-219ENST00000549678 GMPSP49915 693 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-219ENST00000549678 GPSM2P81274 684 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 WASHC4Q2M389 1173 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 DEFB115Q30KQ5 88 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 ZKSCAN2Q63HK3 967 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 LMBR1LQ6UX01 489 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 PLA2G12BQ9BX93 195 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 ZC3H12CQ9C0D7 883 aaKnown RBP9.13□□□□□ -0.95
PTCH1-219ENST00000549678 CNNM1Q9NRU3 951 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 PGAP2Q9UHJ9 254 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 HDAC5Q9UQL6 1122 aa9.13□□□□□ -0.95
PTCH1-219ENST00000549678 RTL9Q8NET4 1388 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 XDHP47989 1333 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 LTBP1Q14766 1721 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 BCAR3O75815 825 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 NBPF7P0C2Y1 421 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-219ENST00000549678 UBTFL1P0CB47 393 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-219ENST00000549678 ECE1P42892 770 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 VEGFBP49765 207 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-219ENST00000549678 CLUAP1Q96AJ1 413 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 AIDAQ96BJ3 306 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 SUCLG2Q96I99 432 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 PRDM10Q9NQV6 1147 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 COL4A1P02462 1669 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 DUOX1Q9NRD9 1551 aa9.12□□□□□ -0.95
PTCH1-219ENST00000549678 YDJCA8MPS7 323 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 PLIN1O60240 522 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 RAD17O75943 681 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 ATP2B4P23634 1241 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 CTCFP49711 727 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-219ENST00000549678 BRPF1P55201 1214 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-219ENST00000549678 CASP7P55210 303 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 MAP2K1Q02750 393 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-219ENST00000549678 ATF7IPQ6VMQ6 1270 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 TNS4Q8IZW8 715 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 TBC1D16Q8TBP0 767 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 FBXW7Q969H0 707 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 HHIPL1Q96JK4 782 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 GPR101Q96P66 508 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-219ENST00000549678 ANKRD2Q9GZV1 360 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 BICC1Q9H694 974 aaKnown RBP9.11□□□□□ -0.95
PTCH1-219ENST00000549678 DBNDD1Q9H9R9 158 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 BSDC1Q9NW68 430 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-219ENST00000549678 POLLQ9UGP5 575 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 CNOT7Q9UIV1 285 aaKnown RBP9.11□□□□□ -0.95
PTCH1-219ENST00000549678 ABT1Q9ULW3 272 aaKnown RBP9.11□□□□□ -0.95
PTCH1-219ENST00000549678 TRPM7Q96QT4 1865 aa9.11□□□□□ -0.95
PTCH1-219ENST00000549678 A0A1B0GUL6 1792 aa9.1□□□□□ -0.95
PTCH1-219ENST00000549678 CSF1RP07333 972 aa9.1□□□□□ -0.95
PTCH1-219ENST00000549678 FOXO4P98177 505 aa9.1□□□□□ -0.95
PTCH1-219ENST00000549678 DOK7Q18PE1 504 aa9.1□□□□□ -0.95
PTCH1-219ENST00000549678 LDHAL6AQ6ZMR3 332 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms