RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 KIF1BPQ96EK5 621 aa12.08□□□□□ -0.48
SMARCD1-206ENST00000549274 PCDHB15Q9Y5E8 787 aa12.08□□□□□ -0.48
SMARCD1-206ENST00000549274 SPEF2Q9C093 1822 aa12.08□□□□□ -0.48
SMARCD1-206ENST00000549274 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
SMARCD1-206ENST00000549274 EYA2O00167 538 aa12.07□□□□□ -0.48
SMARCD1-206ENST00000549274 PPEF1O14829 653 aaPredicted RBP12.07□□□□□ -0.48
SMARCD1-206ENST00000549274 SURF6O75683 361 aaKnown RBP12.07□□□□□ -0.48
SMARCD1-206ENST00000549274 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
SMARCD1-206ENST00000549274 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
SMARCD1-206ENST00000549274 KIAA1551Q9HCM1 1747 aa12.07□□□□□ -0.48
SMARCD1-206ENST00000549274 AKAP2Q9Y2D5 859 aa12.07□□□□□ -0.48
SMARCD1-206ENST00000549274 LRRC37AA6NMS7 1700 aa12.06□□□□□ -0.48
SMARCD1-206ENST00000549274 RFX5P48382 616 aaPredicted RBP12.06□□□□□ -0.48
SMARCD1-206ENST00000549274 C3orf67Q6ZVT6 689 aa12.06□□□□□ -0.48
SMARCD1-206ENST00000549274 SP8Q8IXZ3 490 aa12.06□□□□□ -0.48
SMARCD1-206ENST00000549274 CCDC85AQ96PX6 553 aaPredicted RBP12.06□□□□□ -0.48
SMARCD1-206ENST00000549274 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
SMARCD1-206ENST00000549274 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
SMARCD1-206ENST00000549274 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
SMARCD1-206ENST00000549274 DPEP1P16444 411 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 CCDC93Q567U6 631 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 METTL24Q5JXM2 366 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 PRPF40BQ6NWY9 871 aaKnown RBP12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 RTKN2Q8IZC4 609 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 SUPT20HQ8NEM7 779 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 LRRCC1Q9C099 1032 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 FHDC1Q9C0D6 1143 aaPredicted RBP12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 GPR108Q9NPR9 543 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 LEMD3Q9Y2U8 911 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 XDHP47989 1333 aa12.05□□□□□ -0.48
SMARCD1-206ENST00000549274 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 CHRNA5P30532 468 aa12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 SMC5Q8IY18 1101 aa12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 CLASRPQ8N2M8 674 aaKnown RBP12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 CELF1Q92879 486 aaKnown RBP12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 SYT17Q9BSW7 474 aa12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 VPS33BQ9H267 617 aa12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 PODXL2Q9NZ53 605 aa12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 DAXXQ9UER7 740 aaPredicted RBP12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 SLX4Q8IY92 1834 aa12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 TAF1P21675 1872 aa12.04□□□□□ -0.48
SMARCD1-206ENST00000549274 PDE8BO95263 885 aa12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 KCNJ4P48050 445 aa12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 UBE4AQ14139 1066 aa12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 PUM3Q15397 648 aaKnown RBP12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 GPATCH3Q96I76 525 aa12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 EYA3Q99504 573 aa12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 SIL1Q9H173 461 aa12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 ANKIB1Q9P2G1 1089 aa12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
SMARCD1-206ENST00000549274 A0A1B0GUL6 1792 aa12.02□□□□□ -0.48
SMARCD1-206ENST00000549274 SLC5A1P13866 664 aa12.02□□□□□ -0.49
SMARCD1-206ENST00000549274 KCNA3P22001 575 aa12.02□□□□□ -0.49
SMARCD1-206ENST00000549274 CHRNDQ07001 517 aa12.02□□□□□ -0.49
SMARCD1-206ENST00000549274 RHPN1Q8TCX5 695 aa12.02□□□□□ -0.49
SMARCD1-206ENST00000549274 ZNF594Q96JF6 807 aaPredicted RBP12.02□□□□□ -0.49
SMARCD1-206ENST00000549274 GGA1Q9UJY5 639 aa12.02□□□□□ -0.49
SMARCD1-206ENST00000549274 PA2G4Q9UQ80 394 aaKnown RBP12.02□□□□□ -0.49
SMARCD1-206ENST00000549274 EXOC6BQ9Y2D4 811 aa12.02□□□□□ -0.49
SMARCD1-206ENST00000549274 LRRC24Q50LG9 513 aa12.01□□□□□ -0.49
SMARCD1-206ENST00000549274 DPP8Q6V1X1 898 aaPredicted RBP12.01□□□□□ -0.49
SMARCD1-206ENST00000549274 ATG9AQ7Z3C6 839 aa12.01□□□□□ -0.49
SMARCD1-206ENST00000549274 MPNDQ8N594 471 aa12.01□□□□□ -0.49
SMARCD1-206ENST00000549274 LPIN2Q92539 896 aa12.01□□□□□ -0.49
SMARCD1-206ENST00000549274 PSMD1Q99460 953 aa12.01□□□□□ -0.49
SMARCD1-206ENST00000549274 ARAP2Q8WZ64 1704 aa12□□□□□ -0.49
SMARCD1-206ENST00000549274 GRIN3BO60391 1043 aa12□□□□□ -0.49
SMARCD1-206ENST00000549274 ATP2B3Q16720 1220 aa12□□□□□ -0.49
SMARCD1-206ENST00000549274 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
SMARCD1-206ENST00000549274 BCS1LQ9Y276 419 aa12□□□□□ -0.49
SMARCD1-206ENST00000549274 LTBP3Q9NS15 1303 aa12□□□□□ -0.49
SMARCD1-206ENST00000549274 FER1L6Q2WGJ9 1857 aa12□□□□□ -0.49
SMARCD1-206ENST00000549274 IFIT2P09913 472 aaKnown RBP11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 TPRNQ4KMQ1 711 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 CAVIN4Q5BKX8 364 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 ANKRD45Q5TZF3 282 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 C15orf52Q6ZUT6 534 aaKnown RBP11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 VGLL2Q8N8G2 317 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 NLGN2Q8NFZ4 835 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 C7orf43Q8WVR3 580 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 RTFDC1Q9BY42 306 aaPredicted RBP11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 GNL3LQ9NVN8 582 aaKnown RBP11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 NSFL1CQ9UNZ2 370 aaKnown RBP11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 ZNF804BA4D1E1 1349 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 MED23Q9ULK4 1368 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 ZNF609O15014 1411 aa11.99□□□□□ -0.49
SMARCD1-206ENST00000549274 LTBP1Q14766 1721 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 C21orf2O43822 256 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 UFL1O94874 794 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 SASH1O94885 1247 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 IGHDP01880 384 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 FKBP4Q02790 459 aaKnown RBP eCLIP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms