RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CDHR2Q9BYE9 1310 aa15.53■□□□□ 0.08
TRAFD1-205ENST00000548277 RPS8P62241 208 aaKnown RBP15.53■□□□□ 0.08
TRAFD1-205ENST00000548277 TBC1D16Q8TBP0 767 aa15.53■□□□□ 0.08
TRAFD1-205ENST00000548277 DCPSQ96C86 337 aaKnown RBP15.53■□□□□ 0.08
TRAFD1-205ENST00000548277 MCOLN1Q9GZU1 580 aa15.53■□□□□ 0.08
TRAFD1-205ENST00000548277 HYPKQ9NX55 129 aa15.53■□□□□ 0.08
TRAFD1-205ENST00000548277 DGKZQ13574 1117 aa15.52■□□□□ 0.08
TRAFD1-205ENST00000548277 DPF2Q92785 391 aa15.52■□□□□ 0.08
TRAFD1-205ENST00000548277 EYA3Q99504 573 aa15.52■□□□□ 0.08
TRAFD1-205ENST00000548277 MYD88Q99836 296 aa15.52■□□□□ 0.08
TRAFD1-205ENST00000548277 ZC3H12CQ9C0D7 883 aaKnown RBP15.52■□□□□ 0.08
TRAFD1-205ENST00000548277 MBIPQ9NS73 344 aa15.52■□□□□ 0.08
TRAFD1-205ENST00000548277 ANKIB1Q9P2G1 1089 aa15.52■□□□□ 0.08
TRAFD1-205ENST00000548277 SPEF2Q9C093 1822 aa15.52■□□□□ 0.07
TRAFD1-205ENST00000548277 ASTN2O75129 1339 aaPredicted RBP15.51■□□□□ 0.07
TRAFD1-205ENST00000548277 BRPF1P55201 1214 aaPredicted RBP15.51■□□□□ 0.07
TRAFD1-205ENST00000548277 MLLT1Q03111 559 aaPredicted RBP15.51■□□□□ 0.07
TRAFD1-205ENST00000548277 C2orf69Q8N8R5 385 aa15.51■□□□□ 0.07
TRAFD1-205ENST00000548277 HHIPL1Q96JK4 782 aa15.51■□□□□ 0.07
TRAFD1-205ENST00000548277 GBA2Q9HCG7 927 aaPredicted RBP15.51■□□□□ 0.07
TRAFD1-205ENST00000548277 RTL9Q8NET4 1388 aa15.5■□□□□ 0.07
TRAFD1-205ENST00000548277 UFL1O94874 794 aa15.5■□□□□ 0.07
TRAFD1-205ENST00000548277 ZNF157P51786 506 aaPredicted RBP15.5■□□□□ 0.07
TRAFD1-205ENST00000548277 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
TRAFD1-205ENST00000548277 NOGQ13253 232 aa15.5■□□□□ 0.07
TRAFD1-205ENST00000548277 KIF4BQ2VIQ3 1234 aa15.5■□□□□ 0.07
TRAFD1-205ENST00000548277 RGMBQ6NW40 437 aa15.5■□□□□ 0.07
TRAFD1-205ENST00000548277 CA12O43570 354 aa15.49■□□□□ 0.07
TRAFD1-205ENST00000548277 HOXB7P09629 217 aa15.49■□□□□ 0.07
TRAFD1-205ENST00000548277 KIF23Q02241 960 aaPredicted RBP15.49■□□□□ 0.07
TRAFD1-205ENST00000548277 ZBTB38Q8NAP3 1195 aaPredicted RBP15.49■□□□□ 0.07
TRAFD1-205ENST00000548277 SCAF8Q9UPN6 1271 aaKnown RBP15.49■□□□□ 0.07
TRAFD1-205ENST00000548277 GGA3Q9NZ52 723 aa15.48■□□□□ 0.07
TRAFD1-205ENST00000548277 GGA1Q9UJY5 639 aa15.48■□□□□ 0.07
TRAFD1-205ENST00000548277 FAM155AB1AL88 458 aaPredicted RBP15.47■□□□□ 0.07
TRAFD1-205ENST00000548277 APAF1O14727 1248 aa15.47■□□□□ 0.07
TRAFD1-205ENST00000548277 TRPA1O75762 1119 aa15.47■□□□□ 0.07
TRAFD1-205ENST00000548277 VIL1P09327 827 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-205ENST00000548277 RPS12P25398 132 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-205ENST00000548277 TRIM28Q13263 835 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-205ENST00000548277 SULF1Q8IWU6 871 aa15.47■□□□□ 0.07
TRAFD1-205ENST00000548277 PSME4Q14997 1843 aa15.47■□□□□ 0.07
TRAFD1-205ENST00000548277 MYH3P11055 1940 aa15.47■□□□□ 0.07
TRAFD1-205ENST00000548277 WTIPA6NIX2 430 aaPredicted RBP15.46■□□□□ 0.07
TRAFD1-205ENST00000548277 PDE8AO60658 829 aa15.46■□□□□ 0.07
TRAFD1-205ENST00000548277 SCARF1Q14162 830 aa15.46■□□□□ 0.07
TRAFD1-205ENST00000548277 CCDC152Q4G0S7 254 aa15.45■□□□□ 0.06
TRAFD1-205ENST00000548277 ANGEL2Q5VTE6 544 aaKnown RBP15.45■□□□□ 0.06
TRAFD1-205ENST00000548277 ANKRD18AQ8IVF6 992 aa15.45■□□□□ 0.06
TRAFD1-205ENST00000548277 C8orf58Q8NAV2 365 aa15.45■□□□□ 0.06
TRAFD1-205ENST00000548277 FBXW7Q969H0 707 aa15.45■□□□□ 0.06
TRAFD1-205ENST00000548277 CCDC102AQ96A19 550 aa15.45■□□□□ 0.06
TRAFD1-205ENST00000548277 CDCA5Q96FF9 252 aa15.45■□□□□ 0.06
TRAFD1-205ENST00000548277 PODXL2Q9NZ53 605 aa15.45■□□□□ 0.06
TRAFD1-205ENST00000548277 PCCAP05165 728 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-205ENST00000548277 ZNF853P0CG23 659 aa15.44■□□□□ 0.06
TRAFD1-205ENST00000548277 RGS19P49795 217 aa15.44■□□□□ 0.06
TRAFD1-205ENST00000548277 PRAMEF18Q5VWM3 479 aa15.44■□□□□ 0.06
TRAFD1-205ENST00000548277 RSBN1LQ6PCB5 846 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-205ENST00000548277 CCDC191Q8NCU4 936 aa15.44■□□□□ 0.06
TRAFD1-205ENST00000548277 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
TRAFD1-205ENST00000548277 RNF186Q9NXI6 227 aa15.44■□□□□ 0.06
TRAFD1-205ENST00000548277 HSP90B1P14625 803 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-205ENST00000548277 GNAI1P63096 354 aa15.43■□□□□ 0.06
TRAFD1-205ENST00000548277 MOB2Q70IA6 237 aa15.43■□□□□ 0.06
TRAFD1-205ENST00000548277 CSRNP1Q96S65 589 aa15.43■□□□□ 0.06
TRAFD1-205ENST00000548277 METTL22Q9BUU2 404 aaPredicted RBP15.43■□□□□ 0.06
TRAFD1-205ENST00000548277 MXD3Q9BW11 206 aa15.43■□□□□ 0.06
TRAFD1-205ENST00000548277 IFT57Q9NWB7 429 aa15.43■□□□□ 0.06
TRAFD1-205ENST00000548277 MAP3K2Q9Y2U5 619 aa15.43■□□□□ 0.06
TRAFD1-205ENST00000548277 TSPYL6Q8N831 410 aa15.42■□□□□ 0.06
TRAFD1-205ENST00000548277 USP17L3A6NCW0 530 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 USP17L4A6NCW7 530 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 DDX58O95786 925 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 SLC10A3P09131 477 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 USP17L8P0C7I0 530 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 ATP2B4P23634 1241 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 CCDC30Q5VVM6 783 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 USP17L1Q7RTZ2 530 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 AGBL3Q8NEM8 1001 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 MYOZ2Q9NPC6 264 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 XDHP47989 1333 aa15.41■□□□□ 0.06
TRAFD1-205ENST00000548277 PI4KAP2A4QPH2 592 aa15.4■□□□□ 0.06
TRAFD1-205ENST00000548277 UBE2Q2LH0YL09 131 aa15.4■□□□□ 0.06
TRAFD1-205ENST00000548277 SOX10P56693 466 aa15.4■□□□□ 0.06
TRAFD1-205ENST00000548277 TTLL12Q14166 644 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-205ENST00000548277 PI4KAP1Q8N8J0 262 aa15.4■□□□□ 0.06
TRAFD1-205ENST00000548277 PRKRIP1Q9H875 184 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-205ENST00000548277 ZNF280AP59817 542 aaPredicted RBP15.39■□□□□ 0.05
TRAFD1-205ENST00000548277 CALD1Q05682 793 aaKnown RBP15.39■□□□□ 0.05
TRAFD1-205ENST00000548277 MKRN3Q13064 507 aaKnown RBP15.39■□□□□ 0.05
TRAFD1-205ENST00000548277 CWF19L2Q2TBE0 894 aaKnown RBP15.39■□□□□ 0.05
TRAFD1-205ENST00000548277 NBPF9Q3BBW0 867 aa15.39■□□□□ 0.05
TRAFD1-205ENST00000548277 RASAL3Q86YV0 1011 aa15.39■□□□□ 0.05
TRAFD1-205ENST00000548277 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
TRAFD1-205ENST00000548277 GREM2Q9H772 168 aa15.39■□□□□ 0.05
TRAFD1-205ENST00000548277 MINPP1Q9UNW1 487 aa15.39■□□□□ 0.05
TRAFD1-205ENST00000548277 IGKV5-2P06315 115 aa15.38■□□□□ 0.05
TRAFD1-205ENST00000548277 CTSWP56202 376 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms