RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 MPNDQ8N594 471 aa14.21□□□□□ -0.13
CALCOCO1-208ENST00000547988 SUPT20HQ8NEM7 779 aa14.21□□□□□ -0.13
CALCOCO1-208ENST00000547988 RTFDC1Q9BY42 306 aaPredicted RBP14.21□□□□□ -0.13
CALCOCO1-208ENST00000547988 PODXL2Q9NZ53 605 aa14.21□□□□□ -0.13
CALCOCO1-208ENST00000547988 LMNB1P20700 586 aa14.2□□□□□ -0.14
CALCOCO1-208ENST00000547988 LDHAL6AQ6ZMR3 332 aa14.2□□□□□ -0.14
CALCOCO1-208ENST00000547988 SLC51AQ86UW1 340 aa14.2□□□□□ -0.14
CALCOCO1-208ENST00000547988 NSFL1CQ9UNZ2 370 aaKnown RBP14.2□□□□□ -0.14
CALCOCO1-208ENST00000547988 XDHP47989 1333 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 SRGAP3O43295 1099 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 RFX5P48382 616 aaPredicted RBP14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 GPSM2P81274 684 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 ZNF594Q96JF6 807 aaPredicted RBP14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 ANKRD2Q9GZV1 360 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 VPS33BQ9H267 617 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 CNNM1Q9NRU3 951 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 ZBTB40Q9NUA8 1239 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 ANKIB1Q9P2G1 1089 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 MINPP1Q9UNW1 487 aa14.19□□□□□ -0.14
CALCOCO1-208ENST00000547988 ZC3H4Q9UPT8 1303 aaKnown RBP14.18□□□□□ -0.14
CALCOCO1-208ENST00000547988 ZNF646O15015 1829 aaPredicted RBP14.18□□□□□ -0.14
CALCOCO1-208ENST00000547988 IARSP41252 1262 aaKnown RBP14.18□□□□□ -0.14
CALCOCO1-208ENST00000547988 PTPN12Q05209 780 aaKnown RBP14.18□□□□□ -0.14
CALCOCO1-208ENST00000547988 C1orf115Q9H7X2 142 aa14.18□□□□□ -0.14
CALCOCO1-208ENST00000547988 SUPT16HQ9Y5B9 1047 aaKnown RBP14.18□□□□□ -0.14
CALCOCO1-208ENST00000547988 SCN9AQ15858 1988 aa14.18□□□□□ -0.14
CALCOCO1-208ENST00000547988 ATP2B4P23634 1241 aa14.17□□□□□ -0.14
CALCOCO1-208ENST00000547988 PRELPP51888 382 aa14.17□□□□□ -0.14
CALCOCO1-208ENST00000547988 ATP8B2P98198 1209 aa14.17□□□□□ -0.14
CALCOCO1-208ENST00000547988 CHRNDQ07001 517 aa14.17□□□□□ -0.14
CALCOCO1-208ENST00000547988 COPRSQ9NQ92 184 aa14.17□□□□□ -0.14
CALCOCO1-208ENST00000547988 ZNF277Q9NRM2 450 aaPredicted RBP14.17□□□□□ -0.14
CALCOCO1-208ENST00000547988 RNF181Q9P0P0 153 aa14.17□□□□□ -0.14
CALCOCO1-208ENST00000547988 GGA1Q9UJY5 639 aa14.17□□□□□ -0.14
CALCOCO1-208ENST00000547988 COL4A5P29400 1685 aa14.17□□□□□ -0.14
CALCOCO1-208ENST00000547988 MROH5Q6ZUA9 1318 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 PNMA6EA0A0J9YXQ4 647 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 C6orf229H3BNL8 230 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 CIAO1O76071 339 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 UFL1O94874 794 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 C9orf131Q5VYM1 1079 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 CEP85Q6P2H3 762 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 KLHDC4Q8TBB5 520 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 TBC1D16Q8TBP0 767 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 SSH3Q8TE77 659 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 EYA3Q99504 573 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 POLLQ9UGP5 575 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 LEMD3Q9Y2U8 911 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 RIPOR2Q9Y4F9 1068 aa14.16□□□□□ -0.14
CALCOCO1-208ENST00000547988 MED23Q9ULK4 1368 aa14.15□□□□□ -0.14
CALCOCO1-208ENST00000547988 EYA2O00167 538 aa14.15□□□□□ -0.14
CALCOCO1-208ENST00000547988 PPIP5K2O43314 1243 aa14.15□□□□□ -0.14
CALCOCO1-208ENST00000547988 KIAA2012Q0VF49 1180 aa14.15□□□□□ -0.14
CALCOCO1-208ENST00000547988 POLA2Q14181 598 aa14.15□□□□□ -0.14
CALCOCO1-208ENST00000547988 RPAP2Q8IXW5 612 aaPredicted RBP14.15□□□□□ -0.14
CALCOCO1-208ENST00000547988 PUS3Q9BZE2 481 aaKnown RBP14.15□□□□□ -0.14
CALCOCO1-208ENST00000547988 SCN4AP35499 1836 aa14.15□□□□□ -0.14
CALCOCO1-208ENST00000547988 WASHC4Q2M389 1173 aa14.14□□□□□ -0.15
CALCOCO1-208ENST00000547988 LRRC24Q50LG9 513 aa14.14□□□□□ -0.15
CALCOCO1-208ENST00000547988 LARGE2Q8N3Y3 721 aa14.14□□□□□ -0.15
CALCOCO1-208ENST00000547988 CRBNQ96SW2 442 aa14.14□□□□□ -0.15
CALCOCO1-208ENST00000547988 ZNF804BA4D1E1 1349 aa14.14□□□□□ -0.15
CALCOCO1-208ENST00000547988 WDR90Q96KV7 1748 aa14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 IL15P40933 162 aaPredicted RBP14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 KCNJ4P48050 445 aa14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 AAMPQ13685 434 aa14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 AOC3Q16853 763 aa14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 METTL24Q5JXM2 366 aa14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 ATG9AQ7Z3C6 839 aa14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 VGLL2Q8N8G2 317 aa14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 JDP2Q8WYK2 163 aa14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 ZC3H12CQ9C0D7 883 aaKnown RBP14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 SIL1Q9H173 461 aa14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 PA2G4Q9UQ80 394 aaKnown RBP14.13□□□□□ -0.15
CALCOCO1-208ENST00000547988 HMMRO75330 724 aa14.12□□□□□ -0.15
CALCOCO1-208ENST00000547988 TAF5LO75529 589 aa14.12□□□□□ -0.15
CALCOCO1-208ENST00000547988 PDE8BO95263 885 aa14.12□□□□□ -0.15
CALCOCO1-208ENST00000547988 CENPBP07199 599 aaPredicted RBP14.12□□□□□ -0.15
CALCOCO1-208ENST00000547988 UBE4AQ14139 1066 aa14.12□□□□□ -0.15
CALCOCO1-208ENST00000547988 NIM1KQ8IY84 436 aa14.12□□□□□ -0.15
CALCOCO1-208ENST00000547988 HELBQ8NG08 1087 aaPredicted RBP14.12□□□□□ -0.15
CALCOCO1-208ENST00000547988 C15orf52Q6ZUT6 534 aaKnown RBP14.11□□□□□ -0.15
CALCOCO1-208ENST00000547988 FZD9O00144 591 aa14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 RIMBP2O15034 1052 aa14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 YY1P25490 414 aa14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 G3BP1Q13283 466 aaKnown RBP eCLIP14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 PUM3Q15397 648 aaKnown RBP14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 SIRT2Q8IXJ6 389 aa14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 GPR101Q96P66 508 aaPredicted RBP14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 CEP126Q9P2H0 1117 aa14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 NOP58Q9Y2X3 529 aaKnown RBP14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 IRS2Q9Y4H2 1338 aa14.1□□□□□ -0.15
CALCOCO1-208ENST00000547988 WTIPA6NIX2 430 aaPredicted RBP14.09□□□□□ -0.15
CALCOCO1-208ENST00000547988 SURF6O75683 361 aaKnown RBP14.09□□□□□ -0.15
CALCOCO1-208ENST00000547988 ZNRF3Q9ULT6 936 aa14.09□□□□□ -0.15
CALCOCO1-208ENST00000547988 G3V3G9 751 aa14.08□□□□□ -0.16
CALCOCO1-208ENST00000547988 ECE2O60344 883 aa14.08□□□□□ -0.16
CALCOCO1-208ENST00000547988 FGFR2P21802 821 aa14.08□□□□□ -0.16
CALCOCO1-208ENST00000547988 EIF6P56537 245 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms