RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 KIF3AQ9Y496 699 aa20.38■□□□□ 0.85
LETMD1-210ENST00000547555 RPAP1Q9BWH6 1393 aaPredicted RBP20.37■□□□□ 0.85
LETMD1-210ENST00000547555 GIGYF2Q6Y7W6 1299 aaKnown RBP20.37■□□□□ 0.85
LETMD1-210ENST00000547555 LRRCC1Q9C099 1032 aa20.37■□□□□ 0.85
LETMD1-210ENST00000547555 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.37■□□□□ 0.85
LETMD1-210ENST00000547555 PI4KAP2A4QPH2 592 aa20.36■□□□□ 0.85
LETMD1-210ENST00000547555 PSDA5PKW4 1024 aaPredicted RBP20.36■□□□□ 0.85
LETMD1-210ENST00000547555 HLFQ16534 295 aa20.36■□□□□ 0.85
LETMD1-210ENST00000547555 PI4KAP1Q8N8J0 262 aa20.36■□□□□ 0.85
LETMD1-210ENST00000547555 CHMLP26374 656 aa20.35■□□□□ 0.85
LETMD1-210ENST00000547555 CHAF1AQ13111 956 aaPredicted RBP20.35■□□□□ 0.85
LETMD1-210ENST00000547555 ZNF652Q9Y2D9 606 aa20.35■□□□□ 0.85
LETMD1-210ENST00000547555 AFDNP55196 1824 aaKnown RBP20.35■□□□□ 0.85
LETMD1-210ENST00000547555 RIC3Q7Z5B4 369 aa20.35■□□□□ 0.85
LETMD1-210ENST00000547555 MAP3K2Q9Y2U5 619 aa20.35■□□□□ 0.85
LETMD1-210ENST00000547555 HSPA4P34932 840 aa20.34■□□□□ 0.85
LETMD1-210ENST00000547555 OTUD7AQ8TE49 926 aaPredicted RBP20.34■□□□□ 0.85
LETMD1-210ENST00000547555 NSFL1CQ9UNZ2 370 aaKnown RBP20.34■□□□□ 0.85
LETMD1-210ENST00000547555 RAB11FIP3O75154 756 aa20.33■□□□□ 0.85
LETMD1-210ENST00000547555 KDM4AO75164 1064 aa20.33■□□□□ 0.85
LETMD1-210ENST00000547555 DNTTIP2Q5QJE6 756 aaKnown RBP20.33■□□□□ 0.85
LETMD1-210ENST00000547555 DNAAF4Q8WXU2 420 aa20.33■□□□□ 0.85
LETMD1-210ENST00000547555 MEIS3Q99687 375 aa20.33■□□□□ 0.85
LETMD1-210ENST00000547555 METTL22Q9BUU2 404 aaPredicted RBP20.33■□□□□ 0.85
LETMD1-210ENST00000547555 TCHHQ07283 1943 aa20.33■□□□□ 0.84
LETMD1-210ENST00000547555 ATP8B2P98198 1209 aa20.32■□□□□ 0.84
LETMD1-210ENST00000547555 TCIRG1Q13488 830 aa20.32■□□□□ 0.84
LETMD1-210ENST00000547555 HSP90AB3PQ58FF7 597 aa20.32■□□□□ 0.84
LETMD1-210ENST00000547555 USP48Q86UV5 1035 aa20.32■□□□□ 0.84
LETMD1-210ENST00000547555 NLGN1Q8N2Q7 840 aa20.32■□□□□ 0.84
LETMD1-210ENST00000547555 FEZ1Q99689 392 aa20.32■□□□□ 0.84
LETMD1-210ENST00000547555 NRXN2Q9P2S2 1712 aa20.32■□□□□ 0.84
LETMD1-210ENST00000547555 F6X3S4 739 aa20.32■□□□□ 0.84
LETMD1-210ENST00000547555 TAF3Q5VWG9 929 aa20.32■□□□□ 0.84
LETMD1-210ENST00000547555 CCDC171Q6TFL3 1326 aa20.31■□□□□ 0.84
LETMD1-210ENST00000547555 ZSCAN22P10073 491 aaPredicted RBP20.31■□□□□ 0.84
LETMD1-210ENST00000547555 TBC1D9BQ66K14 1250 aa20.31■□□□□ 0.84
LETMD1-210ENST00000547555 ZNF34Q8IZ26 560 aa20.31■□□□□ 0.84
LETMD1-210ENST00000547555 PDCL2Q8N4E4 241 aa20.31■□□□□ 0.84
LETMD1-210ENST00000547555 ISCA1Q9BUE6 129 aa20.31■□□□□ 0.84
LETMD1-210ENST00000547555 ADCY5O95622 1261 aa20.3■□□□□ 0.84
LETMD1-210ENST00000547555 ZSCAN31Q96LW9 406 aaPredicted RBP20.3■□□□□ 0.84
LETMD1-210ENST00000547555 MTFR1LQ9H019 292 aa20.3■□□□□ 0.84
LETMD1-210ENST00000547555 UBN2Q6ZU65 1347 aa20.3■□□□□ 0.84
LETMD1-210ENST00000547555 TM4SF1P30408 202 aa20.29■□□□□ 0.84
LETMD1-210ENST00000547555 TRIM28Q13263 835 aaKnown RBP20.29■□□□□ 0.84
LETMD1-210ENST00000547555 NFIXQ14938 502 aa20.29■□□□□ 0.84
LETMD1-210ENST00000547555 RNF214Q8ND24 703 aa20.29■□□□□ 0.84
LETMD1-210ENST00000547555 SMARCA5O60264 1052 aaPredicted RBP20.29■□□□□ 0.84
LETMD1-210ENST00000547555 CAVIN2O95810 425 aa20.29■□□□□ 0.84
LETMD1-210ENST00000547555 MSL1Q68DK7 614 aa20.29■□□□□ 0.84
LETMD1-210ENST00000547555 KIAA1524Q8TCG1 905 aa20.29■□□□□ 0.84
LETMD1-210ENST00000547555 MYD88Q99836 296 aa20.29■□□□□ 0.84
LETMD1-210ENST00000547555 FUCA2Q9BTY2 467 aa20.29■□□□□ 0.84
LETMD1-210ENST00000547555 SH2B1Q9NRF2 756 aaPredicted RBP20.29■□□□□ 0.84
LETMD1-210ENST00000547555 CARMIL3Q8ND23 1372 aa20.28■□□□□ 0.84
LETMD1-210ENST00000547555 CTIFO43310 598 aaKnown RBP20.28■□□□□ 0.84
LETMD1-210ENST00000547555 IGKV5-2P06315 115 aa20.28■□□□□ 0.84
LETMD1-210ENST00000547555 BEND3Q5T5X7 828 aa20.28■□□□□ 0.84
LETMD1-210ENST00000547555 LINS1Q8NG48 757 aa20.28■□□□□ 0.84
LETMD1-210ENST00000547555 NIP7Q9Y221 180 aaKnown RBP eCLIP20.28■□□□□ 0.84
LETMD1-210ENST00000547555 RAD50Q92878 1312 aa20.27■□□□□ 0.84
LETMD1-210ENST00000547555 ZBTB7AO95365 584 aa20.27■□□□□ 0.84
LETMD1-210ENST00000547555 ZSCAN20P17040 1043 aaPredicted RBP20.27■□□□□ 0.84
LETMD1-210ENST00000547555 NEXNQ0ZGT2 675 aa20.27■□□□□ 0.84
LETMD1-210ENST00000547555 TM6SF1Q9BZW5 370 aa20.27■□□□□ 0.84
LETMD1-210ENST00000547555 ANO2Q9NQ90 1003 aa20.27■□□□□ 0.84
LETMD1-210ENST00000547555 LIMCH1Q9UPQ0 1083 aa20.27■□□□□ 0.84
LETMD1-210ENST00000547555 GPTP24298 496 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 FAM193AP78312 1265 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 DDR1Q08345 913 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 PARP10Q53GL7 1025 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 NLRP10Q86W26 655 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 ANKRD7Q92527 254 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 NEURL1BA8MQ27 555 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 ATP5J2-PTCD1G3V325 749 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 POLRMTO00411 1230 aaKnown RBP20.26■□□□□ 0.83
LETMD1-210ENST00000547555 STX6O43752 255 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 MMP10P09238 476 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 TTC14Q96N46 770 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 SETDB2Q96T68 719 aa20.26■□□□□ 0.83
LETMD1-210ENST00000547555 ELP1O95163 1332 aa20.25■□□□□ 0.83
LETMD1-210ENST00000547555 SLC4A10Q6U841 1118 aa20.25■□□□□ 0.83
LETMD1-210ENST00000547555 BICDL1Q6ZP65 573 aa20.25■□□□□ 0.83
LETMD1-210ENST00000547555 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.25■□□□□ 0.83
LETMD1-210ENST00000547555 SGIP1Q9BQI5 828 aa20.25■□□□□ 0.83
LETMD1-210ENST00000547555 LAMB2P55268 1798 aa20.25■□□□□ 0.83
LETMD1-210ENST00000547555 ALDH1L1O75891 902 aa20.24■□□□□ 0.83
LETMD1-210ENST00000547555 F13A1P00488 732 aa20.24■□□□□ 0.83
LETMD1-210ENST00000547555 CCDC192P0DO97 292 aa20.24■□□□□ 0.83
LETMD1-210ENST00000547555 CWF19L2Q2TBE0 894 aaKnown RBP20.24■□□□□ 0.83
LETMD1-210ENST00000547555 HSP90AB4PQ58FF6 505 aa20.24■□□□□ 0.83
LETMD1-210ENST00000547555 SUSD4Q5VX71 490 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 ZNF710Q8N1W2 664 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 KCNB2Q92953 911 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 CWC25Q9NXE8 425 aaPredicted RBP20.22■□□□□ 0.83
LETMD1-210ENST00000547555 PALD1Q9ULE6 856 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 ATF5Q9Y2D1 282 aaPredicted RBP20.22■□□□□ 0.83
LETMD1-210ENST00000547555 KIF13BQ9NQT8 1826 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms