RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 RIC3Q7Z5B4 369 aa15.27■□□□□ 0.04
HDAC7-226ENST00000547259 PGAP2Q9UHJ9 254 aa15.27■□□□□ 0.04
HDAC7-226ENST00000547259 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
HDAC7-226ENST00000547259 LAMB2P55268 1798 aa15.26■□□□□ 0.03
HDAC7-226ENST00000547259 PLIN1O60240 522 aa15.26■□□□□ 0.03
HDAC7-226ENST00000547259 HCLS1P14317 486 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-226ENST00000547259 GMPSP49915 693 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-226ENST00000547259 ATF7IPQ6VMQ6 1270 aa15.26■□□□□ 0.03
HDAC7-226ENST00000547259 ANKRD13DQ6ZTN6 518 aa15.26■□□□□ 0.03
HDAC7-226ENST00000547259 CDC37L1Q7L3B6 337 aa15.26■□□□□ 0.03
HDAC7-226ENST00000547259 PLBD2Q8NHP8 589 aa15.26■□□□□ 0.03
HDAC7-226ENST00000547259 ARHGAP45Q92619 1136 aa15.26■□□□□ 0.03
HDAC7-226ENST00000547259 PI4KAP2A4QPH2 592 aa15.25■□□□□ 0.03
HDAC7-226ENST00000547259 CST9Q5W186 159 aa15.25■□□□□ 0.03
HDAC7-226ENST00000547259 KSR2Q6VAB6 950 aa15.25■□□□□ 0.03
HDAC7-226ENST00000547259 PI4KAP1Q8N8J0 262 aa15.25■□□□□ 0.03
HDAC7-226ENST00000547259 DPF2Q92785 391 aa15.25■□□□□ 0.03
HDAC7-226ENST00000547259 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
HDAC7-226ENST00000547259 F6X3S4 739 aa15.24■□□□□ 0.03
HDAC7-226ENST00000547259 CELF2O95319 508 aaKnown RBP15.24■□□□□ 0.03
HDAC7-226ENST00000547259 TRIM27P14373 513 aa15.24■□□□□ 0.03
HDAC7-226ENST00000547259 SAPCD2Q86UD0 394 aa15.24■□□□□ 0.03
HDAC7-226ENST00000547259 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
HDAC7-226ENST00000547259 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
HDAC7-226ENST00000547259 CLUAP1Q96AJ1 413 aa15.24■□□□□ 0.03
HDAC7-226ENST00000547259 CNOT7Q9UIV1 285 aaKnown RBP15.24■□□□□ 0.03
HDAC7-226ENST00000547259 TNNQ9UQP3 1299 aa15.24■□□□□ 0.03
HDAC7-226ENST00000547259 TRAF5O00463 557 aa15.23■□□□□ 0.03
HDAC7-226ENST00000547259 MS4A1P11836 297 aa15.23■□□□□ 0.03
HDAC7-226ENST00000547259 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
HDAC7-226ENST00000547259 WASHC4Q2M389 1173 aa15.23■□□□□ 0.03
HDAC7-226ENST00000547259 CYP4F22Q6NT55 531 aa15.23■□□□□ 0.03
HDAC7-226ENST00000547259 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
HDAC7-226ENST00000547259 EYA3Q99504 573 aa15.23■□□□□ 0.03
HDAC7-226ENST00000547259 THSD7BQ9C0I4 1608 aa15.23■□□□□ 0.03
HDAC7-226ENST00000547259 RAD17O75943 681 aa15.22■□□□□ 0.03
HDAC7-226ENST00000547259 RPS12P25398 132 aaKnown RBP15.22■□□□□ 0.03
HDAC7-226ENST00000547259 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
HDAC7-226ENST00000547259 GRM1Q13255 1194 aa15.22■□□□□ 0.03
HDAC7-226ENST00000547259 TRIM28Q13263 835 aaKnown RBP15.22■□□□□ 0.03
HDAC7-226ENST00000547259 DZIP1LQ8IYY4 767 aaKnown RBP15.22■□□□□ 0.03
HDAC7-226ENST00000547259 MYD88Q99836 296 aa15.22■□□□□ 0.03
HDAC7-226ENST00000547259 ABHD8Q96I13 439 aa15.21■□□□□ 0.03
HDAC7-226ENST00000547259 ISCA1Q9BUE6 129 aa15.21■□□□□ 0.03
HDAC7-226ENST00000547259 METTL22Q9BUU2 404 aaPredicted RBP15.21■□□□□ 0.03
HDAC7-226ENST00000547259 NSFL1CQ9UNZ2 370 aaKnown RBP15.21■□□□□ 0.03
HDAC7-226ENST00000547259 TAF1P21675 1872 aa15.2■□□□□ 0.02
HDAC7-226ENST00000547259 C6orf229H3BNL8 230 aa15.2■□□□□ 0.02
HDAC7-226ENST00000547259 NOGQ13253 232 aa15.2■□□□□ 0.02
HDAC7-226ENST00000547259 PANK1Q8TE04 598 aa15.2■□□□□ 0.02
HDAC7-226ENST00000547259 GLIS2Q9BZE0 524 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-226ENST00000547259 POLR2AP24928 1970 aaKnown RBP15.2■□□□□ 0.02
HDAC7-226ENST00000547259 LRRC37AA6NMS7 1700 aa15.2■□□□□ 0.02
HDAC7-226ENST00000547259 CCT4P50991 539 aaKnown RBP15.19■□□□□ 0.02
HDAC7-226ENST00000547259 FMR1Q06787 632 aaKnown RBP eCLIP15.19■□□□□ 0.02
HDAC7-226ENST00000547259 PDE3AQ14432 1141 aa15.19■□□□□ 0.02
HDAC7-226ENST00000547259 MICALL2Q8IY33 904 aa15.19■□□□□ 0.02
HDAC7-226ENST00000547259 FAM89AQ96GI7 184 aa15.19■□□□□ 0.02
HDAC7-226ENST00000547259 DDX60Q8IY21 1712 aaKnown RBP15.18■□□□□ 0.02
HDAC7-226ENST00000547259 ATP5J2-PTCD1G3V325 749 aa15.18■□□□□ 0.02
HDAC7-226ENST00000547259 G3V3G9 751 aa15.18■□□□□ 0.02
HDAC7-226ENST00000547259 IRS4O14654 1257 aaPredicted RBP15.18■□□□□ 0.02
HDAC7-226ENST00000547259 RLBP1P12271 317 aa15.18■□□□□ 0.02
HDAC7-226ENST00000547259 RPS8P62241 208 aaKnown RBP15.18■□□□□ 0.02
HDAC7-226ENST00000547259 BEND3Q5T5X7 828 aa15.18■□□□□ 0.02
HDAC7-226ENST00000547259 DCAF8Q5TAQ9 597 aa15.18■□□□□ 0.02
HDAC7-226ENST00000547259 C20orf194Q5TEA3 1177 aa15.18■□□□□ 0.02
HDAC7-226ENST00000547259 TMEM57Q8N5G2 664 aa15.18■□□□□ 0.02
HDAC7-226ENST00000547259 ZC3H12CQ9C0D7 883 aaKnown RBP15.18■□□□□ 0.02
HDAC7-226ENST00000547259 SRCIN1Q9C0H9 1055 aa15.18■□□□□ 0.02
HDAC7-226ENST00000547259 ZNF408Q9H9D4 720 aa15.18■□□□□ 0.02
HDAC7-226ENST00000547259 YDJCA8MPS7 323 aa15.17■□□□□ 0.02
HDAC7-226ENST00000547259 HIRAP54198 1017 aaPredicted RBP15.17■□□□□ 0.02
HDAC7-226ENST00000547259 CWF19L2Q2TBE0 894 aaKnown RBP15.17■□□□□ 0.02
HDAC7-226ENST00000547259 INTS3Q68E01 1043 aaKnown RBP15.17■□□□□ 0.02
HDAC7-226ENST00000547259 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
HDAC7-226ENST00000547259 C2orf69Q8N8R5 385 aa15.17■□□□□ 0.02
HDAC7-226ENST00000547259 LINS1Q8NG48 757 aa15.17■□□□□ 0.02
HDAC7-226ENST00000547259 CCDC102AQ96A19 550 aa15.17■□□□□ 0.02
HDAC7-226ENST00000547259 DCPSQ96C86 337 aaKnown RBP15.17■□□□□ 0.02
HDAC7-226ENST00000547259 NEURL1BA8MQ27 555 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 PSMD14O00487 310 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 AOC2O75106 756 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 ALDH1L1O75891 902 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 HUNKP57058 714 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 SLC51AQ86UW1 340 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
HDAC7-226ENST00000547259 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 TRPM4Q8TD43 1214 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 CELF1Q92879 486 aaKnown RBP15.16■□□□□ 0.02
HDAC7-226ENST00000547259 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 COG6Q9Y2V7 657 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 CASP8AP2Q9UKL3 1982 aa15.16■□□□□ 0.02
HDAC7-226ENST00000547259 RIMBP2O15034 1052 aa15.15■□□□□ 0.02
HDAC7-226ENST00000547259 NEFLP07196 543 aa15.15■□□□□ 0.02
HDAC7-226ENST00000547259 IRX6P78412 446 aaPredicted RBP15.15■□□□□ 0.02
HDAC7-226ENST00000547259 MVPQ14764 893 aaKnown RBP15.15■□□□□ 0.02
HDAC7-226ENST00000547259 CCDC152Q4G0S7 254 aa15.15■□□□□ 0.02
HDAC7-226ENST00000547259 KRT26Q7Z3Y9 468 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms