RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 IFT57Q9NWB7 429 aa14.84□□□□□ -0.03
RAB5C-203ENST00000546881 ANKIB1Q9P2G1 1089 aa14.84□□□□□ -0.03
RAB5C-203ENST00000546881 CALD1Q05682 793 aaKnown RBP14.83□□□□□ -0.04
RAB5C-203ENST00000546881 TRIM28Q13263 835 aaKnown RBP14.83□□□□□ -0.04
RAB5C-203ENST00000546881 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.04
RAB5C-203ENST00000546881 TBC1D16Q8TBP0 767 aa14.83□□□□□ -0.04
RAB5C-203ENST00000546881 DPF2Q92785 391 aa14.83□□□□□ -0.04
RAB5C-203ENST00000546881 ZC3H12CQ9C0D7 883 aaKnown RBP14.83□□□□□ -0.04
RAB5C-203ENST00000546881 PRKRIP1Q9H875 184 aaPredicted RBP14.83□□□□□ -0.04
RAB5C-203ENST00000546881 UFL1O94874 794 aa14.82□□□□□ -0.04
RAB5C-203ENST00000546881 ZNF853P0CG23 659 aa14.82□□□□□ -0.04
RAB5C-203ENST00000546881 HSP90B1P14625 803 aaKnown RBP14.82□□□□□ -0.04
RAB5C-203ENST00000546881 HUNKP57058 714 aa14.82□□□□□ -0.04
RAB5C-203ENST00000546881 KRT26Q7Z3Y9 468 aa14.82□□□□□ -0.04
RAB5C-203ENST00000546881 ADM5C9JUS6 153 aa14.81□□□□□ -0.04
RAB5C-203ENST00000546881 EGFRP00533 1210 aa14.81□□□□□ -0.04
RAB5C-203ENST00000546881 RPS12P25398 132 aaKnown RBP14.81□□□□□ -0.04
RAB5C-203ENST00000546881 CCDC152Q4G0S7 254 aa14.81□□□□□ -0.04
RAB5C-203ENST00000546881 C8orf58Q8NAV2 365 aa14.81□□□□□ -0.04
RAB5C-203ENST00000546881 DCPSQ96C86 337 aaKnown RBP14.81□□□□□ -0.04
RAB5C-203ENST00000546881 CWC25Q9NXE8 425 aaPredicted RBP14.81□□□□□ -0.04
RAB5C-203ENST00000546881 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
RAB5C-203ENST00000546881 RTL9Q8NET4 1388 aa14.81□□□□□ -0.04
RAB5C-203ENST00000546881 CCDC85CA6NKD9 419 aa14.8□□□□□ -0.04
RAB5C-203ENST00000546881 DDX58O95786 925 aaKnown RBP14.8□□□□□ -0.04
RAB5C-203ENST00000546881 CCDC191Q8NCU4 936 aa14.8□□□□□ -0.04
RAB5C-203ENST00000546881 HHIPL1Q96JK4 782 aa14.8□□□□□ -0.04
RAB5C-203ENST00000546881 PDE8AO60658 829 aa14.79□□□□□ -0.04
RAB5C-203ENST00000546881 PCCAP05165 728 aaPredicted RBP14.79□□□□□ -0.04
RAB5C-203ENST00000546881 BRPF1P55201 1214 aaPredicted RBP14.79□□□□□ -0.04
RAB5C-203ENST00000546881 KIF4BQ2VIQ3 1234 aa14.79□□□□□ -0.04
RAB5C-203ENST00000546881 CCDC30Q5VVM6 783 aa14.79□□□□□ -0.04
RAB5C-203ENST00000546881 CA12O43570 354 aa14.78□□□□□ -0.04
RAB5C-203ENST00000546881 NOGQ13253 232 aa14.78□□□□□ -0.04
RAB5C-203ENST00000546881 ANKRD18AQ8IVF6 992 aa14.78□□□□□ -0.04
RAB5C-203ENST00000546881 C2orf69Q8N8R5 385 aa14.78□□□□□ -0.04
RAB5C-203ENST00000546881 ZIC5Q96T25 663 aa14.78□□□□□ -0.04
RAB5C-203ENST00000546881 METTL22Q9BUU2 404 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-203ENST00000546881 GBA2Q9HCG7 927 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-203ENST00000546881 GGA3Q9NZ52 723 aa14.78□□□□□ -0.04
RAB5C-203ENST00000546881 PODXL2Q9NZ53 605 aa14.78□□□□□ -0.04
RAB5C-203ENST00000546881 MAP3K2Q9Y2U5 619 aa14.78□□□□□ -0.04
RAB5C-203ENST00000546881 ZNF316A6NFI3 1004 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-203ENST00000546881 VIL1P09327 827 aaKnown RBP14.77□□□□□ -0.05
RAB5C-203ENST00000546881 SULF1Q8IWU6 871 aa14.77□□□□□ -0.05
RAB5C-203ENST00000546881 ASTN2O75129 1339 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-203ENST00000546881 XDHP47989 1333 aa14.76□□□□□ -0.05
RAB5C-203ENST00000546881 RGMBQ6NW40 437 aa14.76□□□□□ -0.05
RAB5C-203ENST00000546881 TSPYL6Q8N831 410 aa14.76□□□□□ -0.05
RAB5C-203ENST00000546881 TSR2Q969E8 191 aaKnown RBP14.76□□□□□ -0.05
RAB5C-203ENST00000546881 CHMP4AQ9BY43 222 aa14.76□□□□□ -0.05
RAB5C-203ENST00000546881 SCN9AQ15858 1988 aa14.76□□□□□ -0.05
RAB5C-203ENST00000546881 PI4KAP2A4QPH2 592 aa14.75□□□□□ -0.05
RAB5C-203ENST00000546881 ZNF157P51786 506 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-203ENST00000546881 CTSWP56202 376 aa14.75□□□□□ -0.05
RAB5C-203ENST00000546881 NEXNQ0ZGT2 675 aa14.75□□□□□ -0.05
RAB5C-203ENST00000546881 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
RAB5C-203ENST00000546881 RSBN1LQ6PCB5 846 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-203ENST00000546881 PI4KAP1Q8N8J0 262 aa14.75□□□□□ -0.05
RAB5C-203ENST00000546881 STK31Q9BXU1 1019 aa14.75□□□□□ -0.05
RAB5C-203ENST00000546881 ATP2B4P23634 1241 aa14.74□□□□□ -0.05
RAB5C-203ENST00000546881 SCARF1Q14162 830 aa14.74□□□□□ -0.05
RAB5C-203ENST00000546881 ANGEL2Q5VTE6 544 aaKnown RBP14.74□□□□□ -0.05
RAB5C-203ENST00000546881 KSR2Q6VAB6 950 aa14.74□□□□□ -0.05
RAB5C-203ENST00000546881 FBXW7Q969H0 707 aa14.74□□□□□ -0.05
RAB5C-203ENST00000546881 CDCA5Q96FF9 252 aa14.74□□□□□ -0.05
RAB5C-203ENST00000546881 CDC5LQ99459 802 aaKnown RBP14.74□□□□□ -0.05
RAB5C-203ENST00000546881 MCOLN1Q9GZU1 580 aa14.74□□□□□ -0.05
RAB5C-203ENST00000546881 POLR2AP24928 1970 aaKnown RBP14.74□□□□□ -0.05
RAB5C-203ENST00000546881 IGKV5-2P06315 115 aa14.73□□□□□ -0.05
RAB5C-203ENST00000546881 KIF23Q02241 960 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-203ENST00000546881 DGKZQ13574 1117 aa14.73□□□□□ -0.05
RAB5C-203ENST00000546881 CWF19L2Q2TBE0 894 aaKnown RBP14.73□□□□□ -0.05
RAB5C-203ENST00000546881 AGBL3Q8NEM8 1001 aa14.73□□□□□ -0.05
RAB5C-203ENST00000546881 CCDC102AQ96A19 550 aa14.73□□□□□ -0.05
RAB5C-203ENST00000546881 SPEF2Q9C093 1822 aa14.73□□□□□ -0.05
RAB5C-203ENST00000546881 CASP8AP2Q9UKL3 1982 aa14.73□□□□□ -0.05
RAB5C-203ENST00000546881 USP17L3A6NCW0 530 aa14.72□□□□□ -0.05
RAB5C-203ENST00000546881 USP17L4A6NCW7 530 aa14.72□□□□□ -0.05
RAB5C-203ENST00000546881 WTIPA6NIX2 430 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-203ENST00000546881 FAM155AB1AL88 458 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-203ENST00000546881 USP17L8P0C7I0 530 aa14.72□□□□□ -0.05
RAB5C-203ENST00000546881 ZNF280AP59817 542 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-203ENST00000546881 USP17L1Q7RTZ2 530 aa14.72□□□□□ -0.05
RAB5C-203ENST00000546881 GREM2Q9H772 168 aa14.72□□□□□ -0.05
RAB5C-203ENST00000546881 MYOZ2Q9NPC6 264 aa14.72□□□□□ -0.05
RAB5C-203ENST00000546881 SCAF8Q9UPN6 1271 aaKnown RBP14.72□□□□□ -0.05
RAB5C-203ENST00000546881 TWISTNBQ3B726 338 aaPredicted RBP14.71□□□□□ -0.05
RAB5C-203ENST00000546881 UBE3BQ7Z3V4 1068 aa14.71□□□□□ -0.05
RAB5C-203ENST00000546881 PODNQ7Z5L7 613 aa14.71□□□□□ -0.05
RAB5C-203ENST00000546881 TTLL11Q8NHH1 800 aa14.71□□□□□ -0.05
RAB5C-203ENST00000546881 MINPP1Q9UNW1 487 aa14.71□□□□□ -0.05
RAB5C-203ENST00000546881 NEURL1BA8MQ27 555 aa14.7□□□□□ -0.06
RAB5C-203ENST00000546881 TRPA1O75762 1119 aa14.7□□□□□ -0.06
RAB5C-203ENST00000546881 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
RAB5C-203ENST00000546881 MLLT1Q03111 559 aaPredicted RBP14.7□□□□□ -0.06
RAB5C-203ENST00000546881 CCDC184Q52MB2 194 aa14.7□□□□□ -0.06
RAB5C-203ENST00000546881 G2E3Q7L622 706 aa14.7□□□□□ -0.06
RAB5C-203ENST00000546881 MXD3Q9BW11 206 aa14.7□□□□□ -0.06
RAB5C-203ENST00000546881 BSDC1Q9NW68 430 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms