RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PLIN1O60240 522 aa18.11■□□□□ 0.49
DDX54-203ENST00000546869 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
DDX54-203ENST00000546869 MVPQ14764 893 aaKnown RBP18.11■□□□□ 0.49
DDX54-203ENST00000546869 LDHAL6AQ6ZMR3 332 aa18.11■□□□□ 0.49
DDX54-203ENST00000546869 TBC1D16Q8TBP0 767 aa18.11■□□□□ 0.49
DDX54-203ENST00000546869 CHMP4BQ9H444 224 aaKnown RBP18.11■□□□□ 0.49
DDX54-203ENST00000546869 ANKIB1Q9P2G1 1089 aa18.11■□□□□ 0.49
DDX54-203ENST00000546869 POLLQ9UGP5 575 aa18.11■□□□□ 0.49
DDX54-203ENST00000546869 FBXO3Q9UK99 471 aa18.11■□□□□ 0.49
DDX54-203ENST00000546869 SBF1O95248 1867 aa18.11■□□□□ 0.49
DDX54-203ENST00000546869 ATP2B4P23634 1241 aa18.1■□□□□ 0.49
DDX54-203ENST00000546869 RFX5P48382 616 aaPredicted RBP18.1■□□□□ 0.49
DDX54-203ENST00000546869 EYA3Q99504 573 aa18.1■□□□□ 0.49
DDX54-203ENST00000546869 DDX19BQ9UMR2 479 aa18.1■□□□□ 0.49
DDX54-203ENST00000546869 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
DDX54-203ENST00000546869 FZD9O00144 591 aa18.09■□□□□ 0.49
DDX54-203ENST00000546869 TAF7LQ5H9L4 462 aa18.09■□□□□ 0.49
DDX54-203ENST00000546869 JDP2Q8WYK2 163 aa18.09■□□□□ 0.49
DDX54-203ENST00000546869 ZNF594Q96JF6 807 aaPredicted RBP18.09■□□□□ 0.49
DDX54-203ENST00000546869 GGA1Q9UJY5 639 aa18.09■□□□□ 0.49
DDX54-203ENST00000546869 CHRNDQ07001 517 aa18.08■□□□□ 0.48
DDX54-203ENST00000546869 WASHC4Q2M389 1173 aa18.08■□□□□ 0.48
DDX54-203ENST00000546869 RIPOR2Q9Y4F9 1068 aa18.08■□□□□ 0.48
DDX54-203ENST00000546869 LTBP1Q14766 1721 aa18.07■□□□□ 0.48
DDX54-203ENST00000546869 C6orf229H3BNL8 230 aa18.07■□□□□ 0.48
DDX54-203ENST00000546869 PPIP5K2O43314 1243 aa18.07■□□□□ 0.48
DDX54-203ENST00000546869 PTPN12Q05209 780 aaKnown RBP18.07■□□□□ 0.48
DDX54-203ENST00000546869 LARGE2Q8N3Y3 721 aa18.07■□□□□ 0.48
DDX54-203ENST00000546869 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
DDX54-203ENST00000546869 DUOX1Q9NRD9 1551 aa18.07■□□□□ 0.48
DDX54-203ENST00000546869 MROH5Q6ZUA9 1318 aa18.06■□□□□ 0.48
DDX54-203ENST00000546869 GLTPD2A6NH11 291 aa18.06■□□□□ 0.48
DDX54-203ENST00000546869 RRP1P56182 461 aaKnown RBP18.06■□□□□ 0.48
DDX54-203ENST00000546869 AOC3Q16853 763 aa18.06■□□□□ 0.48
DDX54-203ENST00000546869 DPY19L2Q6NUT2 758 aa18.06■□□□□ 0.48
DDX54-203ENST00000546869 ZC3H12CQ9C0D7 883 aaKnown RBP18.06■□□□□ 0.48
DDX54-203ENST00000546869 CNNM1Q9NRU3 951 aa18.06■□□□□ 0.48
DDX54-203ENST00000546869 COG6Q9Y2V7 657 aa18.06■□□□□ 0.48
DDX54-203ENST00000546869 CIAO1O76071 339 aa18.05■□□□□ 0.48
DDX54-203ENST00000546869 UFL1O94874 794 aa18.05■□□□□ 0.48
DDX54-203ENST00000546869 ATP8B2P98198 1209 aa18.05■□□□□ 0.48
DDX54-203ENST00000546869 C20orf194Q5TEA3 1177 aa18.05■□□□□ 0.48
DDX54-203ENST00000546869 C15orf52Q6ZUT6 534 aaKnown RBP18.05■□□□□ 0.48
DDX54-203ENST00000546869 ZNF784Q8NCA9 323 aaPredicted RBP18.05■□□□□ 0.48
DDX54-203ENST00000546869 PUS3Q9BZE2 481 aaKnown RBP18.05■□□□□ 0.48
DDX54-203ENST00000546869 ZBTB40Q9NUA8 1239 aa18.05■□□□□ 0.48
DDX54-203ENST00000546869 DICER1Q9UPY3 1922 aaKnown RBP18.05■□□□□ 0.48
DDX54-203ENST00000546869 ZNF804BA4D1E1 1349 aa18.04■□□□□ 0.48
DDX54-203ENST00000546869 EYA2O00167 538 aa18.04■□□□□ 0.48
DDX54-203ENST00000546869 SRGAP3O43295 1099 aa18.04■□□□□ 0.48
DDX54-203ENST00000546869 NIM1KQ8IY84 436 aa18.04■□□□□ 0.48
DDX54-203ENST00000546869 ZNRF3Q9ULT6 936 aa18.04■□□□□ 0.48
DDX54-203ENST00000546869 MED23Q9ULK4 1368 aa18.04■□□□□ 0.48
DDX54-203ENST00000546869 UBE4AQ14139 1066 aa18.03■□□□□ 0.48
DDX54-203ENST00000546869 POLA2Q14181 598 aa18.03■□□□□ 0.48
DDX54-203ENST00000546869 LRRC24Q50LG9 513 aa18.03■□□□□ 0.48
DDX54-203ENST00000546869 SSH3Q8TE77 659 aa18.03■□□□□ 0.48
DDX54-203ENST00000546869 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.48
DDX54-203ENST00000546869 EIF6P56537 245 aaKnown RBP18.02■□□□□ 0.48
DDX54-203ENST00000546869 ATG9AQ7Z3C6 839 aa18.02■□□□□ 0.48
DDX54-203ENST00000546869 RPAP2Q8IXW5 612 aaPredicted RBP18.02■□□□□ 0.48
DDX54-203ENST00000546869 KLHDC4Q8TBB5 520 aa18.02■□□□□ 0.48
DDX54-203ENST00000546869 IRS2Q9Y4H2 1338 aa18.01■□□□□ 0.47
DDX54-203ENST00000546869 CCDC88AQ3V6T2 1871 aa18.01■□□□□ 0.47
DDX54-203ENST00000546869 PNMA6EA0A0J9YXQ4 647 aa18.01■□□□□ 0.47
DDX54-203ENST00000546869 WTIPA6NIX2 430 aaPredicted RBP18.01■□□□□ 0.47
DDX54-203ENST00000546869 TAF5LO75529 589 aa18.01■□□□□ 0.47
DDX54-203ENST00000546869 PDE8BO95263 885 aa18.01■□□□□ 0.47
DDX54-203ENST00000546869 IL15P40933 162 aaPredicted RBP18.01■□□□□ 0.47
DDX54-203ENST00000546869 PODNQ7Z5L7 613 aa18.01■□□□□ 0.47
DDX54-203ENST00000546869 GPC2Q8N158 579 aa18.01■□□□□ 0.47
DDX54-203ENST00000546869 VGLL2Q8N8G2 317 aa18.01■□□□□ 0.47
DDX54-203ENST00000546869 COL4A5P29400 1685 aa18.01■□□□□ 0.47
DDX54-203ENST00000546869 RIMBP2O15034 1052 aa18■□□□□ 0.47
DDX54-203ENST00000546869 KCNJ4P48050 445 aa18■□□□□ 0.47
DDX54-203ENST00000546869 CEP85Q6P2H3 762 aa18■□□□□ 0.47
DDX54-203ENST00000546869 HELBQ8NG08 1087 aaPredicted RBP18■□□□□ 0.47
DDX54-203ENST00000546869 L3MBTL3Q96JM7 780 aaPredicted RBP18■□□□□ 0.47
DDX54-203ENST00000546869 COA1Q9GZY4 146 aa18■□□□□ 0.47
DDX54-203ENST00000546869 METTL24Q5JXM2 366 aa17.99■□□□□ 0.47
DDX54-203ENST00000546869 GPBP1L1Q9HC44 474 aaPredicted RBP17.99■□□□□ 0.47
DDX54-203ENST00000546869 TIAM2Q8IVF5 1701 aa17.98■□□□□ 0.47
DDX54-203ENST00000546869 YDJCA8MPS7 323 aa17.98■□□□□ 0.47
DDX54-203ENST00000546869 ECE2O60344 883 aa17.98■□□□□ 0.47
DDX54-203ENST00000546869 CXCL9Q07325 125 aa17.98■□□□□ 0.47
DDX54-203ENST00000546869 TNIP1Q15025 636 aa17.98■□□□□ 0.47
DDX54-203ENST00000546869 TXNRD3Q86VQ6 643 aa17.98■□□□□ 0.47
DDX54-203ENST00000546869 GPR101Q96P66 508 aaPredicted RBP17.98■□□□□ 0.47
DDX54-203ENST00000546869 C1orf115Q9H7X2 142 aa17.98■□□□□ 0.47
DDX54-203ENST00000546869 CEP126Q9P2H0 1117 aa17.98■□□□□ 0.47
DDX54-203ENST00000546869 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
DDX54-203ENST00000546869 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
DDX54-203ENST00000546869 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
DDX54-203ENST00000546869 DDNO94850 711 aaPredicted RBP17.97■□□□□ 0.47
DDX54-203ENST00000546869 FGFR2P21802 821 aa17.97■□□□□ 0.47
DDX54-203ENST00000546869 DOK7Q18PE1 504 aa17.97■□□□□ 0.47
DDX54-203ENST00000546869 CIAPIN1Q6FI81 312 aa17.97■□□□□ 0.47
DDX54-203ENST00000546869 DBNDD1Q9H9R9 158 aa17.97■□□□□ 0.47
DDX54-203ENST00000546869 SPEF2Q9C093 1822 aa17.97■□□□□ 0.47
DDX54-203ENST00000546869 G3V3G9 751 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms