RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TRIM14Q14142 442 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 FBF1Q8TES7 1133 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 CCDC113Q9H0I3 377 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 DEPDC5O75140 1603 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 ERVK-7P63135 1459 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 DESP17661 470 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 CCDC178Q5BJE1 867 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 CEP57Q86XR8 500 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 GPR161Q8N6U8 529 aaKnown RBP14.61□□□□□ -0.07
PTCH1-212ENST00000546744 LMBRD1Q9NUN5 540 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 BRAPQ7Z569 592 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 ANKLE2Q86XL3 938 aa14.61□□□□□ -0.07
PTCH1-212ENST00000546744 ORC3Q9UBD5 711 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-212ENST00000546744 CTDP1Q9Y5B0 961 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-212ENST00000546744 DNM1Q05193 864 aaKnown RBP14.6□□□□□ -0.07
PTCH1-212ENST00000546744 TTF2Q9UNY4 1162 aaKnown RBP14.6□□□□□ -0.07
PTCH1-212ENST00000546744 TRPM1Q7Z4N2 1603 aa14.6□□□□□ -0.07
PTCH1-212ENST00000546744 FRMPD1Q5SYB0 1578 aa14.6□□□□□ -0.07
PTCH1-212ENST00000546744 TDRD12Q587J7 1177 aaKnown RBP14.6□□□□□ -0.07
PTCH1-212ENST00000546744 BCCIPQ9P287 314 aaKnown RBP eCLIP14.6□□□□□ -0.07
PTCH1-212ENST00000546744 TTC41PQ6P2S7 1318 aa14.6□□□□□ -0.07
PTCH1-212ENST00000546744 AKR1B10O60218 316 aa14.6□□□□□ -0.07
PTCH1-212ENST00000546744 CCDC172P0C7W6 258 aa14.6□□□□□ -0.07
PTCH1-212ENST00000546744 LACTBP83111 547 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-212ENST00000546744 KIF5AQ12840 1032 aa14.6□□□□□ -0.07
PTCH1-212ENST00000546744 CCDC6Q16204 474 aa14.6□□□□□ -0.07
PTCH1-212ENST00000546744 GOLGA5Q8TBA6 731 aa14.6□□□□□ -0.07
PTCH1-212ENST00000546744 SOS1Q07889 1333 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-212ENST00000546744 ARHGAP6O43182 974 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 MTIF2P46199 727 aaKnown RBP14.59□□□□□ -0.07
PTCH1-212ENST00000546744 ZNF75DP51815 510 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 PPFIA1Q13136 1202 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 WDR66Q8TBY9 1149 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 GTF3C6Q969F1 213 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 CCDC77Q9BR77 488 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 SIL1Q9H173 461 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 CEP83Q9Y592 693 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 GSTTP1A0A1W2PQM5 241 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 GNAT3A8MTJ3 354 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 PSME1Q06323 249 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 SSRP1Q08945 709 aaKnown RBP14.59□□□□□ -0.07
PTCH1-212ENST00000546744 NUTM2AQ8IVF1 878 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-212ENST00000546744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTCH1-212ENST00000546744 CAMSAP1Q5T5Y3 1602 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 PPFIA3O75145 1194 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 MYL5Q02045 173 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 CFAP58Q5T655 872 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 NUP133Q8WUM0 1156 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 CPLX3Q8WVH0 158 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 ZSWIM4Q9H7M6 989 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 SWAP70Q9UH65 585 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 AOX1Q06278 1338 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 RTL1A6NKG5 1358 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 VWDEQ8N2E2 1590 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 GOLGA8BA8MQT2 603 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 TSGA10Q9BZW7 698 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 RASAL2Q9UJF2 1139 aa14.59□□□□□ -0.07
PTCH1-212ENST00000546744 PIK3R4Q99570 1358 aa14.58□□□□□ -0.07
PTCH1-212ENST00000546744 IARSP41252 1262 aaKnown RBP14.58□□□□□ -0.07
PTCH1-212ENST00000546744 KIF6Q6ZMV9 814 aa14.58□□□□□ -0.07
PTCH1-212ENST00000546744 BIN1O00499 593 aa14.58□□□□□ -0.08
PTCH1-212ENST00000546744 PPP1R2P41236 205 aa14.58□□□□□ -0.08
PTCH1-212ENST00000546744 MAP3K9P80192 1104 aa14.58□□□□□ -0.08
PTCH1-212ENST00000546744 LMNTD2Q8IXW0 634 aa14.58□□□□□ -0.08
PTCH1-212ENST00000546744 GIGYF1O75420 1035 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-212ENST00000546744 FAM160A1Q05DH4 1040 aa14.58□□□□□ -0.08
PTCH1-212ENST00000546744 LMBR1Q8WVP7 490 aa14.58□□□□□ -0.08
PTCH1-212ENST00000546744 ZNF287Q9HBT7 754 aa14.58□□□□□ -0.08
PTCH1-212ENST00000546744 NDUFAB1O14561 156 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 CNNM1Q9NRU3 951 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 ZNF213O14771 459 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 CLSTN2Q9H4D0 955 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 MED4Q9NPJ6 270 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 SAMD15Q9P1V8 674 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTCH1-212ENST00000546744 USP16Q9Y5T5 823 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 KIF4AO95239 1232 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 SEC24BO95487 1268 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 CPLX4Q7Z7G2 160 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 BAG1Q99933 345 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-212ENST00000546744 HYPKQ9NX55 129 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 YTHDC2Q9H6S0 1430 aaKnown RBP14.57□□□□□ -0.08
PTCH1-212ENST00000546744 PER1O15534 1290 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-212ENST00000546744 IGSF3O75054 1194 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 CHMP4BP1P59074 171 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 HOOK3Q86VS8 718 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 PPFIBP2Q8ND30 876 aa14.57□□□□□ -0.08
PTCH1-212ENST00000546744 RICTORQ6R327 1708 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 TTC21BQ7Z4L5 1316 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 ZFYP08048 801 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-212ENST00000546744 TRIM21P19474 475 aaKnown RBP14.56□□□□□ -0.08
PTCH1-212ENST00000546744 TNNC1P63316 161 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 FLIIQ13045 1269 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 TAF7Q15545 349 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-212ENST00000546744 KIAA0753Q2KHM9 967 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 DDX46Q7L014 1031 aaKnown RBP14.56□□□□□ -0.08
PTCH1-212ENST00000546744 AIDAQ96BJ3 306 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 STIM2Q9P246 746 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 SLC12A7Q9Y666 1083 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 A0A087WZG4 1122 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms