RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 GFRA3O60609 400 aa9.67□□□□□ -0.86
TSPAN8-203ENST00000546561 HSP90B1P14625 803 aaKnown RBP9.67□□□□□ -0.86
TSPAN8-203ENST00000546561 NUCB1Q02818 461 aa9.67□□□□□ -0.86
TSPAN8-203ENST00000546561 MTX1Q13505 466 aa9.67□□□□□ -0.86
TSPAN8-203ENST00000546561 MFSD10Q14728 455 aa9.67□□□□□ -0.86
TSPAN8-203ENST00000546561 UBE3BQ7Z3V4 1068 aa9.67□□□□□ -0.86
TSPAN8-203ENST00000546561 SIRT2Q8IXJ6 389 aa9.67□□□□□ -0.86
TSPAN8-203ENST00000546561 RTCBQ9Y3I0 505 aaKnown RBP9.67□□□□□ -0.86
TSPAN8-203ENST00000546561 COL24A1Q17RW2 1714 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 GNPATO15228 680 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 RAB11FIP3O75154 756 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 RPS6KA4O75676 772 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 RGS3P49796 1198 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 PARP10Q53GL7 1025 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 ANKRD45Q5TZF3 282 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 POTEAQ6S8J7 498 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 CLEC4GQ6UXB4 293 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 PTF1AQ7RTS3 328 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 PPP1R42Q7Z4L9 355 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 CHD1LQ86WJ1 897 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 SSH3Q8TE77 659 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 SUCLG2Q96I99 432 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 TBC1D2BQ9UPU7 963 aa9.66□□□□□ -0.86
TSPAN8-203ENST00000546561 CDHR2Q9BYE9 1310 aa9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 PNMA6EA0A0J9YXQ4 647 aa9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 H7C1W4 665 aa9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 PLSCR1O15162 318 aa9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 ZPR1O75312 459 aa9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 CAMTA2O94983 1202 aa9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 PCCAP05165 728 aaPredicted RBP9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 OS9Q13438 667 aaPredicted RBP9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 ERC1Q8IUD2 1116 aa9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 PTCD2Q8WV60 388 aaKnown RBP9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 RGS17Q9UGC6 210 aaPredicted RBP9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 EP400Q96L91 3159 aa9.65□□□□□ -0.86
TSPAN8-203ENST00000546561 CASZ1Q86V15 1759 aa9.65□□□□□ -0.87
TSPAN8-203ENST00000546561 BHMG1C9JSJ3 638 aaPredicted RBP9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 HLFQ16534 295 aa9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 ZNF787Q6DD87 383 aa9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 NLRP10Q86W26 655 aa9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 ZBTB38Q8NAP3 1195 aaPredicted RBP9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 LRRCC1Q9C099 1032 aa9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 LNPKQ9C0E8 428 aa9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 NARFQ9UHQ1 456 aa9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 QSER1Q2KHR3 1735 aa9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 DDX60Q8IY21 1712 aaKnown RBP9.64□□□□□ -0.87
TSPAN8-203ENST00000546561 TUBGCP6Q96RT7 1819 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 AK9Q5TCS8 1911 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 SURF6O75683 361 aaKnown RBP9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 APBA3O96018 575 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 GPTP24298 496 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 SSFA2P28290 1259 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 RFC4P35249 363 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 CASP7P55210 303 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 SF3B2Q13435 895 aaKnown RBP9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 TXNRD1Q16881 649 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 RABL6Q3YEC7 729 aaPredicted RBP9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 TRAPPC3LQ5T215 181 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 ZNF34Q8IZ26 560 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 KIF1BPQ96EK5 621 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 PLA2G12BQ9BX93 195 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 TRMT112Q9UI30 125 aaKnown RBP9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 EXOC6BQ9Y2D4 811 aa9.63□□□□□ -0.87
TSPAN8-203ENST00000546561 KCNQ4P56696 695 aa9.62□□□□□ -0.87
TSPAN8-203ENST00000546561 G3BP1Q13283 466 aaKnown RBP eCLIP9.62□□□□□ -0.87
TSPAN8-203ENST00000546561 UTP14AQ9BVJ6 771 aaKnown RBP9.62□□□□□ -0.87
TSPAN8-203ENST00000546561 NYXQ9GZU5 481 aa9.62□□□□□ -0.87
TSPAN8-203ENST00000546561 NIP7Q9Y221 180 aaKnown RBP eCLIP9.62□□□□□ -0.87
TSPAN8-203ENST00000546561 NOP58Q9Y2X3 529 aaKnown RBP9.62□□□□□ -0.87
TSPAN8-203ENST00000546561 CHMP3Q9Y3E7 222 aa9.62□□□□□ -0.87
TSPAN8-203ENST00000546561 SH3TC1Q8TE82 1336 aa9.61□□□□□ -0.87
TSPAN8-203ENST00000546561 USP42Q9H9J4 1324 aaKnown RBP9.61□□□□□ -0.87
TSPAN8-203ENST00000546561 APBB1O00213 710 aa9.61□□□□□ -0.87
TSPAN8-203ENST00000546561 PDE8AO60658 829 aa9.61□□□□□ -0.87
TSPAN8-203ENST00000546561 LMBR1LQ6UX01 489 aa9.61□□□□□ -0.87
TSPAN8-203ENST00000546561 FLAD1Q8NFF5 587 aa9.61□□□□□ -0.87
TSPAN8-203ENST00000546561 KAZALD1Q96I82 304 aa9.61□□□□□ -0.87
TSPAN8-203ENST00000546561 LRRC4BQ9NT99 713 aa9.61□□□□□ -0.87
TSPAN8-203ENST00000546561 UBN2Q6ZU65 1347 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 IRS4O14654 1257 aaPredicted RBP9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 PHF14O94880 888 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 BAG6P46379 1132 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 FOXO4P98177 505 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 CCDC57Q2TAC2 916 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 FAM161AQ3B820 660 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 TAF7LQ5H9L4 462 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 USPL1Q5W0Q7 1092 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 CLASRPQ8N2M8 674 aaKnown RBP9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 UPF1Q92900 1129 aaKnown RBP eCLIP9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 FAM89AQ96GI7 184 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 GPATCH3Q96I76 525 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 COPRSQ9NQ92 184 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 SPEF2Q9C093 1822 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 CARMIL3Q8ND23 1372 aa9.6□□□□□ -0.87
TSPAN8-203ENST00000546561 AOX1Q06278 1338 aa9.59□□□□□ -0.87
TSPAN8-203ENST00000546561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.59□□□□□ -0.87
TSPAN8-203ENST00000546561 NPHP1O15259 732 aa9.59□□□□□ -0.87
TSPAN8-203ENST00000546561 EIF5BO60841 1220 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms