RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TBC1D16Q8TBP0 767 aa15.01□□□□□ -0.01
YBX3-217ENST00000546164 POLLQ9UGP5 575 aa15.01□□□□□ -0.01
YBX3-217ENST00000546164 ZNRF3Q9ULT6 936 aa15.01□□□□□ -0.01
YBX3-217ENST00000546164 XDHP47989 1333 aa15□□□□□ -0.01
YBX3-217ENST00000546164 KIF16BQ96L93 1317 aa15□□□□□ -0.01
YBX3-217ENST00000546164 IQCA1LA6NCM1 817 aa15□□□□□ -0.01
YBX3-217ENST00000546164 WASHC4Q2M389 1173 aa15□□□□□ -0.01
YBX3-217ENST00000546164 EPHA10Q5JZY3 1008 aa15□□□□□ -0.01
YBX3-217ENST00000546164 ARHGAP45Q92619 1136 aa15□□□□□ -0.01
YBX3-217ENST00000546164 API5Q9BZZ5 524 aaKnown RBP15□□□□□ -0.01
YBX3-217ENST00000546164 NOB1Q9ULX3 412 aaKnown RBP15□□□□□ -0.01
YBX3-217ENST00000546164 C6orf229H3BNL8 230 aa14.99□□□□□ -0.01
YBX3-217ENST00000546164 NBPF7P0C2Y1 421 aaPredicted RBP14.99□□□□□ -0.01
YBX3-217ENST00000546164 IGHMBP2P38935 993 aaKnown RBP14.99□□□□□ -0.01
YBX3-217ENST00000546164 FSTL1Q12841 308 aa14.99□□□□□ -0.01
YBX3-217ENST00000546164 EYA3Q99504 573 aa14.99□□□□□ -0.01
YBX3-217ENST00000546164 ANKIB1Q9P2G1 1089 aa14.99□□□□□ -0.01
YBX3-217ENST00000546164 GGA1Q9UJY5 639 aa14.99□□□□□ -0.01
YBX3-217ENST00000546164 MINPP1Q9UNW1 487 aa14.99□□□□□ -0.01
YBX3-217ENST00000546164 ANKRD18BA2A2Z9 1011 aa14.98□□□□□ -0.01
YBX3-217ENST00000546164 UFL1O94874 794 aa14.98□□□□□ -0.01
YBX3-217ENST00000546164 CCT4P50991 539 aaKnown RBP14.98□□□□□ -0.01
YBX3-217ENST00000546164 IFIT5Q13325 482 aaKnown RBP14.98□□□□□ -0.01
YBX3-217ENST00000546164 LMBR1LQ6UX01 489 aa14.98□□□□□ -0.01
YBX3-217ENST00000546164 KAZALD1Q96I82 304 aa14.98□□□□□ -0.01
YBX3-217ENST00000546164 SUCLG2Q96I99 432 aa14.98□□□□□ -0.01
YBX3-217ENST00000546164 USP44Q9H0E7 712 aa14.98□□□□□ -0.01
YBX3-217ENST00000546164 CEP350Q5VT06 3117 aa14.98□□□□□ -0.01
YBX3-217ENST00000546164 ATP2B4P23634 1241 aa14.97□□□□□ -0.01
YBX3-217ENST00000546164 CXCL9Q07325 125 aa14.97□□□□□ -0.01
YBX3-217ENST00000546164 RABL6Q3YEC7 729 aaPredicted RBP14.97□□□□□ -0.01
YBX3-217ENST00000546164 SMC1BQ8NDV3 1235 aa14.97□□□□□ -0.01
YBX3-217ENST00000546164 TAF1DQ9H5J8 278 aaPredicted RBP14.97□□□□□ -0.01
YBX3-217ENST00000546164 HACL1Q9UJ83 578 aa14.97□□□□□ -0.01
YBX3-217ENST00000546164 SCN4AP35499 1836 aa14.96□□□□□ -0.01
YBX3-217ENST00000546164 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
YBX3-217ENST00000546164 CIAPIN1Q6FI81 312 aa14.96□□□□□ -0.01
YBX3-217ENST00000546164 MPHOSPH8Q99549 860 aa14.96□□□□□ -0.01
YBX3-217ENST00000546164 ZC3H12CQ9C0D7 883 aaKnown RBP14.96□□□□□ -0.01
YBX3-217ENST00000546164 ANKRD2Q9GZV1 360 aa14.96□□□□□ -0.01
YBX3-217ENST00000546164 GJA3Q9Y6H8 435 aa14.96□□□□□ -0.01
YBX3-217ENST00000546164 RIMBP2O15034 1052 aa14.95□□□□□ -0.02
YBX3-217ENST00000546164 IPO8O15397 1037 aaKnown RBP14.95□□□□□ -0.02
YBX3-217ENST00000546164 HSPA6P17066 643 aa14.95□□□□□ -0.02
YBX3-217ENST00000546164 SCNN1DP51172 638 aa14.95□□□□□ -0.02
YBX3-217ENST00000546164 TNIP1Q15025 636 aa14.95□□□□□ -0.02
YBX3-217ENST00000546164 CCDC57Q2TAC2 916 aa14.95□□□□□ -0.02
YBX3-217ENST00000546164 GPR101Q96P66 508 aaPredicted RBP14.95□□□□□ -0.02
YBX3-217ENST00000546164 LEMD3Q9Y2U8 911 aa14.95□□□□□ -0.02
YBX3-217ENST00000546164 CHMP3Q9Y3E7 222 aa14.95□□□□□ -0.02
YBX3-217ENST00000546164 MED23Q9ULK4 1368 aa14.95□□□□□ -0.02
YBX3-217ENST00000546164 BCAR3O75815 825 aa14.94□□□□□ -0.02
YBX3-217ENST00000546164 EPHX2P34913 555 aa14.94□□□□□ -0.02
YBX3-217ENST00000546164 INTS3Q68E01 1043 aaKnown RBP14.94□□□□□ -0.02
YBX3-217ENST00000546164 ANKRD44Q8N8A2 993 aa14.94□□□□□ -0.02
YBX3-217ENST00000546164 BICC1Q9H694 974 aaKnown RBP14.94□□□□□ -0.02
YBX3-217ENST00000546164 DBNDD1Q9H9R9 158 aa14.94□□□□□ -0.02
YBX3-217ENST00000546164 ECE2O60344 883 aa14.93□□□□□ -0.02
YBX3-217ENST00000546164 RAD17O75943 681 aa14.93□□□□□ -0.02
YBX3-217ENST00000546164 TRIM27P14373 513 aa14.93□□□□□ -0.02
YBX3-217ENST00000546164 LMOD1P29536 600 aaPredicted RBP14.93□□□□□ -0.02
YBX3-217ENST00000546164 CHRNDQ07001 517 aa14.93□□□□□ -0.02
YBX3-217ENST00000546164 ATF7IPQ6VMQ6 1270 aa14.93□□□□□ -0.02
YBX3-217ENST00000546164 PNMA8AQ86V59 439 aaPredicted RBP14.93□□□□□ -0.02
YBX3-217ENST00000546164 LDHDQ86WU2 507 aa14.93□□□□□ -0.02
YBX3-217ENST00000546164 DOK7Q18PE1 504 aa14.92□□□□□ -0.02
YBX3-217ENST00000546164 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
YBX3-217ENST00000546164 GPRC5DQ9NZD1 345 aa14.92□□□□□ -0.02
YBX3-217ENST00000546164 ZNF804BA4D1E1 1349 aa14.92□□□□□ -0.02
YBX3-217ENST00000546164 WTIPA6NIX2 430 aaPredicted RBP14.91□□□□□ -0.02
YBX3-217ENST00000546164 UBTFL1P0CB47 393 aaPredicted RBP14.91□□□□□ -0.02
YBX3-217ENST00000546164 POTEIP0CG38 1075 aa14.91□□□□□ -0.02
YBX3-217ENST00000546164 POTEJP0CG39 1038 aa14.91□□□□□ -0.02
YBX3-217ENST00000546164 GMPSP49915 693 aaPredicted RBP14.91□□□□□ -0.02
YBX3-217ENST00000546164 TAF7LQ5H9L4 462 aa14.91□□□□□ -0.02
YBX3-217ENST00000546164 LDHAL6AQ6ZMR3 332 aa14.91□□□□□ -0.02
YBX3-217ENST00000546164 C15orf52Q6ZUT6 534 aaKnown RBP14.91□□□□□ -0.02
YBX3-217ENST00000546164 PODNQ7Z5L7 613 aa14.91□□□□□ -0.02
YBX3-217ENST00000546164 DPF2Q92785 391 aa14.91□□□□□ -0.02
YBX3-217ENST00000546164 HDAC5Q9UQL6 1122 aa14.91□□□□□ -0.02
YBX3-217ENST00000546164 ZNF609O15014 1411 aa14.91□□□□□ -0.02
YBX3-217ENST00000546164 SPEF2Q9C093 1822 aa14.9□□□□□ -0.02
YBX3-217ENST00000546164 PSMD14O00487 310 aa14.9□□□□□ -0.02
YBX3-217ENST00000546164 RPS12P25398 132 aaKnown RBP14.9□□□□□ -0.02
YBX3-217ENST00000546164 EPS15P42566 896 aa14.9□□□□□ -0.02
YBX3-217ENST00000546164 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
YBX3-217ENST00000546164 USP50Q70EL3 339 aaPredicted RBP14.9□□□□□ -0.02
YBX3-217ENST00000546164 ZNF594Q96JF6 807 aaPredicted RBP14.9□□□□□ -0.02
YBX3-217ENST00000546164 CNNM1Q9NRU3 951 aa14.9□□□□□ -0.02
YBX3-217ENST00000546164 ADARB2Q9NS39 739 aaKnown RBP14.9□□□□□ -0.02
YBX3-217ENST00000546164 ADAMTSL1Q8N6G6 1762 aa14.9□□□□□ -0.02
YBX3-217ENST00000546164 IRS2Q9Y4H2 1338 aa14.9□□□□□ -0.02
YBX3-217ENST00000546164 G3V3G9 751 aa14.89□□□□□ -0.03
YBX3-217ENST00000546164 VIL1P09327 827 aaKnown RBP14.89□□□□□ -0.03
YBX3-217ENST00000546164 APLP1P51693 650 aa14.89□□□□□ -0.03
YBX3-217ENST00000546164 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
YBX3-217ENST00000546164 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
YBX3-217ENST00000546164 COA1Q9GZY4 146 aa14.89□□□□□ -0.03
YBX3-217ENST00000546164 KCNQ5Q9NR82 932 aa14.89□□□□□ -0.03
YBX3-217ENST00000546164 RIPOR2Q9Y4F9 1068 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms