RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 UBR2Q8IWV8 1755 aa8.68□□□□□ -1.02
LDHC-209ENST00000545848 PPM1GO15355 546 aaPredicted RBP8.67□□□□□ -1.02
LDHC-209ENST00000545848 APBA3O96018 575 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 NR5A1Q13285 461 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 PDE3BQ13370 1112 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 R3HDM1Q15032 1099 aaKnown RBP8.67□□□□□ -1.02
LDHC-209ENST00000545848 FAM196AQ6ZSG2 479 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 SMIM5Q71RC9 77 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 SH3BP5LQ7L8J4 393 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 AMIGO3Q86WK7 504 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 LRRN4Q8WUT4 740 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 C1QTNF2Q9BXJ5 285 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 LRRC4BQ9NT99 713 aa8.67□□□□□ -1.02
LDHC-209ENST00000545848 IGSF1Q8N6C5 1336 aa8.66□□□□□ -1.02
LDHC-209ENST00000545848 MAGEB6P1A0A0J9YX57 407 aa8.66□□□□□ -1.02
LDHC-209ENST00000545848 ZNF827Q17R98 1081 aa8.66□□□□□ -1.02
LDHC-209ENST00000545848 CC2D1BQ5T0F9 858 aaKnown RBP8.66□□□□□ -1.02
LDHC-209ENST00000545848 PPP2R2DQ66LE6 453 aa8.66□□□□□ -1.02
LDHC-209ENST00000545848 GPKOWQ92917 476 aaPredicted RBP eCLIP8.66□□□□□ -1.02
LDHC-209ENST00000545848 ZFP42Q96MM3 310 aa8.66□□□□□ -1.02
LDHC-209ENST00000545848 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
LDHC-209ENST00000545848 KIAA1551Q9HCM1 1747 aa8.66□□□□□ -1.02
LDHC-209ENST00000545848 TERTO14746 1132 aaKnown RBP8.65□□□□□ -1.02
LDHC-209ENST00000545848 NR3C2P08235 984 aa8.65□□□□□ -1.02
LDHC-209ENST00000545848 GRM5P41594 1212 aa8.65□□□□□ -1.02
LDHC-209ENST00000545848 CDCA8Q53HL2 280 aa8.65□□□□□ -1.02
LDHC-209ENST00000545848 MRPL14Q6P1L8 145 aaKnown RBP8.65□□□□□ -1.02
LDHC-209ENST00000545848 DDX54Q8TDD1 881 aaKnown RBP8.65□□□□□ -1.02
LDHC-209ENST00000545848 CICQ96RK0 1608 aaPredicted RBP8.65□□□□□ -1.03
LDHC-209ENST00000545848 KIF24Q5T7B8 1368 aa8.64□□□□□ -1.03
LDHC-209ENST00000545848 ZIC2O95409 532 aaPredicted RBP8.64□□□□□ -1.03
LDHC-209ENST00000545848 BAG6P46379 1132 aa8.64□□□□□ -1.03
LDHC-209ENST00000545848 ZFAND3Q9H8U3 227 aa8.64□□□□□ -1.03
LDHC-209ENST00000545848 EXOC5O00471 708 aa8.63□□□□□ -1.03
LDHC-209ENST00000545848 FSHRP23945 695 aa8.63□□□□□ -1.03
LDHC-209ENST00000545848 IL13P35225 146 aa8.63□□□□□ -1.03
LDHC-209ENST00000545848 VASH1Q7L8A9 365 aaPredicted RBP8.63□□□□□ -1.03
LDHC-209ENST00000545848 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
LDHC-209ENST00000545848 TRMT44Q8IYL2 757 aaKnown RBP8.63□□□□□ -1.03
LDHC-209ENST00000545848 ITPKCQ96DU7 683 aa8.63□□□□□ -1.03
LDHC-209ENST00000545848 FKBPLQ9UIM3 349 aa8.63□□□□□ -1.03
LDHC-209ENST00000545848 MAP4K5Q9Y4K4 846 aa8.63□□□□□ -1.03
LDHC-209ENST00000545848 MRC1P22897 1456 aa8.63□□□□□ -1.03
LDHC-209ENST00000545848 KDRP35968 1356 aa8.62□□□□□ -1.03
LDHC-209ENST00000545848 GOLGB1Q14789 3259 aaKnown RBP8.62□□□□□ -1.03
LDHC-209ENST00000545848 AP1G2O75843 785 aa8.62□□□□□ -1.03
LDHC-209ENST00000545848 SCARF1Q14162 830 aa8.62□□□□□ -1.03
LDHC-209ENST00000545848 NR6A1Q15406 480 aa8.62□□□□□ -1.03
LDHC-209ENST00000545848 TXNRD1Q16881 649 aa8.62□□□□□ -1.03
LDHC-209ENST00000545848 PDXDC2PQ6P474 469 aa8.62□□□□□ -1.03
LDHC-209ENST00000545848 PURBQ96QR8 312 aaKnown RBP8.62□□□□□ -1.03
LDHC-209ENST00000545848 UTRNP46939 3433 aa8.62□□□□□ -1.03
LDHC-209ENST00000545848 ZNF831Q5JPB2 1677 aa8.62□□□□□ -1.03
LDHC-209ENST00000545848 KCPQ6ZWJ8 1503 aa8.61□□□□□ -1.03
LDHC-209ENST00000545848 MTHFSP49914 203 aa8.61□□□□□ -1.03
LDHC-209ENST00000545848 ERFEQ4G0M1 354 aa8.61□□□□□ -1.03
LDHC-209ENST00000545848 MORC1Q86VD1 984 aa8.61□□□□□ -1.03
LDHC-209ENST00000545848 ZCRB1Q8TBF4 217 aaKnown RBP8.61□□□□□ -1.03
LDHC-209ENST00000545848 SLC4A9Q96Q91 983 aa8.61□□□□□ -1.03
LDHC-209ENST00000545848 ARHGAP9Q9BRR9 750 aa8.61□□□□□ -1.03
LDHC-209ENST00000545848 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
LDHC-209ENST00000545848 CDCA7Q9BWT1 371 aaPredicted RBP8.6□□□□□ -1.03
LDHC-209ENST00000545848 NXF1Q9UBU9 619 aaKnown RBP8.6□□□□□ -1.03
LDHC-209ENST00000545848 KDM3BQ7LBC6 1761 aa8.6□□□□□ -1.03
LDHC-209ENST00000545848 PARD3Q8TEW0 1356 aa8.6□□□□□ -1.03
LDHC-209ENST00000545848 NPC1L1Q9UHC9 1359 aa8.6□□□□□ -1.03
LDHC-209ENST00000545848 PLSCR1O15162 318 aa8.59□□□□□ -1.03
LDHC-209ENST00000545848 HMOX1P09601 288 aa8.59□□□□□ -1.03
LDHC-209ENST00000545848 PHKG2P15735 406 aa8.59□□□□□ -1.03
LDHC-209ENST00000545848 SF3B2Q13435 895 aaKnown RBP8.59□□□□□ -1.03
LDHC-209ENST00000545848 ZC3H4Q9UPT8 1303 aaKnown RBP8.58□□□□□ -1.04
LDHC-209ENST00000545848 WIPF1O43516 503 aa8.58□□□□□ -1.04
LDHC-209ENST00000545848 USP17L8P0C7I0 530 aa8.58□□□□□ -1.04
LDHC-209ENST00000545848 TATP17735 454 aaPredicted RBP8.58□□□□□ -1.04
LDHC-209ENST00000545848 RFC5P40937 340 aa8.58□□□□□ -1.04
LDHC-209ENST00000545848 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
LDHC-209ENST00000545848 PIGBQ92521 554 aa8.58□□□□□ -1.04
LDHC-209ENST00000545848 HMX1Q9NP08 348 aaPredicted RBP8.58□□□□□ -1.04
LDHC-209ENST00000545848 KNSTRNQ9Y448 316 aa8.58□□□□□ -1.04
LDHC-209ENST00000545848 PNPLA7Q6ZV29 1317 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 PCDH11XQ9BZA7 1347 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 PCDH11YQ9BZA8 1340 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
LDHC-209ENST00000545848 ITPK1Q13572 414 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 C6orf118Q5T5N4 469 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 SULT6B1Q6IMI4 303 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 ZBTB33Q86T24 672 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 CCDC116Q8IYX3 515 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 EPS8L1Q8TE68 723 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 SYTL4Q96C24 671 aaPredicted RBP8.57□□□□□ -1.04
LDHC-209ENST00000545848 SLC10A4Q96EP9 437 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 GOPCQ9HD26 462 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 ASAP1Q9ULH1 1129 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 N4BP2Q86UW6 1770 aaPredicted RBP8.57□□□□□ -1.04
LDHC-209ENST00000545848 BRCA1P38398 1863 aaKnown RBP8.57□□□□□ -1.04
LDHC-209ENST00000545848 PALLDQ8WX93 1383 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 KIF13BQ9NQT8 1826 aa8.57□□□□□ -1.04
LDHC-209ENST00000545848 UPP2O95045 317 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 ZBTB7AO95365 584 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 PPP2R1AP30153 589 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms