RNA–Protein interactions for RNA: ENST00000545625.5

RAB6A-210, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-210ENST00000545625 CEP85Q6P2H3 762 aa8.63□□□□□ -1.03
RAB6A-210ENST00000545625 JARID2Q92833 1246 aaPredicted RBP8.63□□□□□ -1.03
RAB6A-210ENST00000545625 ZBTB1Q9Y2K1 713 aa8.63□□□□□ -1.03
RAB6A-210ENST00000545625 FAM177BA6PVY3 158 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 NPHP1O15259 732 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 SRGAP3O43295 1099 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 RNF40O75150 1001 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 ZPR1O75312 459 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 SURF6O75683 361 aaKnown RBP8.62□□□□□ -1.03
RAB6A-210ENST00000545625 APBA3O96018 575 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 GPTP24298 496 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 GTF2E1P29083 439 aaPredicted RBP8.62□□□□□ -1.03
RAB6A-210ENST00000545625 TCIRG1Q13488 830 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 ITPK1Q13572 414 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 GCKRQ14397 625 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 PTF1AQ7RTS3 328 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 AK7Q96M32 723 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 SLC4A9Q96Q91 983 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 LNPKQ9C0E8 428 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
RAB6A-210ENST00000545625 ZNF652Q9Y2D9 606 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 KCPQ6ZWJ8 1503 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 SHANK3Q9BYB0 1731 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 RGS12O14924 1447 aa8.62□□□□□ -1.03
RAB6A-210ENST00000545625 MAP3K15Q6ZN16 1313 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 DOT1LQ8TEK3 1739 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.61□□□□□ -1.03
RAB6A-210ENST00000545625 GNPATO15228 680 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 G3BP1Q13283 466 aaKnown RBP eCLIP8.61□□□□□ -1.03
RAB6A-210ENST00000545625 SF3B2Q13435 895 aaKnown RBP8.61□□□□□ -1.03
RAB6A-210ENST00000545625 HSP90AB4PQ58FF6 505 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 INTS5Q6P9B9 1019 aaKnown RBP8.61□□□□□ -1.03
RAB6A-210ENST00000545625 UBE3BQ7Z3V4 1068 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 PPP1R42Q7Z4L9 355 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 CHD1LQ86WJ1 897 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 SKAP1Q86WV1 359 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 CCDC191Q8NCU4 936 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 RTCBQ9Y3I0 505 aaKnown RBP8.61□□□□□ -1.03
RAB6A-210ENST00000545625 WNK3Q9BYP7 1800 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 GLI3P10071 1580 aa8.61□□□□□ -1.03
RAB6A-210ENST00000545625 PXDNLA1KZ92 1463 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 ERVV-1B6SEH8 477 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 RGS20O76081 388 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 IGKV5-2P06315 115 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 RFC4P35249 363 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 TAF7LQ5H9L4 462 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 TRAPPC3LQ5T215 181 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
RAB6A-210ENST00000545625 SIRT2Q8IXJ6 389 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 TTC13Q8NBP0 860 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 LINC00116Q8NCU8 138 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 SUCLG2Q96I99 432 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 DCTPP1Q9H773 170 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 TRMT112Q9UI30 125 aaKnown RBP8.6□□□□□ -1.03
RAB6A-210ENST00000545625 ATP10DQ9P241 1426 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 TOGARAM1Q9Y4F4 1720 aa8.6□□□□□ -1.03
RAB6A-210ENST00000545625 C5P01031 1676 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 ITGB4P16144 1822 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 EIF5P55010 431 aaKnown RBP8.59□□□□□ -1.03
RAB6A-210ENST00000545625 NUCB1Q02818 461 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 HLFQ16534 295 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 POTEAQ6S8J7 498 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 BICDL1Q6ZP65 573 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 LRP10Q7Z4F1 713 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 SMC5Q8IY18 1101 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 LRRCC1Q9C099 1032 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 BICC1Q9H694 974 aaKnown RBP8.59□□□□□ -1.03
RAB6A-210ENST00000545625 EXOC6BQ9Y2D4 811 aa8.59□□□□□ -1.03
RAB6A-210ENST00000545625 PNMA6EA0A0J9YXQ4 647 aa8.58□□□□□ -1.04
RAB6A-210ENST00000545625 SMARCA5O60264 1052 aaPredicted RBP8.58□□□□□ -1.04
RAB6A-210ENST00000545625 RAB11FIP3O75154 756 aa8.58□□□□□ -1.04
RAB6A-210ENST00000545625 RPS6KA4O75676 772 aa8.58□□□□□ -1.04
RAB6A-210ENST00000545625 HSP90B1P14625 803 aaKnown RBP8.58□□□□□ -1.04
RAB6A-210ENST00000545625 RC3H1Q5TC82 1133 aaKnown RBP8.58□□□□□ -1.04
RAB6A-210ENST00000545625 FAM89AQ96GI7 184 aa8.58□□□□□ -1.04
RAB6A-210ENST00000545625 UTP14AQ9BVJ6 771 aaKnown RBP8.58□□□□□ -1.04
RAB6A-210ENST00000545625 NIP7Q9Y221 180 aaKnown RBP eCLIP8.58□□□□□ -1.04
RAB6A-210ENST00000545625 CACNA1FO60840 1977 aa8.58□□□□□ -1.04
RAB6A-210ENST00000545625 H7C1W4 665 aa8.57□□□□□ -1.04
RAB6A-210ENST00000545625 CCDC57Q2TAC2 916 aa8.57□□□□□ -1.04
RAB6A-210ENST00000545625 SLC27A3Q5K4L6 730 aa8.57□□□□□ -1.04
RAB6A-210ENST00000545625 SWT1Q5T5J6 900 aaKnown RBP8.57□□□□□ -1.04
RAB6A-210ENST00000545625 LMBR1LQ6UX01 489 aa8.57□□□□□ -1.04
RAB6A-210ENST00000545625 ERC1Q8IUD2 1116 aa8.57□□□□□ -1.04
RAB6A-210ENST00000545625 CCDC85AQ96PX6 553 aaPredicted RBP8.57□□□□□ -1.04
RAB6A-210ENST00000545625 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
RAB6A-210ENST00000545625 ISCA1Q9BUE6 129 aa8.57□□□□□ -1.04
RAB6A-210ENST00000545625 SIL1Q9H173 461 aa8.57□□□□□ -1.04
RAB6A-210ENST00000545625 TFCP2L1Q9NZI6 479 aa8.57□□□□□ -1.04
RAB6A-210ENST00000545625 CNTNAP4Q9C0A0 1308 aa8.56□□□□□ -1.04
RAB6A-210ENST00000545625 THSD7AQ9UPZ6 1657 aa8.56□□□□□ -1.04
RAB6A-210ENST00000545625 PAPPAQ13219 1627 aa8.56□□□□□ -1.04
RAB6A-210ENST00000545625 SEMA3EO15041 775 aa8.56□□□□□ -1.04
RAB6A-210ENST00000545625 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
RAB6A-210ENST00000545625 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
RAB6A-210ENST00000545625 TXNRD1Q16881 649 aa8.56□□□□□ -1.04
RAB6A-210ENST00000545625 PARP10Q53GL7 1025 aa8.56□□□□□ -1.04
RAB6A-210ENST00000545625 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
RAB6A-210ENST00000545625 SMIM5Q71RC9 77 aa8.56□□□□□ -1.04
RAB6A-210ENST00000545625 NLRP10Q86W26 655 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms