RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 PKN2Q16513 984 aaKnown RBP19.33■□□□□ 0.68
RTN3-214ENST00000545432 RASAL3Q86YV0 1011 aa19.33■□□□□ 0.68
RTN3-214ENST00000545432 SULF1Q8IWU6 871 aa19.33■□□□□ 0.68
RTN3-214ENST00000545432 CHL1O00533 1208 aa19.32■□□□□ 0.68
RTN3-214ENST00000545432 RIMBP2O15034 1052 aa19.32■□□□□ 0.68
RTN3-214ENST00000545432 RIPK4P57078 832 aa19.32■□□□□ 0.68
RTN3-214ENST00000545432 RPS8P62241 208 aaKnown RBP19.32■□□□□ 0.68
RTN3-214ENST00000545432 NOM1Q5C9Z4 860 aaKnown RBP19.32■□□□□ 0.68
RTN3-214ENST00000545432 RBM26Q5T8P6 1007 aaKnown RBP19.32■□□□□ 0.68
RTN3-214ENST00000545432 CDCA5Q96FF9 252 aa19.32■□□□□ 0.68
RTN3-214ENST00000545432 FAM89AQ96GI7 184 aa19.32■□□□□ 0.68
RTN3-214ENST00000545432 GGA3Q9NZ52 723 aa19.32■□□□□ 0.68
RTN3-214ENST00000545432 ASTN2O75129 1339 aaPredicted RBP19.31■□□□□ 0.68
RTN3-214ENST00000545432 MAPK8IP3Q9UPT6 1336 aa19.31■□□□□ 0.68
RTN3-214ENST00000545432 C6orf229H3BNL8 230 aa19.31■□□□□ 0.68
RTN3-214ENST00000545432 DOK7Q18PE1 504 aa19.31■□□□□ 0.68
RTN3-214ENST00000545432 AGBL3Q8NEM8 1001 aa19.31■□□□□ 0.68
RTN3-214ENST00000545432 GMLQ99445 158 aa19.31■□□□□ 0.68
RTN3-214ENST00000545432 HPS5Q9UPZ3 1129 aa19.31■□□□□ 0.68
RTN3-214ENST00000545432 COL4A1P02462 1669 aa19.3■□□□□ 0.68
RTN3-214ENST00000545432 ANKRD13DQ6ZTN6 518 aa19.3■□□□□ 0.68
RTN3-214ENST00000545432 PITPNM2Q9BZ72 1349 aa19.29■□□□□ 0.68
RTN3-214ENST00000545432 DDX60Q8IY21 1712 aaKnown RBP19.29■□□□□ 0.68
RTN3-214ENST00000545432 TMPOP42166 694 aaKnown RBP19.29■□□□□ 0.68
RTN3-214ENST00000545432 ZC3H12CQ9C0D7 883 aaKnown RBP19.29■□□□□ 0.68
RTN3-214ENST00000545432 AKAP11Q9UKA4 1901 aa19.29■□□□□ 0.68
RTN3-214ENST00000545432 HOXB7P09629 217 aa19.28■□□□□ 0.68
RTN3-214ENST00000545432 SCARF1Q14162 830 aa19.28■□□□□ 0.68
RTN3-214ENST00000545432 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
RTN3-214ENST00000545432 SCN9AQ15858 1988 aa19.28■□□□□ 0.68
RTN3-214ENST00000545432 TM4SF4P48230 202 aa19.27■□□□□ 0.68
RTN3-214ENST00000545432 LMOD3Q0VAK6 560 aa19.27■□□□□ 0.68
RTN3-214ENST00000545432 KRT24Q2M2I5 525 aa19.27■□□□□ 0.68
RTN3-214ENST00000545432 CFHR5Q9BXR6 569 aa19.27■□□□□ 0.68
RTN3-214ENST00000545432 CHPF2Q9P2E5 772 aa19.27■□□□□ 0.68
RTN3-214ENST00000545432 IRS4O14654 1257 aaPredicted RBP19.26■□□□□ 0.67
RTN3-214ENST00000545432 ANGEL2Q5VTE6 544 aaKnown RBP19.26■□□□□ 0.67
RTN3-214ENST00000545432 ZNF296Q8WUU4 475 aaPredicted RBP19.25■□□□□ 0.67
RTN3-214ENST00000545432 DBF4Q9UBU7 674 aaPredicted RBP19.25■□□□□ 0.67
RTN3-214ENST00000545432 ATP5J2-PTCD1G3V325 749 aa19.24■□□□□ 0.67
RTN3-214ENST00000545432 ZBTB38Q8NAP3 1195 aaPredicted RBP19.24■□□□□ 0.67
RTN3-214ENST00000545432 MYOZ2Q9NPC6 264 aa19.24■□□□□ 0.67
RTN3-214ENST00000545432 PAPPA2Q9BXP8 1791 aa19.24■□□□□ 0.67
RTN3-214ENST00000545432 USP17L8P0C7I0 530 aa19.23■□□□□ 0.67
RTN3-214ENST00000545432 PODNQ7Z5L7 613 aa19.23■□□□□ 0.67
RTN3-214ENST00000545432 SEC31BQ9NQW1 1179 aa19.23■□□□□ 0.67
RTN3-214ENST00000545432 HYPKQ9NX55 129 aa19.23■□□□□ 0.67
RTN3-214ENST00000545432 GGA1Q9UJY5 639 aa19.23■□□□□ 0.67
RTN3-214ENST00000545432 HDGFL1Q5TGJ6 251 aa19.22■□□□□ 0.67
RTN3-214ENST00000545432 TRIM35Q9UPQ4 493 aa19.22■□□□□ 0.67
RTN3-214ENST00000545432 GPR25O00155 361 aa19.21■□□□□ 0.67
RTN3-214ENST00000545432 UFL1O94874 794 aa19.21■□□□□ 0.67
RTN3-214ENST00000545432 TBC1D8O95759 1140 aa19.21■□□□□ 0.67
RTN3-214ENST00000545432 HSP90B1P14625 803 aaKnown RBP19.21■□□□□ 0.67
RTN3-214ENST00000545432 FBXO46Q6PJ61 603 aaPredicted RBP19.21■□□□□ 0.67
RTN3-214ENST00000545432 MOB2Q70IA6 237 aa19.21■□□□□ 0.67
RTN3-214ENST00000545432 ZNF428Q96B54 188 aa19.21■□□□□ 0.67
RTN3-214ENST00000545432 USP17L3A6NCW0 530 aa19.2■□□□□ 0.66
RTN3-214ENST00000545432 USP17L4A6NCW7 530 aa19.2■□□□□ 0.66
RTN3-214ENST00000545432 USP17L1Q7RTZ2 530 aa19.2■□□□□ 0.66
RTN3-214ENST00000545432 HDAC9Q9UKV0 1011 aa19.2■□□□□ 0.66
RTN3-214ENST00000545432 UBE2Q2LH0YL09 131 aa19.19■□□□□ 0.66
RTN3-214ENST00000545432 MMP14P50281 582 aa19.19■□□□□ 0.66
RTN3-214ENST00000545432 ANKIB1Q9P2G1 1089 aa19.19■□□□□ 0.66
RTN3-214ENST00000545432 PSME4Q14997 1843 aa19.18■□□□□ 0.66
RTN3-214ENST00000545432 PCCAP05165 728 aaPredicted RBP19.18■□□□□ 0.66
RTN3-214ENST00000545432 ATP2B4P23634 1241 aa19.18■□□□□ 0.66
RTN3-214ENST00000545432 RTL5Q5HYW3 569 aaPredicted RBP19.18■□□□□ 0.66
RTN3-214ENST00000545432 CCDC191Q8NCU4 936 aa19.18■□□□□ 0.66
RTN3-214ENST00000545432 XDHP47989 1333 aa19.18■□□□□ 0.66
RTN3-214ENST00000545432 G3V3G9 751 aa19.17■□□□□ 0.66
RTN3-214ENST00000545432 PDE8AO60658 829 aa19.17■□□□□ 0.66
RTN3-214ENST00000545432 NBPF9Q3BBW0 867 aa19.17■□□□□ 0.66
RTN3-214ENST00000545432 CCDC152Q4G0S7 254 aa19.17■□□□□ 0.66
RTN3-214ENST00000545432 DCAF8Q5TAQ9 597 aa19.17■□□□□ 0.66
RTN3-214ENST00000545432 GCC1Q96CN9 775 aa19.17■□□□□ 0.66
RTN3-214ENST00000545432 WNT10BO00744 389 aa19.16■□□□□ 0.66
RTN3-214ENST00000545432 LDLRAD1Q5T700 205 aa19.16■□□□□ 0.66
RTN3-214ENST00000545432 FKTNO75072 461 aa19.15■□□□□ 0.66
RTN3-214ENST00000545432 ZNF853P0CG23 659 aa19.15■□□□□ 0.66
RTN3-214ENST00000545432 DACT2Q5SW24 774 aa19.15■□□□□ 0.66
RTN3-214ENST00000545432 PRAMEF18Q5VWM3 479 aa19.15■□□□□ 0.66
RTN3-214ENST00000545432 DUSP27Q5VZP5 1158 aa19.15■□□□□ 0.66
RTN3-214ENST00000545432 R3HDMLQ9H3Y0 253 aa19.15■□□□□ 0.66
RTN3-214ENST00000545432 SREBF2Q12772 1141 aa19.14■□□□□ 0.65
RTN3-214ENST00000545432 RALBP1Q15311 655 aa19.14■□□□□ 0.65
RTN3-214ENST00000545432 STRIP1Q5VSL9 837 aa19.14■□□□□ 0.65
RTN3-214ENST00000545432 ZBED3Q96IU2 234 aaPredicted RBP19.14■□□□□ 0.65
RTN3-214ENST00000545432 MED23Q9ULK4 1368 aa19.14■□□□□ 0.65
RTN3-214ENST00000545432 WTIPA6NIX2 430 aaPredicted RBP19.13■□□□□ 0.65
RTN3-214ENST00000545432 PTPN12Q05209 780 aaKnown RBP19.13■□□□□ 0.65
RTN3-214ENST00000545432 RIC3Q7Z5B4 369 aa19.13■□□□□ 0.65
RTN3-214ENST00000545432 ANKRD18AQ8IVF6 992 aa19.13■□□□□ 0.65
RTN3-214ENST00000545432 BSDC1Q9NW68 430 aaPredicted RBP19.13■□□□□ 0.65
RTN3-214ENST00000545432 SCAF8Q9UPN6 1271 aaKnown RBP19.13■□□□□ 0.65
RTN3-214ENST00000545432 MYO3BQ8WXR4 1341 aa19.12■□□□□ 0.65
RTN3-214ENST00000545432 MAP3K11Q16584 847 aa19.12■□□□□ 0.65
RTN3-214ENST00000545432 SPRYD7Q5W111 196 aa19.12■□□□□ 0.65
RTN3-214ENST00000545432 RUNDC1Q96C34 613 aa19.12■□□□□ 0.65
RTN3-214ENST00000545432 PHAXQ9H814 394 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms