RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 APBB1O00213 710 aa6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 CYP19A1P11511 503 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 IL6STP40189 918 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 MFAP1P55081 439 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 CASP7P55210 303 aa6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 TRIM28Q13263 835 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 OS9Q13438 667 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 FAM98CQ17RN3 349 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 TTLL7Q6ZT98 887 aa6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 OTUD7AQ8TE49 926 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 SYTL4Q96C24 671 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 KAZALD1Q96I82 304 aa6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 ISCA1Q9BUE6 129 aa6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 USP21Q9UK80 565 aa6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 SCN7AQ01118 1682 aa6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 TTC41PQ6P2S7 1318 aa6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 AK9Q5TCS8 1911 aa6.7□□□□□ -1.34
NPIPB3-214ENST00000545358 LAMB2P55268 1798 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 BTAF1O14981 1849 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 LRP5O75197 1615 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 A0A087WZG4 1122 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 LOC102724428A0A0B4J2F2 783 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 ERVV-1B6SEH8 477 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 H7C1W4 665 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 SDSP20132 328 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 RBM25P49756 843 aaKnown RBP6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 SIK1P57059 783 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 TCIRG1Q13488 830 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 MEX3CQ5U5Q3 659 aaKnown RBP6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 GIGYF2Q6Y7W6 1299 aaKnown RBP6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 UBE3BQ7Z3V4 1068 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 C16orf71Q8IYS4 520 aaPredicted RBP6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 CLASRPQ8N2M8 674 aaKnown RBP6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 GPATCH3Q96I76 525 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 SLC4A9Q96Q91 983 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 C22orf23Q9BZE7 217 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 ZBTB3Q9H5J0 574 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 COPRSQ9NQ92 184 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 ZBTB1Q9Y2K1 713 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 CDHR2Q9BYE9 1310 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 NUP98P52948 1817 aa6.69□□□□□ -1.34
NPIPB3-214ENST00000545358 MYH3P11055 1940 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 LY75O60449 1722 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 BHMG1C9JSJ3 638 aaPredicted RBP6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 ATP5J2-PTCD1G3V325 749 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 ERC2O15083 957 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 PCCAP05165 728 aaPredicted RBP6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 OSBPP22059 807 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 HSPA1LP34931 641 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 G3BP1Q13283 466 aaKnown RBP eCLIP6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 BECN1Q14457 450 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 SMYD5Q6GMV2 418 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 LAPTM4BQ86VI4 370 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 ACSBG1Q96GR2 724 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 PLA2G12BQ9BX93 195 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 CCDC87Q9NVE4 849 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 RBM27Q9P2N5 1060 aaKnown RBP6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 SBF2Q86WG5 1849 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 AFF2P51816 1311 aa6.68□□□□□ -1.34
NPIPB3-214ENST00000545358 EPB41L2O43491 1005 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 GLRX3O76003 335 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 REC8O95072 547 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 IFIT2P09913 472 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 COL9A1P20849 921 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 ATP6V1AP38606 617 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 CRKLP46109 303 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 RFX5P48382 616 aaPredicted RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 EPHA10Q5JZY3 1008 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 DZIP3Q86Y13 1208 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 CNTROBQ8N137 903 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 ZBTB38Q8NAP3 1195 aaPredicted RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 PI4K2BQ8TCG2 481 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 IL1RAPL2Q9NP60 686 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 DAXXQ9UER7 740 aaPredicted RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 TRPC5Q9UL62 973 aaPredicted RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 PA2G4Q9UQ80 394 aaKnown RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 ZNF330Q9Y3S2 320 aaPredicted RBP6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 CNTNAP4Q9C0A0 1308 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 RFX7Q2KHR2 1363 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 KAT6BQ8WYB5 2073 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 ZNF609O15014 1411 aa6.67□□□□□ -1.34
NPIPB3-214ENST00000545358 A0A0G2JS52 829 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 GOLGA8CPA6NN73 597 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 TRIM6-TRIM34B2RNG4 842 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 CIAO1O76071 339 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 EIF5P55010 431 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 FOXO4P98177 505 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 MYT1Q01538 1121 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 PTPN12Q05209 780 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 TSR1Q2NL82 804 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 INTS5Q6P9B9 1019 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 PACS2Q86VP3 889 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 NLRP10Q86W26 655 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 GJD4Q96KN9 370 aaPredicted RBP6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 AK7Q96M32 723 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 COL24A1Q17RW2 1714 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 TAF1LQ8IZX4 1826 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 SPEF2Q9C093 1822 aa6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 MYH14Q7Z406 1995 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-214ENST00000545358 SASH1O94885 1247 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms