RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 CCDC152Q4G0S7 254 aa8.61□□□□□ -1.03
HMGCS2-204ENST00000544913 SRCAPQ6ZRS2 3230 aa8.61□□□□□ -1.03
HMGCS2-204ENST00000544913 LRRC37AA6NMS7 1700 aa8.61□□□□□ -1.03
HMGCS2-204ENST00000544913 KIAA1551Q9HCM1 1747 aa8.61□□□□□ -1.03
HMGCS2-204ENST00000544913 C10orf71Q711Q0 1435 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 ANKRD18BA2A2Z9 1011 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 WTIPA6NIX2 430 aaPredicted RBP8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 MX1P20591 662 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 TNNI3KQ59H18 835 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 GPR108Q9NPR9 543 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 FPGT-TNNI3KV9GXZ4 949 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 AOX1Q06278 1338 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 KIF13BQ9NQT8 1826 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 FGFR2P21802 821 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 BMP2KLQ5H9B9 411 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 TTC22Q5TAA0 569 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 SGIP1Q9BQI5 828 aa8.6□□□□□ -1.03
HMGCS2-204ENST00000544913 IRS2Q9Y4H2 1338 aa8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 SNAP23O00161 211 aa8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 HSP90B1P14625 803 aaKnown RBP8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 OS9Q13438 667 aaPredicted RBP8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 BECN1Q14457 450 aa8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 LDHAL6AQ6ZMR3 332 aa8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 AACSQ86V21 672 aa8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 NLRP3Q96P20 1036 aa8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 BRIP1Q9BX63 1249 aa8.59□□□□□ -1.03
HMGCS2-204ENST00000544913 DUOX1Q9NRD9 1551 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 ADORA1P30542 326 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 CLASRPQ8N2M8 674 aaKnown RBP8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 CCDC8Q9H0W5 538 aaPredicted RBP8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 SNED1Q8TER0 1413 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 DLEC1Q9Y238 1755 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 A0A1B0GUL7 405 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 PDE8BO95263 885 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 SRGNP10124 158 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 GTF2E1P29083 439 aaPredicted RBP8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 TIMM10P62072 90 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 ST5P78524 1137 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 R3HDM1Q15032 1099 aaKnown RBP8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 SLC16A10Q8TF71 515 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 BSDC1Q9NW68 430 aaPredicted RBP8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 MINPP1Q9UNW1 487 aa8.58□□□□□ -1.04
HMGCS2-204ENST00000544913 TTC41PQ6P2S7 1318 aa8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 AKAP11Q9UKA4 1901 aa8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 SDSP20132 328 aa8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 RPS8P62241 208 aaKnown RBP8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 CHRNDQ07001 517 aa8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 MAPK8IP2Q13387 824 aaPredicted RBP8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 GRAPQ13588 217 aa8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 GRAPLQ8TC17 118 aaPredicted RBP8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 CDC5LQ99459 802 aaKnown RBP8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 ECHDC1Q9NTX5 307 aa8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 PARP3Q9Y6F1 533 aa8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 MROH5Q6ZUA9 1318 aa8.57□□□□□ -1.04
HMGCS2-204ENST00000544913 TAF5LO75529 589 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 SEC24BO95487 1268 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 TAF7LQ5H9L4 462 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 METTL24Q5JXM2 366 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 ANKRD18AQ8IVF6 992 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 CNNM1Q9NRU3 951 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 CEP126Q9P2H0 1117 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 COL1A1P02452 1464 aaPredicted RBP8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 ZBTB7AO95365 584 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 KLRK1P26718 216 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 PTGER2P43116 358 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 SCARF1Q14162 830 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 ATP2B3Q16720 1220 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 CRAMP1Q96RY5 1269 aa8.56□□□□□ -1.04
HMGCS2-204ENST00000544913 SLX4Q8IY92 1834 aa8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 PSDA5PKW4 1024 aaPredicted RBP8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 IFIT2P09913 472 aaKnown RBP8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 ATP5JP18859 108 aa8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 IGHMBP2P38935 993 aaKnown RBP8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 PUM3Q15397 648 aaKnown RBP8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 DDX46Q7L014 1031 aaKnown RBP8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 XAGE2Q96GT9 111 aa8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 MPHOSPH8Q99549 860 aa8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 IL25Q9H293 177 aa8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 ZNF804BA4D1E1 1349 aa8.55□□□□□ -1.04
HMGCS2-204ENST00000544913 KCNA3P22001 575 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 OLFM4Q6UX06 510 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 C7orf43Q8WVR3 580 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 EDC3Q96F86 508 aaKnown RBP8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 MTFR1LQ9H019 292 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 BRCA1P38398 1863 aaKnown RBP8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 GLRX3O76003 335 aaKnown RBP8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 NPR1P16066 1061 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 CHRNA5P30532 468 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 PHKA1P46020 1223 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 TBC1D9Q6ZT07 1266 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 TXNRD3Q86VQ6 643 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 RPGRQ92834 1020 aaKnown RBP8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 HAUS7Q99871 368 aa8.54□□□□□ -1.04
HMGCS2-204ENST00000544913 NPHP1O15259 732 aa8.53□□□□□ -1.04
HMGCS2-204ENST00000544913 ARID4AP29374 1257 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms