RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 MCM5P33992 734 aa22.76■■□□□ 1.23
BPTF-208ENST00000544778 PRPHP41219 470 aa22.76■■□□□ 1.23
BPTF-208ENST00000544778 ANKS4BQ8N8V4 417 aa22.76■■□□□ 1.23
BPTF-208ENST00000544778 SPDYE3A6NKU9 549 aa22.75■■□□□ 1.23
BPTF-208ENST00000544778 SATB1Q01826 763 aa22.75■■□□□ 1.23
BPTF-208ENST00000544778 TSHZ3Q63HK5 1081 aa22.75■■□□□ 1.23
BPTF-208ENST00000544778 CCDC25Q86WR0 208 aa22.75■■□□□ 1.23
BPTF-208ENST00000544778 ASIC1P78348 528 aa22.75■■□□□ 1.23
BPTF-208ENST00000544778 MKRN1Q9UHC7 482 aaKnown RBP22.75■■□□□ 1.23
BPTF-208ENST00000544778 TTC36A6NLP5 189 aa22.75■■□□□ 1.23
BPTF-208ENST00000544778 KRT23Q9C075 422 aa22.74■■□□□ 1.23
BPTF-208ENST00000544778 RBM27Q9P2N5 1060 aaKnown RBP22.74■■□□□ 1.23
BPTF-208ENST00000544778 BIRC2Q13490 618 aa22.74■■□□□ 1.23
BPTF-208ENST00000544778 RPUSD2Q8IZ73 545 aaKnown RBP22.74■■□□□ 1.23
BPTF-208ENST00000544778 LRRC9Q6ZRR7 1453 aa22.74■■□□□ 1.23
BPTF-208ENST00000544778 ZGPATQ8N5A5 531 aaKnown RBP22.74■■□□□ 1.23
BPTF-208ENST00000544778 B4DLN1 442 aa22.74■■□□□ 1.23
BPTF-208ENST00000544778 MRPL12P52815 198 aaKnown RBP22.74■■□□□ 1.23
BPTF-208ENST00000544778 STMN4Q9H169 189 aaPredicted RBP22.74■■□□□ 1.23
BPTF-208ENST00000544778 RTN1Q16799 776 aa22.73■■□□□ 1.23
BPTF-208ENST00000544778 ATRIPQ8WXE1 791 aa22.73■■□□□ 1.23
BPTF-208ENST00000544778 TEX13AQ9BXU3 409 aaPredicted RBP22.73■■□□□ 1.23
BPTF-208ENST00000544778 CTAGE1Q96RT6 745 aa22.73■■□□□ 1.23
BPTF-208ENST00000544778 ALG1Q9BT22 464 aa22.73■■□□□ 1.23
BPTF-208ENST00000544778 KLF18A0A0U1RQI7 1052 aa22.73■■□□□ 1.23
BPTF-208ENST00000544778 ZNF165P49910 485 aa22.73■■□□□ 1.23
BPTF-208ENST00000544778 ATP6V1AP38606 617 aa22.72■■□□□ 1.23
BPTF-208ENST00000544778 RNF34Q969K3 372 aa22.72■■□□□ 1.23
BPTF-208ENST00000544778 EPSTI1Q96J88 318 aa22.72■■□□□ 1.23
BPTF-208ENST00000544778 LRRC2Q9BYS8 371 aa22.72■■□□□ 1.23
BPTF-208ENST00000544778 ZBTB43O43298 467 aa22.72■■□□□ 1.23
BPTF-208ENST00000544778 KCNK9Q9NPC2 374 aa22.72■■□□□ 1.23
BPTF-208ENST00000544778 KIAA1524Q8TCG1 905 aa22.72■■□□□ 1.23
BPTF-208ENST00000544778 HFM1A2PYH4 1435 aa22.72■■□□□ 1.23
BPTF-208ENST00000544778 UAP1Q16222 522 aaPredicted RBP22.72■■□□□ 1.23
BPTF-208ENST00000544778 PPP1R7Q15435 360 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 NME9Q86XW9 330 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 MSANTD4Q8NCY6 345 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 SSH1Q8WYL5 1049 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 CAPZA3Q96KX2 299 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 GABPAQ06546 454 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 SLFN5Q08AF3 891 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 CCDC129Q6ZRS4 1044 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 TRIM7Q9C029 511 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 KRT5P13647 590 aa22.71■■□□□ 1.23
BPTF-208ENST00000544778 ATP2A2P16615 1042 aaKnown RBP22.71■■□□□ 1.23
BPTF-208ENST00000544778 C11orf95C9JLR9 678 aaPredicted RBP22.71■■□□□ 1.23
BPTF-208ENST00000544778 PRG4Q92954 1404 aaPredicted RBP22.71■■□□□ 1.23
BPTF-208ENST00000544778 DYNC1I1O14576 645 aa22.7■■□□□ 1.23
BPTF-208ENST00000544778 TRAF1Q13077 416 aa22.7■■□□□ 1.23
BPTF-208ENST00000544778 ECHDC1Q9NTX5 307 aa22.7■■□□□ 1.22
BPTF-208ENST00000544778 AGTPBP1Q9UPW5 1226 aa22.7■■□□□ 1.22
BPTF-208ENST00000544778 UQCRFS1P1P0C7P4 283 aa22.7■■□□□ 1.22
BPTF-208ENST00000544778 ALDH1L2Q3SY69 923 aa22.7■■□□□ 1.22
BPTF-208ENST00000544778 KRT28Q7Z3Y7 464 aa22.7■■□□□ 1.22
BPTF-208ENST00000544778 PPP1R21Q6ZMI0 780 aa22.7■■□□□ 1.22
BPTF-208ENST00000544778 PRPF31Q8WWY3 499 aaKnown RBP22.7■■□□□ 1.22
BPTF-208ENST00000544778 MCM6Q14566 821 aa22.7■■□□□ 1.22
BPTF-208ENST00000544778 ZNF804AQ7Z570 1209 aa22.69■■□□□ 1.22
BPTF-208ENST00000544778 LMBR1Q8WVP7 490 aa22.69■■□□□ 1.22
BPTF-208ENST00000544778 SEC62Q99442 399 aaKnown RBP22.69■■□□□ 1.22
BPTF-208ENST00000544778 ESR2Q92731 530 aa22.69■■□□□ 1.22
BPTF-208ENST00000544778 KIFC2Q96AC6 838 aa22.69■■□□□ 1.22
BPTF-208ENST00000544778 MARCKSP29966 332 aaPredicted RBP22.69■■□□□ 1.22
BPTF-208ENST00000544778 GIMAP6Q6P9H5 292 aa22.69■■□□□ 1.22
BPTF-208ENST00000544778 ATP6V0A2Q9Y487 856 aa22.69■■□□□ 1.22
BPTF-208ENST00000544778 LRPPRCP42704 1394 aaKnown RBP22.69■■□□□ 1.22
BPTF-208ENST00000544778 BACH1O14867 736 aa22.69■■□□□ 1.22
BPTF-208ENST00000544778 NAA16Q6N069 864 aaPredicted RBP22.69■■□□□ 1.22
BPTF-208ENST00000544778 TNPO1Q92973 898 aaKnown RBP22.69■■□□□ 1.22
BPTF-208ENST00000544778 KIF5AQ12840 1032 aa22.68■■□□□ 1.22
BPTF-208ENST00000544778 RIMBP2O15034 1052 aa22.68■■□□□ 1.22
BPTF-208ENST00000544778 NECAB1Q8N987 351 aa22.68■■□□□ 1.22
BPTF-208ENST00000544778 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
BPTF-208ENST00000544778 HARSP12081 509 aaKnown RBP22.68■■□□□ 1.22
BPTF-208ENST00000544778 RRP36Q96EU6 259 aaKnown RBP22.68■■□□□ 1.22
BPTF-208ENST00000544778 FLIIQ13045 1269 aa22.68■■□□□ 1.22
BPTF-208ENST00000544778 TMCO4Q5TGY1 634 aa22.68■■□□□ 1.22
BPTF-208ENST00000544778 CTAGE9A4FU28 777 aa22.68■■□□□ 1.22
BPTF-208ENST00000544778 TACC1O75410 805 aa22.68■■□□□ 1.22
BPTF-208ENST00000544778 KRT9P35527 623 aa22.68■■□□□ 1.22
BPTF-208ENST00000544778 PTPRCP08575 1304 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 CTAGE15A4D2H0 777 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 CTAGE8P0CG41 777 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 CTAGE6Q86UF2 777 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 CTAGE4Q8IX94 777 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 PKD2L1Q9P0L9 805 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 RSPH14Q9UHP6 348 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 E7EVH7 732 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 PSMA7O14818 248 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 LMOD1P29536 600 aaPredicted RBP22.67■■□□□ 1.22
BPTF-208ENST00000544778 DHX58Q96C10 678 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 KIAA1107Q9UPP5 1409 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 IRX5P78411 483 aaPredicted RBP22.67■■□□□ 1.22
BPTF-208ENST00000544778 IFNL2Q8IZJ0 200 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 NOD1Q9Y239 953 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 CFTRP13569 1480 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 UBE2HP62256 183 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 PPP2R5CQ13362 524 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 IFT81Q8WYA0 676 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms