RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 CCDC30Q5VVM6 783 aa17.93■□□□□ 0.46
SEMA4D-224ENST00000544513 PAXIP1Q6ZW49 1069 aaPredicted RBP17.93■□□□□ 0.46
SEMA4D-224ENST00000544513 SAMD7Q7Z3H4 446 aa17.93■□□□□ 0.46
SEMA4D-224ENST00000544513 CWC25Q9NXE8 425 aaPredicted RBP17.93■□□□□ 0.46
SEMA4D-224ENST00000544513 PDE8AO60658 829 aa17.92■□□□□ 0.46
SEMA4D-224ENST00000544513 AOC2O75106 756 aa17.92■□□□□ 0.46
SEMA4D-224ENST00000544513 EGFRP00533 1210 aa17.92■□□□□ 0.46
SEMA4D-224ENST00000544513 DOK7Q18PE1 504 aa17.92■□□□□ 0.46
SEMA4D-224ENST00000544513 CCDC152Q4G0S7 254 aa17.92■□□□□ 0.46
SEMA4D-224ENST00000544513 TSPYL6Q8N831 410 aa17.92■□□□□ 0.46
SEMA4D-224ENST00000544513 SCN9AQ15858 1988 aa17.91■□□□□ 0.46
SEMA4D-224ENST00000544513 DDX58O95786 925 aaKnown RBP17.91■□□□□ 0.46
SEMA4D-224ENST00000544513 VIL1P09327 827 aaKnown RBP17.91■□□□□ 0.46
SEMA4D-224ENST00000544513 GRM1Q13255 1194 aa17.91■□□□□ 0.46
SEMA4D-224ENST00000544513 USP48Q86UV5 1035 aa17.91■□□□□ 0.46
SEMA4D-224ENST00000544513 ZNF609O15014 1411 aa17.9■□□□□ 0.46
SEMA4D-224ENST00000544513 CCDC27Q2M243 656 aa17.9■□□□□ 0.46
SEMA4D-224ENST00000544513 TBC1D10BQ4KMP7 808 aaPredicted RBP17.9■□□□□ 0.46
SEMA4D-224ENST00000544513 JARID2Q92833 1246 aaPredicted RBP17.9■□□□□ 0.46
SEMA4D-224ENST00000544513 BEGAINQ9BUH8 593 aa17.9■□□□□ 0.46
SEMA4D-224ENST00000544513 ZC3H12CQ9C0D7 883 aaKnown RBP17.9■□□□□ 0.46
SEMA4D-224ENST00000544513 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
SEMA4D-224ENST00000544513 UFL1O94874 794 aa17.89■□□□□ 0.45
SEMA4D-224ENST00000544513 IGKV5-2P06315 115 aa17.89■□□□□ 0.45
SEMA4D-224ENST00000544513 DLK2Q6UY11 383 aa17.89■□□□□ 0.45
SEMA4D-224ENST00000544513 KSR2Q6VAB6 950 aa17.89■□□□□ 0.45
SEMA4D-224ENST00000544513 GGA1Q9UJY5 639 aa17.89■□□□□ 0.45
SEMA4D-224ENST00000544513 MAP3K2Q9Y2U5 619 aa17.89■□□□□ 0.45
SEMA4D-224ENST00000544513 BRPF1P55201 1214 aaPredicted RBP17.88■□□□□ 0.45
SEMA4D-224ENST00000544513 CCDC184Q52MB2 194 aa17.88■□□□□ 0.45
SEMA4D-224ENST00000544513 KRT26Q7Z3Y9 468 aa17.88■□□□□ 0.45
SEMA4D-224ENST00000544513 ZNF408Q9H9D4 720 aa17.88■□□□□ 0.45
SEMA4D-224ENST00000544513 POLR2AP24928 1970 aaKnown RBP17.88■□□□□ 0.45
SEMA4D-224ENST00000544513 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
SEMA4D-224ENST00000544513 CA12O43570 354 aa17.87■□□□□ 0.45
SEMA4D-224ENST00000544513 ZNF280AP59817 542 aaPredicted RBP17.87■□□□□ 0.45
SEMA4D-224ENST00000544513 WWC1Q8IX03 1113 aa17.87■□□□□ 0.45
SEMA4D-224ENST00000544513 PI4KAP1Q8N8J0 262 aa17.87■□□□□ 0.45
SEMA4D-224ENST00000544513 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
SEMA4D-224ENST00000544513 ABHD8Q96I13 439 aa17.87■□□□□ 0.45
SEMA4D-224ENST00000544513 GMLQ99445 158 aa17.87■□□□□ 0.45
SEMA4D-224ENST00000544513 XDHP47989 1333 aa17.87■□□□□ 0.45
SEMA4D-224ENST00000544513 CTSWP56202 376 aa17.86■□□□□ 0.45
SEMA4D-224ENST00000544513 HUNKP57058 714 aa17.86■□□□□ 0.45
SEMA4D-224ENST00000544513 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
SEMA4D-224ENST00000544513 ANKRD18AQ8IVF6 992 aa17.86■□□□□ 0.45
SEMA4D-224ENST00000544513 AGBL3Q8NEM8 1001 aa17.86■□□□□ 0.45
SEMA4D-224ENST00000544513 TTLL11Q8NHH1 800 aa17.86■□□□□ 0.45
SEMA4D-224ENST00000544513 CCDC85AQ96PX6 553 aaPredicted RBP17.86■□□□□ 0.45
SEMA4D-224ENST00000544513 ADM5C9JUS6 153 aa17.85■□□□□ 0.45
SEMA4D-224ENST00000544513 NOGQ13253 232 aa17.85■□□□□ 0.45
SEMA4D-224ENST00000544513 IL16Q14005 1332 aa17.85■□□□□ 0.45
SEMA4D-224ENST00000544513 KIF4BQ2VIQ3 1234 aa17.85■□□□□ 0.45
SEMA4D-224ENST00000544513 RSBN1LQ6PCB5 846 aaPredicted RBP17.85■□□□□ 0.45
SEMA4D-224ENST00000544513 DCPSQ96C86 337 aaKnown RBP17.85■□□□□ 0.45
SEMA4D-224ENST00000544513 ZIC5Q96T25 663 aa17.85■□□□□ 0.45
SEMA4D-224ENST00000544513 PSME4Q14997 1843 aa17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 WTIPA6NIX2 430 aaPredicted RBP17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 NEURL1BA8MQ27 555 aa17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 FAM155AB1AL88 458 aaPredicted RBP17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 ATP2B4P23634 1241 aa17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 RBM26Q5T8P6 1007 aaKnown RBP17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 CDC5LQ99459 802 aaKnown RBP17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 STK31Q9BXU1 1019 aa17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 GBA2Q9HCG7 927 aaPredicted RBP17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 BSDC1Q9NW68 430 aaPredicted RBP17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 TSKSQ9UJT2 592 aa17.84■□□□□ 0.45
SEMA4D-224ENST00000544513 ASTN2O75129 1339 aaPredicted RBP17.83■□□□□ 0.44
SEMA4D-224ENST00000544513 G2E3Q7L622 706 aa17.83■□□□□ 0.44
SEMA4D-224ENST00000544513 PODNQ7Z5L7 613 aa17.83■□□□□ 0.44
SEMA4D-224ENST00000544513 GREM2Q9H772 168 aa17.83■□□□□ 0.44
SEMA4D-224ENST00000544513 MINPP1Q9UNW1 487 aa17.83■□□□□ 0.44
SEMA4D-224ENST00000544513 G3V3G9 751 aa17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 H7C1W4 665 aa17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 NEXNQ0ZGT2 675 aa17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 TWISTNBQ3B726 338 aaPredicted RBP17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 RGMBQ6NW40 437 aa17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 C2orf69Q8N8R5 385 aa17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 GGA3Q9NZ52 723 aa17.82■□□□□ 0.44
SEMA4D-224ENST00000544513 MED23Q9ULK4 1368 aa17.81■□□□□ 0.44
SEMA4D-224ENST00000544513 MYH3P11055 1940 aa17.81■□□□□ 0.44
SEMA4D-224ENST00000544513 USP17L3A6NCW0 530 aa17.81■□□□□ 0.44
SEMA4D-224ENST00000544513 USP17L4A6NCW7 530 aa17.81■□□□□ 0.44
SEMA4D-224ENST00000544513 USP17L8P0C7I0 530 aa17.81■□□□□ 0.44
SEMA4D-224ENST00000544513 SCARF1Q14162 830 aa17.81■□□□□ 0.44
SEMA4D-224ENST00000544513 USP17L1Q7RTZ2 530 aa17.81■□□□□ 0.44
SEMA4D-224ENST00000544513 SULF1Q8IWU6 871 aa17.81■□□□□ 0.44
SEMA4D-224ENST00000544513 PLA2G12BQ9BX93 195 aa17.81■□□□□ 0.44
SEMA4D-224ENST00000544513 GCKRQ14397 625 aa17.8■□□□□ 0.44
SEMA4D-224ENST00000544513 CCDC102AQ96A19 550 aa17.8■□□□□ 0.44
SEMA4D-224ENST00000544513 CASP7P55210 303 aa17.79■□□□□ 0.44
SEMA4D-224ENST00000544513 ANGEL2Q5VTE6 544 aaKnown RBP17.79■□□□□ 0.44
SEMA4D-224ENST00000544513 UBE3BQ7Z3V4 1068 aa17.79■□□□□ 0.44
SEMA4D-224ENST00000544513 CDCA5Q96FF9 252 aa17.79■□□□□ 0.44
SEMA4D-224ENST00000544513 MYOZ2Q9NPC6 264 aa17.79■□□□□ 0.44
SEMA4D-224ENST00000544513 CASP8AP2Q9UKL3 1982 aa17.79■□□□□ 0.44
SEMA4D-224ENST00000544513 PITPNM2Q9BZ72 1349 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms