RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 SCARF1Q14162 830 aa14.91□□□□□ -0.02
AP000439.1-201ENST00000544004 MOB2Q70IA6 237 aa14.91□□□□□ -0.02
AP000439.1-201ENST00000544004 ZNF428Q96B54 188 aa14.91□□□□□ -0.02
AP000439.1-201ENST00000544004 EYA3Q99504 573 aa14.91□□□□□ -0.02
AP000439.1-201ENST00000544004 NEFMP07197 916 aa14.9□□□□□ -0.02
AP000439.1-201ENST00000544004 VIL1P09327 827 aaKnown RBP14.9□□□□□ -0.02
AP000439.1-201ENST00000544004 AIMP1Q12904 312 aaKnown RBP14.9□□□□□ -0.02
AP000439.1-201ENST00000544004 TCIRG1Q13488 830 aa14.9□□□□□ -0.02
AP000439.1-201ENST00000544004 NOM1Q5C9Z4 860 aaKnown RBP14.9□□□□□ -0.02
AP000439.1-201ENST00000544004 COPS6Q7L5N1 327 aa14.9□□□□□ -0.02
AP000439.1-201ENST00000544004 MKI67P46013 3256 aaKnown RBP14.9□□□□□ -0.02
AP000439.1-201ENST00000544004 UBE2Q2LH0YL09 131 aa14.89□□□□□ -0.03
AP000439.1-201ENST00000544004 PPP2R1AP30153 589 aa14.89□□□□□ -0.03
AP000439.1-201ENST00000544004 TM4SF4P48230 202 aa14.89□□□□□ -0.03
AP000439.1-201ENST00000544004 COL4A1P02462 1669 aa14.89□□□□□ -0.03
AP000439.1-201ENST00000544004 FKTNO75072 461 aa14.88□□□□□ -0.03
AP000439.1-201ENST00000544004 ZNF280AP59817 542 aaPredicted RBP14.88□□□□□ -0.03
AP000439.1-201ENST00000544004 TBC1D16Q8TBP0 767 aa14.88□□□□□ -0.03
AP000439.1-201ENST00000544004 XAGE3Q8WTP9 111 aa14.88□□□□□ -0.03
AP000439.1-201ENST00000544004 ZC3H12CQ9C0D7 883 aaKnown RBP14.88□□□□□ -0.03
AP000439.1-201ENST00000544004 SCAF8Q9UPN6 1271 aaKnown RBP14.88□□□□□ -0.03
AP000439.1-201ENST00000544004 G3V3G9 751 aa14.87□□□□□ -0.03
AP000439.1-201ENST00000544004 MKRN3Q13064 507 aaKnown RBP14.87□□□□□ -0.03
AP000439.1-201ENST00000544004 SF3B3Q15393 1217 aaKnown RBP14.87□□□□□ -0.03
AP000439.1-201ENST00000544004 DCAF8Q5TAQ9 597 aa14.87□□□□□ -0.03
AP000439.1-201ENST00000544004 TSPYL4Q9UJ04 414 aa14.87□□□□□ -0.03
AP000439.1-201ENST00000544004 PSME4Q14997 1843 aa14.87□□□□□ -0.03
AP000439.1-201ENST00000544004 POTEFA5A3E0 1075 aa14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 FXR1P51114 621 aaKnown RBP eCLIP14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 TTLL12Q14166 644 aaPredicted RBP14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 NFE2L2Q16236 605 aa14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 PRAMEF18Q5VWM3 479 aa14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 RSBN1LQ6PCB5 846 aaPredicted RBP14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 AGBL3Q8NEM8 1001 aa14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 NECTIN2Q92692 538 aa14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 R3HDMLQ9H3Y0 253 aa14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 MYOZ2Q9NPC6 264 aa14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 PITPNM2Q9BZ72 1349 aa14.86□□□□□ -0.03
AP000439.1-201ENST00000544004 FAM89AQ96GI7 184 aa14.85□□□□□ -0.03
AP000439.1-201ENST00000544004 ZNF609O15014 1411 aa14.84□□□□□ -0.03
AP000439.1-201ENST00000544004 RBBP6Q7Z6E9 1792 aaKnown RBP14.84□□□□□ -0.03
AP000439.1-201ENST00000544004 USP17L8P0C7I0 530 aa14.84□□□□□ -0.03
AP000439.1-201ENST00000544004 RPS8P62241 208 aaKnown RBP14.84□□□□□ -0.03
AP000439.1-201ENST00000544004 SREBF2Q12772 1141 aa14.84□□□□□ -0.03
AP000439.1-201ENST00000544004 INTS3Q68E01 1043 aaKnown RBP14.84□□□□□ -0.03
AP000439.1-201ENST00000544004 PLEKHF1Q96S99 279 aa14.84□□□□□ -0.03
AP000439.1-201ENST00000544004 CFHR5Q9BXR6 569 aa14.84□□□□□ -0.03
AP000439.1-201ENST00000544004 UFL1O94874 794 aa14.83□□□□□ -0.04
AP000439.1-201ENST00000544004 PODXL2Q9NZ53 605 aa14.83□□□□□ -0.04
AP000439.1-201ENST00000544004 TRIM17Q9Y577 477 aa14.83□□□□□ -0.04
AP000439.1-201ENST00000544004 CENPFP49454 3210 aa14.83□□□□□ -0.04
AP000439.1-201ENST00000544004 RTL5Q5HYW3 569 aaPredicted RBP14.82□□□□□ -0.04
AP000439.1-201ENST00000544004 GMLQ99445 158 aa14.82□□□□□ -0.04
AP000439.1-201ENST00000544004 ANKIB1Q9P2G1 1089 aa14.82□□□□□ -0.04
AP000439.1-201ENST00000544004 HTTP42858 3142 aa14.82□□□□□ -0.04
AP000439.1-201ENST00000544004 ATP5J2-PTCD1G3V325 749 aa14.81□□□□□ -0.04
AP000439.1-201ENST00000544004 NF2P35240 595 aa14.81□□□□□ -0.04
AP000439.1-201ENST00000544004 PTPN12Q05209 780 aaKnown RBP14.81□□□□□ -0.04
AP000439.1-201ENST00000544004 NBPF9Q3BBW0 867 aa14.81□□□□□ -0.04
AP000439.1-201ENST00000544004 ISCA1Q9BUE6 129 aa14.81□□□□□ -0.04
AP000439.1-201ENST00000544004 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
AP000439.1-201ENST00000544004 BRCA2P51587 3418 aa14.8□□□□□ -0.04
AP000439.1-201ENST00000544004 IRS4O14654 1257 aaPredicted RBP14.8□□□□□ -0.04
AP000439.1-201ENST00000544004 OTOP1Q7RTM1 612 aa14.8□□□□□ -0.04
AP000439.1-201ENST00000544004 MAPK8IP3Q9UPT6 1336 aa14.8□□□□□ -0.04
AP000439.1-201ENST00000544004 USP17L3A6NCW0 530 aa14.79□□□□□ -0.04
AP000439.1-201ENST00000544004 USP17L4A6NCW7 530 aa14.79□□□□□ -0.04
AP000439.1-201ENST00000544004 ALDH1A1P00352 501 aa14.79□□□□□ -0.04
AP000439.1-201ENST00000544004 EN2P19622 333 aaPredicted RBP14.79□□□□□ -0.04
AP000439.1-201ENST00000544004 PRKG1Q13976 671 aa14.79□□□□□ -0.04
AP000439.1-201ENST00000544004 ANKRD13DQ6ZTN6 518 aa14.79□□□□□ -0.04
AP000439.1-201ENST00000544004 USP17L1Q7RTZ2 530 aa14.79□□□□□ -0.04
AP000439.1-201ENST00000544004 PLBD2Q8NHP8 589 aa14.79□□□□□ -0.04
AP000439.1-201ENST00000544004 SEC31BQ9NQW1 1179 aa14.79□□□□□ -0.04
AP000439.1-201ENST00000544004 SPRYD7Q5W111 196 aa14.78□□□□□ -0.04
AP000439.1-201ENST00000544004 ARMC9Q7Z3E5 817 aa14.78□□□□□ -0.04
AP000439.1-201ENST00000544004 PODNQ7Z5L7 613 aa14.78□□□□□ -0.04
AP000439.1-201ENST00000544004 BABAM1Q9NWV8 329 aa14.78□□□□□ -0.04
AP000439.1-201ENST00000544004 CHPF2Q9P2E5 772 aa14.78□□□□□ -0.04
AP000439.1-201ENST00000544004 COLQQ9Y215 455 aaPredicted RBP14.78□□□□□ -0.04
AP000439.1-201ENST00000544004 WNT10BO00744 389 aa14.77□□□□□ -0.05
AP000439.1-201ENST00000544004 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.05
AP000439.1-201ENST00000544004 PNNQ9H307 717 aaKnown RBP14.77□□□□□ -0.05
AP000439.1-201ENST00000544004 PTPN22Q9Y2R2 807 aa14.77□□□□□ -0.05
AP000439.1-201ENST00000544004 KIAA0100Q14667 2235 aaKnown RBP14.76□□□□□ -0.05
AP000439.1-201ENST00000544004 KRT24Q2M2I5 525 aa14.76□□□□□ -0.05
AP000439.1-201ENST00000544004 LDLRAD1Q5T700 205 aa14.76□□□□□ -0.05
AP000439.1-201ENST00000544004 IFNL1Q8IU54 200 aa14.76□□□□□ -0.05
AP000439.1-201ENST00000544004 OGFOD1Q8N543 542 aa14.76□□□□□ -0.05
AP000439.1-201ENST00000544004 MXD3Q9BW11 206 aa14.76□□□□□ -0.05
AP000439.1-201ENST00000544004 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.76□□□□□ -0.05
AP000439.1-201ENST00000544004 ANGEL1Q9UNK9 670 aaKnown RBP14.76□□□□□ -0.05
AP000439.1-201ENST00000544004 ZNF646O15015 1829 aaPredicted RBP14.76□□□□□ -0.05
AP000439.1-201ENST00000544004 XDHP47989 1333 aa14.75□□□□□ -0.05
AP000439.1-201ENST00000544004 MANSC4A6NHS7 340 aaPredicted RBP14.75□□□□□ -0.05
AP000439.1-201ENST00000544004 RIPK4P57078 832 aa14.75□□□□□ -0.05
AP000439.1-201ENST00000544004 INHBEP58166 350 aa14.75□□□□□ -0.05
AP000439.1-201ENST00000544004 ARMC5Q96C12 935 aa14.75□□□□□ -0.05
AP000439.1-201ENST00000544004 ERO1AQ96HE7 468 aa14.75□□□□□ -0.05
AP000439.1-201ENST00000544004 FZD1Q9UP38 647 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms