RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 AAMPQ13685 434 aa18■□□□□ 0.47
TNFRSF1A-216ENST00000543995 MPNDQ8N594 471 aa18■□□□□ 0.47
TNFRSF1A-216ENST00000543995 PUS3Q9BZE2 481 aaKnown RBP18■□□□□ 0.47
TNFRSF1A-216ENST00000543995 ANKIB1Q9P2G1 1089 aa18■□□□□ 0.47
TNFRSF1A-216ENST00000543995 MINPP1Q9UNW1 487 aa18■□□□□ 0.47
TNFRSF1A-216ENST00000543995 NSFL1CQ9UNZ2 370 aaKnown RBP18■□□□□ 0.47
TNFRSF1A-216ENST00000543995 FER1L6Q2WGJ9 1857 aa17.99■□□□□ 0.47
TNFRSF1A-216ENST00000543995 POLA2Q14181 598 aa17.99■□□□□ 0.47
TNFRSF1A-216ENST00000543995 GRIPAP1Q4V328 841 aa17.99■□□□□ 0.47
TNFRSF1A-216ENST00000543995 DPP8Q6V1X1 898 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-216ENST00000543995 SSH3Q8TE77 659 aa17.99■□□□□ 0.47
TNFRSF1A-216ENST00000543995 GPSM2P81274 684 aa17.98■□□□□ 0.47
TNFRSF1A-216ENST00000543995 CHRNDQ07001 517 aa17.98■□□□□ 0.47
TNFRSF1A-216ENST00000543995 LRRC24Q50LG9 513 aa17.98■□□□□ 0.47
TNFRSF1A-216ENST00000543995 COPRSQ9NQ92 184 aa17.98■□□□□ 0.47
TNFRSF1A-216ENST00000543995 GOLGB1Q14789 3259 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-216ENST00000543995 EYA2O00167 538 aa17.98■□□□□ 0.47
TNFRSF1A-216ENST00000543995 ANKRD2Q9GZV1 360 aa17.98■□□□□ 0.47
TNFRSF1A-216ENST00000543995 TAOK3Q9H2K8 898 aa17.98■□□□□ 0.47
TNFRSF1A-216ENST00000543995 XDHP47989 1333 aa17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 SURF6O75683 361 aaKnown RBP17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 G3BP1Q13283 466 aaKnown RBP eCLIP17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 OS9Q13438 667 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 METTL24Q5JXM2 366 aa17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 SIRT2Q8IXJ6 389 aa17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 HELBQ8NG08 1087 aaPredicted RBP17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 FBXO3Q9UK99 471 aa17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 RIPOR2Q9Y4F9 1068 aa17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
TNFRSF1A-216ENST00000543995 MROH5Q6ZUA9 1318 aa17.96■□□□□ 0.47
TNFRSF1A-216ENST00000543995 A0A1B0GUL6 1792 aa17.96■□□□□ 0.47
TNFRSF1A-216ENST00000543995 CIAO1O76071 339 aa17.96■□□□□ 0.47
TNFRSF1A-216ENST00000543995 FKBP4Q02790 459 aaKnown RBP eCLIP17.96■□□□□ 0.47
TNFRSF1A-216ENST00000543995 RASSF7Q02833 373 aa17.96■□□□□ 0.47
TNFRSF1A-216ENST00000543995 C6orf229H3BNL8 230 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 NFKBIEO00221 500 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 TAF5LO75529 589 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 UFL1O94874 794 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 IL15P40933 162 aaPredicted RBP17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 KCNJ4P48050 445 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 SUPT20HQ8NEM7 779 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 PSMD1Q99460 953 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 PODXL2Q9NZ53 605 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 GGA1Q9UJY5 639 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 SNED1Q8TER0 1413 aa17.95■□□□□ 0.46
TNFRSF1A-216ENST00000543995 ATG9AQ7Z3C6 839 aa17.94■□□□□ 0.46
TNFRSF1A-216ENST00000543995 LTBP1Q14766 1721 aa17.94■□□□□ 0.46
TNFRSF1A-216ENST00000543995 ATP2B4P23634 1241 aa17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 TBC1D16Q8TBP0 767 aa17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 CEP126Q9P2H0 1117 aa17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 LTBP3Q9NS15 1303 aa17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 SBF1O95248 1867 aa17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 RTFDC1Q9BY42 306 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 ZNF277Q9NRM2 450 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 POLLQ9UGP5 575 aa17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 LEMD3Q9Y2U8 911 aa17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 NOP58Q9Y2X3 529 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1A-216ENST00000543995 ZNF804BA4D1E1 1349 aa17.92■□□□□ 0.46
TNFRSF1A-216ENST00000543995 DUOX1Q9NRD9 1551 aa17.92■□□□□ 0.46
TNFRSF1A-216ENST00000543995 PDE8BO95263 885 aa17.92■□□□□ 0.46
TNFRSF1A-216ENST00000543995 EYA3Q99504 573 aa17.92■□□□□ 0.46
TNFRSF1A-216ENST00000543995 PPIP5K2O43314 1243 aa17.91■□□□□ 0.46
TNFRSF1A-216ENST00000543995 LMNB1P20700 586 aa17.91■□□□□ 0.46
TNFRSF1A-216ENST00000543995 IARSP41252 1262 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-216ENST00000543995 WASHC4Q2M389 1173 aa17.91■□□□□ 0.46
TNFRSF1A-216ENST00000543995 HSP90AB4PQ58FF6 505 aa17.91■□□□□ 0.46
TNFRSF1A-216ENST00000543995 GPR101Q96P66 508 aaPredicted RBP17.91■□□□□ 0.46
TNFRSF1A-216ENST00000543995 WTIPA6NIX2 430 aaPredicted RBP17.9■□□□□ 0.46
TNFRSF1A-216ENST00000543995 SNAP23O00161 211 aa17.9■□□□□ 0.46
TNFRSF1A-216ENST00000543995 APBB1O00213 710 aa17.9■□□□□ 0.46
TNFRSF1A-216ENST00000543995 RIMBP2O15034 1052 aa17.9■□□□□ 0.46
TNFRSF1A-216ENST00000543995 TFCP2Q12800 502 aa17.9■□□□□ 0.46
TNFRSF1A-216ENST00000543995 AOC3Q16853 763 aa17.9■□□□□ 0.46
TNFRSF1A-216ENST00000543995 VGLL2Q8N8G2 317 aa17.9■□□□□ 0.46
TNFRSF1A-216ENST00000543995 ZC3H12CQ9C0D7 883 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1A-216ENST00000543995 UBE4AQ14139 1066 aa17.89■□□□□ 0.45
TNFRSF1A-216ENST00000543995 PUM3Q15397 648 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1A-216ENST00000543995 ERC1Q8IUD2 1116 aa17.89■□□□□ 0.45
TNFRSF1A-216ENST00000543995 LARGE2Q8N3Y3 721 aa17.89■□□□□ 0.45
TNFRSF1A-216ENST00000543995 G3V3G9 751 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 SASH1O94885 1247 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 DCAF8Q5TAQ9 597 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 VPS33BQ9H267 617 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 RWDD1Q9H446 243 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 RNF181Q9P0P0 153 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 AKAP2Q9Y2D5 859 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 RAB11FIP3O75154 756 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 PRELPP51888 382 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 KIAA2012Q0VF49 1180 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 HDAC1Q13547 482 aaPredicted RBP17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 ATP2B3Q16720 1220 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 DCTPP1Q9H773 170 aa17.88■□□□□ 0.45
TNFRSF1A-216ENST00000543995 CHD4Q14839 1912 aa17.87■□□□□ 0.45
TNFRSF1A-216ENST00000543995 MED23Q9ULK4 1368 aa17.87■□□□□ 0.45
TNFRSF1A-216ENST00000543995 IFIT1P09914 478 aaKnown RBP17.87■□□□□ 0.45
TNFRSF1A-216ENST00000543995 SLC5A1P13866 664 aa17.87■□□□□ 0.45
TNFRSF1A-216ENST00000543995 C9orf131Q5VYM1 1079 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms