RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 IFIT5Q13325 482 aaKnown RBP27.44■■□□□ 1.98
OTUB1-212ENST00000543988 XDHP47989 1333 aa27.43■■□□□ 1.98
OTUB1-212ENST00000543988 ANKRD44Q8N8A2 993 aa27.43■■□□□ 1.98
OTUB1-212ENST00000543988 RRAGCQ9HB90 399 aa27.43■■□□□ 1.98
OTUB1-212ENST00000543988 GGA1Q9UJY5 639 aa27.43■■□□□ 1.98
OTUB1-212ENST00000543988 MINPP1Q9UNW1 487 aa27.43■■□□□ 1.98
OTUB1-212ENST00000543988 RABL6Q3YEC7 729 aaPredicted RBP27.42■■□□□ 1.98
OTUB1-212ENST00000543988 INTS3Q68E01 1043 aaKnown RBP27.42■■□□□ 1.98
OTUB1-212ENST00000543988 MPHOSPH8Q99549 860 aa27.41■■□□□ 1.98
OTUB1-212ENST00000543988 SPEF2Q9C093 1822 aa27.4■■□□□ 1.98
OTUB1-212ENST00000543988 EIF6P56537 245 aaKnown RBP27.4■■□□□ 1.98
OTUB1-212ENST00000543988 WASHC4Q2M389 1173 aa27.4■■□□□ 1.98
OTUB1-212ENST00000543988 CCDC57Q2TAC2 916 aa27.4■■□□□ 1.98
OTUB1-212ENST00000543988 ZKSCAN2Q63HK3 967 aa27.4■■□□□ 1.98
OTUB1-212ENST00000543988 CLUAP1Q96AJ1 413 aa27.4■■□□□ 1.98
OTUB1-212ENST00000543988 WDR90Q96KV7 1748 aa27.39■■□□□ 1.98
OTUB1-212ENST00000543988 RIMBP2O15034 1052 aa27.39■■□□□ 1.98
OTUB1-212ENST00000543988 UBTFL1P0CB47 393 aaPredicted RBP27.39■■□□□ 1.98
OTUB1-212ENST00000543988 ZNF594Q96JF6 807 aaPredicted RBP27.39■■□□□ 1.98
OTUB1-212ENST00000543988 EYA3Q99504 573 aa27.39■■□□□ 1.98
OTUB1-212ENST00000543988 MEIS3Q99687 375 aa27.39■■□□□ 1.98
OTUB1-212ENST00000543988 ZNRF3Q9ULT6 936 aa27.39■■□□□ 1.98
OTUB1-212ENST00000543988 WTIPA6NIX2 430 aaPredicted RBP27.38■■□□□ 1.97
OTUB1-212ENST00000543988 POTECB2RU33 542 aa27.38■■□□□ 1.97
OTUB1-212ENST00000543988 L3MBTL3Q96JM7 780 aaPredicted RBP27.38■■□□□ 1.97
OTUB1-212ENST00000543988 VEGFAP15692 232 aaPredicted RBP27.37■■□□□ 1.97
OTUB1-212ENST00000543988 ATP2B4P23634 1241 aa27.37■■□□□ 1.97
OTUB1-212ENST00000543988 TAF7LQ5H9L4 462 aa27.37■■□□□ 1.97
OTUB1-212ENST00000543988 GPC2Q8N158 579 aa27.37■■□□□ 1.97
OTUB1-212ENST00000543988 DBNDD1Q9H9R9 158 aa27.36■■□□□ 1.97
OTUB1-212ENST00000543988 GJA3Q9Y6H8 435 aa27.36■■□□□ 1.97
OTUB1-212ENST00000543988 YDJCA8MPS7 323 aa27.35■■□□□ 1.97
OTUB1-212ENST00000543988 C1QTNF8P60827 252 aa27.35■■□□□ 1.97
OTUB1-212ENST00000543988 CHRNDQ07001 517 aa27.35■■□□□ 1.97
OTUB1-212ENST00000543988 CXCL9Q07325 125 aa27.34■■□□□ 1.97
OTUB1-212ENST00000543988 DOK7Q18PE1 504 aa27.34■■□□□ 1.97
OTUB1-212ENST00000543988 TMEM57Q8N5G2 664 aa27.34■■□□□ 1.97
OTUB1-212ENST00000543988 ZC3H12CQ9C0D7 883 aaKnown RBP27.34■■□□□ 1.97
OTUB1-212ENST00000543988 ANKRD2Q9GZV1 360 aa27.34■■□□□ 1.97
OTUB1-212ENST00000543988 LRRFIP2Q9Y608 721 aaKnown RBP27.34■■□□□ 1.97
OTUB1-212ENST00000543988 LDHAL6AQ6ZMR3 332 aa27.33■■□□□ 1.97
OTUB1-212ENST00000543988 YTHDC1Q96MU7 727 aaKnown RBP27.33■■□□□ 1.97
OTUB1-212ENST00000543988 ECE2O60344 883 aa27.32■■□□□ 1.96
OTUB1-212ENST00000543988 RAD17O75943 681 aa27.32■■□□□ 1.96
OTUB1-212ENST00000543988 TOMM70O94826 608 aa27.32■■□□□ 1.96
OTUB1-212ENST00000543988 C16orf71Q8IYS4 520 aaPredicted RBP27.32■■□□□ 1.96
OTUB1-212ENST00000543988 CNNM1Q9NRU3 951 aa27.32■■□□□ 1.96
OTUB1-212ENST00000543988 MED23Q9ULK4 1368 aa27.32■■□□□ 1.96
OTUB1-212ENST00000543988 RLBP1P12271 317 aa27.31■■□□□ 1.96
OTUB1-212ENST00000543988 CIAPIN1Q6FI81 312 aa27.31■■□□□ 1.96
OTUB1-212ENST00000543988 FTSJ3Q8IY81 847 aaKnown RBP27.31■■□□□ 1.96
OTUB1-212ENST00000543988 HELBQ8NG08 1087 aaPredicted RBP27.31■■□□□ 1.96
OTUB1-212ENST00000543988 PUS3Q9BZE2 481 aaKnown RBP27.31■■□□□ 1.96
OTUB1-212ENST00000543988 RCAN3Q9UKA8 241 aa27.31■■□□□ 1.96
OTUB1-212ENST00000543988 LEMD3Q9Y2U8 911 aa27.31■■□□□ 1.96
OTUB1-212ENST00000543988 IQCA1LA6NCM1 817 aa27.3■■□□□ 1.96
OTUB1-212ENST00000543988 GNAI3P08754 354 aa27.3■■□□□ 1.96
OTUB1-212ENST00000543988 KLRK1P26718 216 aa27.3■■□□□ 1.96
OTUB1-212ENST00000543988 DZIP1LQ8IYY4 767 aaKnown RBP27.3■■□□□ 1.96
OTUB1-212ENST00000543988 ZNF804BA4D1E1 1349 aa27.3■■□□□ 1.96
OTUB1-212ENST00000543988 TAF5LO75529 589 aa27.29■■□□□ 1.96
OTUB1-212ENST00000543988 KLHDC4Q8TBB5 520 aa27.29■■□□□ 1.96
OTUB1-212ENST00000543988 HACL1Q9UJ83 578 aa27.29■■□□□ 1.96
OTUB1-212ENST00000543988 SNAP23O00161 211 aa27.28■■□□□ 1.96
OTUB1-212ENST00000543988 KCNJ4P48050 445 aa27.28■■□□□ 1.96
OTUB1-212ENST00000543988 SCNN1DP51172 638 aa27.28■■□□□ 1.96
OTUB1-212ENST00000543988 RBM46Q8TBY0 533 aaKnown RBP27.28■■□□□ 1.96
OTUB1-212ENST00000543988 TAF1DQ9H5J8 278 aaPredicted RBP27.28■■□□□ 1.96
OTUB1-212ENST00000543988 KCNQ5Q9NR82 932 aa27.28■■□□□ 1.96
OTUB1-212ENST00000543988 HDAC5Q9UQL6 1122 aa27.28■■□□□ 1.96
OTUB1-212ENST00000543988 RFX5P48382 616 aaPredicted RBP27.27■■□□□ 1.96
OTUB1-212ENST00000543988 GMPSP49915 693 aaPredicted RBP27.27■■□□□ 1.96
OTUB1-212ENST00000543988 TNIP1Q15025 636 aa27.27■■□□□ 1.96
OTUB1-212ENST00000543988 TXNRD3Q86VQ6 643 aa27.27■■□□□ 1.96
OTUB1-212ENST00000543988 G3V3G9 751 aa27.26■■□□□ 1.95
OTUB1-212ENST00000543988 DCAF8Q5TAQ9 597 aa27.26■■□□□ 1.95
OTUB1-212ENST00000543988 RIPOR2Q9Y4F9 1068 aa27.26■■□□□ 1.95
OTUB1-212ENST00000543988 PSMD14O00487 310 aa27.25■■□□□ 1.95
OTUB1-212ENST00000543988 PLIN1O60240 522 aa27.25■■□□□ 1.95
OTUB1-212ENST00000543988 LRRC24Q50LG9 513 aa27.25■■□□□ 1.95
OTUB1-212ENST00000543988 ITPRIPQ8IWB1 547 aa27.25■■□□□ 1.95
OTUB1-212ENST00000543988 PANK1Q8TE04 598 aa27.25■■□□□ 1.95
OTUB1-212ENST00000543988 A0A1B0GUL6 1792 aa27.25■■□□□ 1.95
OTUB1-212ENST00000543988 IRS2Q9Y4H2 1338 aa27.24■■□□□ 1.95
OTUB1-212ENST00000543988 POTEIP0CG38 1075 aa27.24■■□□□ 1.95
OTUB1-212ENST00000543988 POTEJP0CG39 1038 aa27.24■■□□□ 1.95
OTUB1-212ENST00000543988 LMOD1P29536 600 aaPredicted RBP27.24■■□□□ 1.95
OTUB1-212ENST00000543988 EPHX2P34913 555 aa27.24■■□□□ 1.95
OTUB1-212ENST00000543988 PTPN12Q05209 780 aaKnown RBP27.23■■□□□ 1.95
OTUB1-212ENST00000543988 SCN4AP35499 1836 aa27.23■■□□□ 1.95
OTUB1-212ENST00000543988 MROH5Q6ZUA9 1318 aa27.22■■□□□ 1.95
OTUB1-212ENST00000543988 GNAI2P04899 355 aa27.22■■□□□ 1.95
OTUB1-212ENST00000543988 EPS15P42566 896 aa27.22■■□□□ 1.95
OTUB1-212ENST00000543988 GPRC5DQ9NZD1 345 aa27.22■■□□□ 1.95
OTUB1-212ENST00000543988 ZBTB12Q9Y330 459 aaPredicted RBP27.22■■□□□ 1.95
OTUB1-212ENST00000543988 METTL24Q5JXM2 366 aa27.21■■□□□ 1.95
OTUB1-212ENST00000543988 C15orf52Q6ZUT6 534 aaKnown RBP27.21■■□□□ 1.95
OTUB1-212ENST00000543988 SMC1BQ8NDV3 1235 aa27.21■■□□□ 1.95
OTUB1-212ENST00000543988 COA1Q9GZY4 146 aa27.21■■□□□ 1.95
OTUB1-212ENST00000543988 SCN9AQ15858 1988 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms