RNA–Protein interactions for RNA: ENST00000543814.5

PAAF1-213, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-213ENST00000543814 PROSER3Q2NL68 480 aa22.35■■□□□ 1.17
PAAF1-213ENST00000543814 MOB2Q70IA6 237 aa22.35■■□□□ 1.17
PAAF1-213ENST00000543814 CELF1Q92879 486 aaKnown RBP22.35■■□□□ 1.17
PAAF1-213ENST00000543814 CFHR5Q9BXR6 569 aa22.35■■□□□ 1.17
PAAF1-213ENST00000543814 UBE2Q2LH0YL09 131 aa22.34■■□□□ 1.17
PAAF1-213ENST00000543814 FKTNO75072 461 aa22.34■■□□□ 1.17
PAAF1-213ENST00000543814 TCIRG1Q13488 830 aa22.34■■□□□ 1.17
PAAF1-213ENST00000543814 PITPNM2Q9BZ72 1349 aa22.33■■□□□ 1.17
PAAF1-213ENST00000543814 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.17
PAAF1-213ENST00000543814 ZNF609O15014 1411 aa22.33■■□□□ 1.17
PAAF1-213ENST00000543814 ANXA1P04083 346 aa22.33■■□□□ 1.17
PAAF1-213ENST00000543814 TBC1D16Q8TBP0 767 aa22.33■■□□□ 1.17
PAAF1-213ENST00000543814 SCN9AQ15858 1988 aa22.32■■□□□ 1.16
PAAF1-213ENST00000543814 SF3B3Q15393 1217 aaKnown RBP22.32■■□□□ 1.16
PAAF1-213ENST00000543814 AGBL3Q8NEM8 1001 aa22.32■■□□□ 1.16
PAAF1-213ENST00000543814 COL4A1P02462 1669 aa22.31■■□□□ 1.16
PAAF1-213ENST00000543814 POTEFA5A3E0 1075 aa22.31■■□□□ 1.16
PAAF1-213ENST00000543814 EIF2S2P20042 333 aaKnown RBP22.31■■□□□ 1.16
PAAF1-213ENST00000543814 COPS6Q7L5N1 327 aa22.31■■□□□ 1.16
PAAF1-213ENST00000543814 R3HDMLQ9H3Y0 253 aa22.31■■□□□ 1.16
PAAF1-213ENST00000543814 PPP2R1AP30153 589 aa22.3■■□□□ 1.16
PAAF1-213ENST00000543814 INTS3Q68E01 1043 aaKnown RBP22.3■■□□□ 1.16
PAAF1-213ENST00000543814 NECTIN2Q92692 538 aa22.3■■□□□ 1.16
PAAF1-213ENST00000543814 ZC3H12CQ9C0D7 883 aaKnown RBP22.3■■□□□ 1.16
PAAF1-213ENST00000543814 SREBF2Q12772 1141 aa22.29■■□□□ 1.16
PAAF1-213ENST00000543814 RSBN1LQ6PCB5 846 aaPredicted RBP22.29■■□□□ 1.16
PAAF1-213ENST00000543814 XAGE3Q8WTP9 111 aa22.29■■□□□ 1.16
PAAF1-213ENST00000543814 GMLQ99445 158 aa22.29■■□□□ 1.16
PAAF1-213ENST00000543814 PCGF6Q9BYE7 350 aa22.29■■□□□ 1.16
PAAF1-213ENST00000543814 MYOZ2Q9NPC6 264 aa22.29■■□□□ 1.16
PAAF1-213ENST00000543814 NEFMP07197 916 aa22.28■■□□□ 1.16
PAAF1-213ENST00000543814 AIMP1Q12904 312 aaKnown RBP22.28■■□□□ 1.16
PAAF1-213ENST00000543814 SCAF8Q9UPN6 1271 aaKnown RBP22.28■■□□□ 1.16
PAAF1-213ENST00000543814 NFE2L2Q16236 605 aa22.27■■□□□ 1.16
PAAF1-213ENST00000543814 PRAMEF18Q5VWM3 479 aa22.27■■□□□ 1.16
PAAF1-213ENST00000543814 PODXL2Q9NZ53 605 aa22.27■■□□□ 1.16
PAAF1-213ENST00000543814 G3V3G9 751 aa22.26■■□□□ 1.15
PAAF1-213ENST00000543814 USP17L8P0C7I0 530 aa22.26■■□□□ 1.15
PAAF1-213ENST00000543814 MKRN3Q13064 507 aaKnown RBP22.26■■□□□ 1.15
PAAF1-213ENST00000543814 DCAF8Q5TAQ9 597 aa22.26■■□□□ 1.15
PAAF1-213ENST00000543814 ZNF428Q96B54 188 aa22.26■■□□□ 1.15
PAAF1-213ENST00000543814 PLEKHF1Q96S99 279 aa22.26■■□□□ 1.15
PAAF1-213ENST00000543814 TSPYL4Q9UJ04 414 aa22.26■■□□□ 1.15
PAAF1-213ENST00000543814 RPS8P62241 208 aaKnown RBP22.25■■□□□ 1.15
PAAF1-213ENST00000543814 FAM89AQ96GI7 184 aa22.25■■□□□ 1.15
PAAF1-213ENST00000543814 RBBP6Q7Z6E9 1792 aaKnown RBP22.25■■□□□ 1.15
PAAF1-213ENST00000543814 TTLL12Q14166 644 aaPredicted RBP22.24■■□□□ 1.15
PAAF1-213ENST00000543814 OTOP1Q7RTM1 612 aa22.24■■□□□ 1.15
PAAF1-213ENST00000543814 TRIM17Q9Y577 477 aa22.24■■□□□ 1.15
PAAF1-213ENST00000543814 MKI67P46013 3256 aaKnown RBP22.23■■□□□ 1.15
PAAF1-213ENST00000543814 PSME4Q14997 1843 aa22.23■■□□□ 1.15
PAAF1-213ENST00000543814 UFL1O94874 794 aa22.22■■□□□ 1.15
PAAF1-213ENST00000543814 ALDH1A1P00352 501 aa22.22■■□□□ 1.15
PAAF1-213ENST00000543814 PTPN12Q05209 780 aaKnown RBP22.22■■□□□ 1.15
PAAF1-213ENST00000543814 NBPF9Q3BBW0 867 aa22.22■■□□□ 1.15
PAAF1-213ENST00000543814 COLQQ9Y215 455 aaPredicted RBP22.22■■□□□ 1.15
PAAF1-213ENST00000543814 NF2P35240 595 aa22.21■■□□□ 1.15
PAAF1-213ENST00000543814 ISCA1Q9BUE6 129 aa22.21■■□□□ 1.15
PAAF1-213ENST00000543814 GGA1Q9UJY5 639 aa22.21■■□□□ 1.15
PAAF1-213ENST00000543814 EN2P19622 333 aaPredicted RBP22.2■■□□□ 1.14
PAAF1-213ENST00000543814 SPRYD7Q5W111 196 aa22.2■■□□□ 1.14
PAAF1-213ENST00000543814 ANKIB1Q9P2G1 1089 aa22.2■■□□□ 1.14
PAAF1-213ENST00000543814 HTTP42858 3142 aa22.2■■□□□ 1.14
PAAF1-213ENST00000543814 USP17L3A6NCW0 530 aa22.19■■□□□ 1.14
PAAF1-213ENST00000543814 USP17L4A6NCW7 530 aa22.19■■□□□ 1.14
PAAF1-213ENST00000543814 USP17L1Q7RTZ2 530 aa22.19■■□□□ 1.14
PAAF1-213ENST00000543814 BABAM1Q9NWV8 329 aa22.19■■□□□ 1.14
PAAF1-213ENST00000543814 PTPN22Q9Y2R2 807 aa22.19■■□□□ 1.14
PAAF1-213ENST00000543814 INHBEP58166 350 aa22.18■■□□□ 1.14
PAAF1-213ENST00000543814 LDLRAD1Q5T700 205 aa22.18■■□□□ 1.14
PAAF1-213ENST00000543814 ARMC9Q7Z3E5 817 aa22.18■■□□□ 1.14
PAAF1-213ENST00000543814 PLBD2Q8NHP8 589 aa22.18■■□□□ 1.14
PAAF1-213ENST00000543814 ARMC5Q96C12 935 aa22.18■■□□□ 1.14
PAAF1-213ENST00000543814 IRS4O14654 1257 aaPredicted RBP22.17■■□□□ 1.14
PAAF1-213ENST00000543814 RTL5Q5HYW3 569 aaPredicted RBP22.17■■□□□ 1.14
PAAF1-213ENST00000543814 PODNQ7Z5L7 613 aa22.17■■□□□ 1.14
PAAF1-213ENST00000543814 SEC31BQ9NQW1 1179 aa22.17■■□□□ 1.14
PAAF1-213ENST00000543814 MANSC4A6NHS7 340 aaPredicted RBP22.16■■□□□ 1.14
PAAF1-213ENST00000543814 ATP5J2-PTCD1G3V325 749 aa22.16■■□□□ 1.14
PAAF1-213ENST00000543814 WNT10BO00744 389 aa22.16■■□□□ 1.14
PAAF1-213ENST00000543814 IFNL1Q8IU54 200 aa22.16■■□□□ 1.14
PAAF1-213ENST00000543814 PRKG1Q13976 671 aa22.15■■□□□ 1.14
PAAF1-213ENST00000543814 ANKRD13DQ6ZTN6 518 aa22.15■■□□□ 1.14
PAAF1-213ENST00000543814 ERO1AQ96HE7 468 aa22.15■■□□□ 1.14
PAAF1-213ENST00000543814 TRIM28Q13263 835 aaKnown RBP22.14■■□□□ 1.13
PAAF1-213ENST00000543814 CHPF2Q9P2E5 772 aa22.13■■□□□ 1.13
PAAF1-213ENST00000543814 XDHP47989 1333 aa22.12■■□□□ 1.13
PAAF1-213ENST00000543814 MAPK8IP3Q9UPT6 1336 aa22.12■■□□□ 1.13
PAAF1-213ENST00000543814 IGF2BP3O00425 579 aaKnown RBP eCLIP22.12■■□□□ 1.13
PAAF1-213ENST00000543814 OGFOD1Q8N543 542 aa22.12■■□□□ 1.13
PAAF1-213ENST00000543814 CD99L2Q8TCZ2 262 aa22.12■■□□□ 1.13
PAAF1-213ENST00000543814 ANGEL1Q9UNK9 670 aaKnown RBP22.12■■□□□ 1.13
PAAF1-213ENST00000543814 DACT2Q5SW24 774 aa22.11■■□□□ 1.13
PAAF1-213ENST00000543814 MXD3Q9BW11 206 aa22.11■■□□□ 1.13
PAAF1-213ENST00000543814 PNNQ9H307 717 aaKnown RBP22.11■■□□□ 1.13
PAAF1-213ENST00000543814 ZBTB48P10074 688 aaPredicted RBP22.1■■□□□ 1.13
PAAF1-213ENST00000543814 ATP2B4P23634 1241 aa22.1■■□□□ 1.13
PAAF1-213ENST00000543814 KRT24Q2M2I5 525 aa22.1■■□□□ 1.13
PAAF1-213ENST00000543814 SLC10A4Q96EP9 437 aa22.1■■□□□ 1.13
PAAF1-213ENST00000543814 OTUD5Q96G74 571 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms