RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 EPHX2P34913 555 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 NIM1KQ8IY84 436 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 PI4KAP1Q8N8J0 262 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 MYD88Q99836 296 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 CDHR2Q9BYE9 1310 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 CACNA1FO60840 1977 aa14.31□□□□□ -0.12
COPS7A-217ENST00000543537 PDE8AO60658 829 aa14.3□□□□□ -0.12
COPS7A-217ENST00000543537 HMMRO75330 724 aa14.3□□□□□ -0.12
COPS7A-217ENST00000543537 IGKV5-2P06315 115 aa14.3□□□□□ -0.12
COPS7A-217ENST00000543537 SCNN1DP51172 638 aa14.3□□□□□ -0.12
COPS7A-217ENST00000543537 AOC3Q16853 763 aa14.3□□□□□ -0.12
COPS7A-217ENST00000543537 CELF1Q92879 486 aaKnown RBP14.3□□□□□ -0.12
COPS7A-217ENST00000543537 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
COPS7A-217ENST00000543537 PASKQ96RG2 1323 aa14.3□□□□□ -0.12
COPS7A-217ENST00000543537 LTBP1Q14766 1721 aa14.29□□□□□ -0.12
COPS7A-217ENST00000543537 ITGBL1O95965 494 aaPredicted RBP14.29□□□□□ -0.12
COPS7A-217ENST00000543537 RPS8P62241 208 aaKnown RBP14.29□□□□□ -0.12
COPS7A-217ENST00000543537 FLIIQ13045 1269 aa14.29□□□□□ -0.12
COPS7A-217ENST00000543537 CCDC152Q4G0S7 254 aa14.29□□□□□ -0.12
COPS7A-217ENST00000543537 PODXL2Q9NZ53 605 aa14.29□□□□□ -0.12
COPS7A-217ENST00000543537 TAF1P21675 1872 aa14.29□□□□□ -0.12
COPS7A-217ENST00000543537 COL4A1P02462 1669 aa14.28□□□□□ -0.12
COPS7A-217ENST00000543537 HTRA3P83110 453 aa14.28□□□□□ -0.12
COPS7A-217ENST00000543537 CXCL9Q07325 125 aa14.28□□□□□ -0.12
COPS7A-217ENST00000543537 G2E3Q7L622 706 aa14.28□□□□□ -0.12
COPS7A-217ENST00000543537 RTL9Q8NET4 1388 aa14.28□□□□□ -0.12
COPS7A-217ENST00000543537 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
COPS7A-217ENST00000543537 PCNTO95613 3336 aa14.27□□□□□ -0.12
COPS7A-217ENST00000543537 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.13
COPS7A-217ENST00000543537 NEXNQ0ZGT2 675 aa14.27□□□□□ -0.13
COPS7A-217ENST00000543537 FKBP5Q13451 457 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-217ENST00000543537 RTL5Q5HYW3 569 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-217ENST00000543537 ZBTB47Q9UFB7 747 aaPredicted RBP14.27□□□□□ -0.13
COPS7A-217ENST00000543537 H7C1W4 665 aa14.26□□□□□ -0.13
COPS7A-217ENST00000543537 LMOD1P29536 600 aaPredicted RBP14.26□□□□□ -0.13
COPS7A-217ENST00000543537 USP50Q70EL3 339 aaPredicted RBP14.26□□□□□ -0.13
COPS7A-217ENST00000543537 PLA2G12BQ9BX93 195 aa14.26□□□□□ -0.13
COPS7A-217ENST00000543537 GPRC5DQ9NZD1 345 aa14.26□□□□□ -0.13
COPS7A-217ENST00000543537 YDJCA8MPS7 323 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 EPS15P42566 896 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 CTSWP56202 376 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 GPSM2P81274 684 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 WASHC4Q2M389 1173 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 EAPPQ56P03 285 aaPredicted RBP14.25□□□□□ -0.13
COPS7A-217ENST00000543537 CIAPIN1Q6FI81 312 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 SMC5Q8IY18 1101 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 LINS1Q8NG48 757 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 DNAAF4Q8WXU2 420 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 SEC31BQ9NQW1 1179 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 POLLQ9UGP5 575 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 NSFL1CQ9UNZ2 370 aaKnown RBP14.25□□□□□ -0.13
COPS7A-217ENST00000543537 PCDHB15Q9Y5E8 787 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 GJA3Q9Y6H8 435 aa14.25□□□□□ -0.13
COPS7A-217ENST00000543537 CASP7P55210 303 aa14.24□□□□□ -0.13
COPS7A-217ENST00000543537 GCKRQ14397 625 aa14.24□□□□□ -0.13
COPS7A-217ENST00000543537 TNIP1Q15025 636 aa14.24□□□□□ -0.13
COPS7A-217ENST00000543537 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
COPS7A-217ENST00000543537 TTLL11Q8NHH1 800 aa14.24□□□□□ -0.13
COPS7A-217ENST00000543537 EYA3Q99504 573 aa14.24□□□□□ -0.13
COPS7A-217ENST00000543537 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
COPS7A-217ENST00000543537 ADARB2Q9NS39 739 aaKnown RBP14.24□□□□□ -0.13
COPS7A-217ENST00000543537 ALDH1L1O75891 902 aa14.23□□□□□ -0.13
COPS7A-217ENST00000543537 GNAI2P04899 355 aa14.23□□□□□ -0.13
COPS7A-217ENST00000543537 CNTROBQ8N137 903 aa14.23□□□□□ -0.13
COPS7A-217ENST00000543537 TBC1D16Q8TBP0 767 aa14.23□□□□□ -0.13
COPS7A-217ENST00000543537 DPF2Q92785 391 aa14.23□□□□□ -0.13
COPS7A-217ENST00000543537 CDC5LQ99459 802 aaKnown RBP14.23□□□□□ -0.13
COPS7A-217ENST00000543537 PGAP2Q9UHJ9 254 aa14.23□□□□□ -0.13
COPS7A-217ENST00000543537 ZNF609O15014 1411 aa14.23□□□□□ -0.13
COPS7A-217ENST00000543537 IGHDP01880 384 aa14.22□□□□□ -0.13
COPS7A-217ENST00000543537 GMPSP49915 693 aaPredicted RBP14.22□□□□□ -0.13
COPS7A-217ENST00000543537 ANKRD18AQ8IVF6 992 aa14.22□□□□□ -0.13
COPS7A-217ENST00000543537 ZC3H15Q8WU90 426 aaKnown RBP14.22□□□□□ -0.13
COPS7A-217ENST00000543537 SRCIN1Q9C0H9 1055 aa14.22□□□□□ -0.13
COPS7A-217ENST00000543537 BSDC1Q9NW68 430 aaPredicted RBP14.22□□□□□ -0.13
COPS7A-217ENST00000543537 MYH3P11055 1940 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 XDHP47989 1333 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 TMEM88BA6NKF7 163 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 C6orf229H3BNL8 230 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 CSF1RP07333 972 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 RPS12P25398 132 aaKnown RBP14.21□□□□□ -0.13
COPS7A-217ENST00000543537 IFFO2Q5TF58 517 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 MAP1SQ66K74 1059 aaPredicted RBP14.21□□□□□ -0.13
COPS7A-217ENST00000543537 UBE3BQ7Z3V4 1068 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 ANKRD44Q8N8A2 993 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 JARID2Q92833 1246 aaPredicted RBP14.21□□□□□ -0.13
COPS7A-217ENST00000543537 GGA1Q9UJY5 639 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
COPS7A-217ENST00000543537 CNTNAP1P78357 1384 aa14.21□□□□□ -0.14
COPS7A-217ENST00000543537 RAD17O75943 681 aa14.2□□□□□ -0.14
COPS7A-217ENST00000543537 BEND3Q5T5X7 828 aa14.2□□□□□ -0.14
COPS7A-217ENST00000543537 ZC3H12CQ9C0D7 883 aaKnown RBP14.2□□□□□ -0.14
COPS7A-217ENST00000543537 GREM2Q9H772 168 aa14.2□□□□□ -0.14
COPS7A-217ENST00000543537 ECE2O60344 883 aa14.19□□□□□ -0.14
COPS7A-217ENST00000543537 VIL1P09327 827 aaKnown RBP14.19□□□□□ -0.14
COPS7A-217ENST00000543537 ATP2B4P23634 1241 aa14.19□□□□□ -0.14
COPS7A-217ENST00000543537 FAM161AQ3B820 660 aa14.19□□□□□ -0.14
COPS7A-217ENST00000543537 HSP90AB4PQ58FF6 505 aa14.19□□□□□ -0.14
COPS7A-217ENST00000543537 SLC4A10Q6U841 1118 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms