RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 COL9A3Q14050 684 aaPredicted RBP15.97■□□□□ 0.15
PPME1-208ENST00000543525 FERMT3Q86UX7 667 aa15.97■□□□□ 0.15
PPME1-208ENST00000543525 GTF3C6Q969F1 213 aa15.97■□□□□ 0.15
PPME1-208ENST00000543525 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
PPME1-208ENST00000543525 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
PPME1-208ENST00000543525 GOLGA6L4A6NEF3 574 aa15.96■□□□□ 0.15
PPME1-208ENST00000543525 HMGB1P09429 215 aaKnown RBP15.96■□□□□ 0.15
PPME1-208ENST00000543525 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
PPME1-208ENST00000543525 IL15P40933 162 aaPredicted RBP15.96■□□□□ 0.15
PPME1-208ENST00000543525 CCDC129Q6ZRS4 1044 aa15.96■□□□□ 0.15
PPME1-208ENST00000543525 Q6ZUG5 572 aa15.96■□□□□ 0.15
PPME1-208ENST00000543525 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
PPME1-208ENST00000543525 QTRT2Q9H974 415 aaKnown RBP15.96■□□□□ 0.15
PPME1-208ENST00000543525 HELLSQ9NRZ9 838 aa15.96■□□□□ 0.15
PPME1-208ENST00000543525 PALLDQ8WX93 1383 aa15.96■□□□□ 0.15
PPME1-208ENST00000543525 GLI3P10071 1580 aa15.96■□□□□ 0.15
PPME1-208ENST00000543525 NBPF26B4DH59 902 aa15.96■□□□□ 0.14
PPME1-208ENST00000543525 ERVV-2B6SEH9 535 aa15.96■□□□□ 0.14
PPME1-208ENST00000543525 HSP90AA2PQ14568 343 aaPredicted RBP15.96■□□□□ 0.14
PPME1-208ENST00000543525 NBPF14Q5TI25 921 aa15.96■□□□□ 0.14
PPME1-208ENST00000543525 NBPF10Q6P3W6 841 aaKnown RBP15.96■□□□□ 0.14
PPME1-208ENST00000543525 DDX46Q7L014 1031 aaKnown RBP15.96■□□□□ 0.14
PPME1-208ENST00000543525 NBPF15Q8N660 670 aa15.96■□□□□ 0.14
PPME1-208ENST00000543525 ZCRB1Q8TBF4 217 aaKnown RBP15.96■□□□□ 0.14
PPME1-208ENST00000543525 SPATA32Q96LK8 384 aa15.96■□□□□ 0.14
PPME1-208ENST00000543525 NUP62CLQ9H1M0 184 aa15.96■□□□□ 0.14
PPME1-208ENST00000543525 MAP3K11Q16584 847 aa15.95■□□□□ 0.14
PPME1-208ENST00000543525 NEUROD6Q96NK8 337 aa15.95■□□□□ 0.14
PPME1-208ENST00000543525 SEC62Q99442 399 aaKnown RBP15.95■□□□□ 0.14
PPME1-208ENST00000543525 PAG1Q9NWQ8 432 aa15.95■□□□□ 0.14
PPME1-208ENST00000543525 NDUFB9Q9Y6M9 179 aa15.95■□□□□ 0.14
PPME1-208ENST00000543525 CYP21A2P08686 494 aa15.94■□□□□ 0.14
PPME1-208ENST00000543525 ATG9AQ7Z3C6 839 aa15.94■□□□□ 0.14
PPME1-208ENST00000543525 CCDC191Q8NCU4 936 aa15.94■□□□□ 0.14
PPME1-208ENST00000543525 LLPHQ9BRT6 129 aaKnown RBP15.94■□□□□ 0.14
PPME1-208ENST00000543525 DSCC1Q9BVC3 393 aa15.94■□□□□ 0.14
PPME1-208ENST00000543525 FGD1P98174 961 aa15.94■□□□□ 0.14
PPME1-208ENST00000543525 TTLL7Q6ZT98 887 aa15.94■□□□□ 0.14
PPME1-208ENST00000543525 DDX19AQ9NUU7 478 aaKnown RBP15.94■□□□□ 0.14
PPME1-208ENST00000543525 H3BQV1 296 aa15.93■□□□□ 0.14
PPME1-208ENST00000543525 GOLIM4O00461 696 aa15.93■□□□□ 0.14
PPME1-208ENST00000543525 TPM3P06753 285 aa15.93■□□□□ 0.14
PPME1-208ENST00000543525 IFFO2Q5TF58 517 aa15.93■□□□□ 0.14
PPME1-208ENST00000543525 FAM173BQ6P4H8 233 aa15.93■□□□□ 0.14
PPME1-208ENST00000543525 LEO1Q8WVC0 666 aaPredicted RBP15.93■□□□□ 0.14
PPME1-208ENST00000543525 ZSCAN16Q9H4T2 348 aaPredicted RBP15.93■□□□□ 0.14
PPME1-208ENST00000543525 ATG3Q9NT62 314 aa15.93■□□□□ 0.14
PPME1-208ENST00000543525 WDR17Q8IZU2 1322 aa15.93■□□□□ 0.14
PPME1-208ENST00000543525 EYA2O00167 538 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 CIAO1O76071 339 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 LIG1P18858 919 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 ZMYM1Q5SVZ6 1142 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 DHX32Q7L7V1 743 aaKnown RBP15.92■□□□□ 0.14
PPME1-208ENST00000543525 BRF1Q92994 677 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 JAK2O60674 1132 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 PFKFB2O60825 505 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 RESTQ13127 1097 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 SASS6Q6UVJ0 657 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 TOM1L2Q6ZVM7 507 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 CHMP4CQ96CF2 233 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 TNMDQ9H2S6 317 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 TFIP11Q9UBB9 837 aaKnown RBP15.92■□□□□ 0.14
PPME1-208ENST00000543525 CCDC9Q9Y3X0 531 aaKnown RBP15.92■□□□□ 0.14
PPME1-208ENST00000543525 KIF3AQ9Y496 699 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 NUP188Q5SRE5 1749 aa15.92■□□□□ 0.14
PPME1-208ENST00000543525 NKX1-1Q15270 411 aaPredicted RBP15.91■□□□□ 0.14
PPME1-208ENST00000543525 FAM200AQ8TCP9 573 aa15.91■□□□□ 0.14
PPME1-208ENST00000543525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.91■□□□□ 0.14
PPME1-208ENST00000543525 C8orf37Q96NL8 207 aa15.91■□□□□ 0.14
PPME1-208ENST00000543525 UBR2Q8IWV8 1755 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 RNF113AO15541 343 aaKnown RBP15.9■□□□□ 0.14
PPME1-208ENST00000543525 A1BGP04217 495 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 CHGBP05060 677 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 IFIT1P09914 478 aaKnown RBP15.9■□□□□ 0.14
PPME1-208ENST00000543525 TIMM10P62072 90 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 PLCB2Q00722 1185 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 TYRO3Q06418 890 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 LRRFIP1Q32MZ4 808 aaKnown RBP15.9■□□□□ 0.14
PPME1-208ENST00000543525 SMARCC2Q8TAQ2 1214 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 PIBF1Q8WXW3 757 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 CLSTN2Q9H4D0 955 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 PRDM11Q9NQV5 511 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 CFAP45Q9UL16 551 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 TJP1Q07157 1748 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 KCPQ6ZWJ8 1503 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 GOLGA6L6A8MZA4 724 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 HMGN5P82970 282 aaKnown RBP15.9■□□□□ 0.14
PPME1-208ENST00000543525 STOX1Q6ZVD7 989 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 NGLY1Q96IV0 654 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 ZBTB3Q9H5J0 574 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 DACT1Q9NYF0 836 aa15.9■□□□□ 0.14
PPME1-208ENST00000543525 UQCRHLA0A096LP55 91 aa15.89■□□□□ 0.13
PPME1-208ENST00000543525 UQCRHP07919 91 aa15.89■□□□□ 0.13
PPME1-208ENST00000543525 SCRN1Q12765 414 aa15.89■□□□□ 0.13
PPME1-208ENST00000543525 CAMK4Q16566 473 aa15.89■□□□□ 0.13
PPME1-208ENST00000543525 NAA16Q6N069 864 aaPredicted RBP15.89■□□□□ 0.13
PPME1-208ENST00000543525 BICD2Q8TD16 824 aa15.89■□□□□ 0.13
PPME1-208ENST00000543525 MRVI1Q9Y6F6 885 aa15.89■□□□□ 0.13
PPME1-208ENST00000543525 SRCAPQ6ZRS2 3230 aa15.89■□□□□ 0.13
PPME1-208ENST00000543525 PAPPAQ13219 1627 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms