RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 RCOR1Q9UKL0 485 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 JCADQ9P266 1359 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 STK3Q13188 491 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 GORABQ5T7V8 394 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 ERC1Q8IUD2 1116 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 GOLGA5Q8TBA6 731 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 NECTIN2Q92692 538 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 GOLPH3LQ9H4A5 285 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 YY1AP1Q9H869 796 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 PSD3Q9NYI0 1048 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 RSPH14Q9UHP6 348 aa11.33□□□□□ -0.6
TCF4-208ENST00000543082 SMC2O95347 1197 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 IFIT2P09913 472 aaKnown RBP11.32□□□□□ -0.6
TCF4-208ENST00000543082 ST5P78524 1137 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 NMIQ13287 307 aaPredicted RBP11.32□□□□□ -0.6
TCF4-208ENST00000543082 KRT32Q14532 448 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 HSP90AB2PQ58FF8 381 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 ABCC6O95255 1503 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 MYO1CO00159 1063 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 TBC1D8O95759 1140 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 CASQ1P31415 396 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 SMC1AQ14683 1233 aaKnown RBP11.32□□□□□ -0.6
TCF4-208ENST00000543082 TSGA10IPQ3SY00 556 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 NAA16Q6N069 864 aaPredicted RBP11.32□□□□□ -0.6
TCF4-208ENST00000543082 CC2D1AQ6P1N0 951 aaPredicted RBP11.32□□□□□ -0.6
TCF4-208ENST00000543082 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 ENGASEQ8NFI3 743 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 EXOC4Q96A65 974 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 ZNF396Q96N95 335 aaPredicted RBP11.32□□□□□ -0.6
TCF4-208ENST00000543082 XPO4Q9C0E2 1151 aaKnown RBP11.32□□□□□ -0.6
TCF4-208ENST00000543082 MED23Q9ULK4 1368 aa11.32□□□□□ -0.6
TCF4-208ENST00000543082 JAK2O60674 1132 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
TCF4-208ENST00000543082 PSME1Q06323 249 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 ZRSR1Q15695 479 aaKnown RBP11.31□□□□□ -0.6
TCF4-208ENST00000543082 IQUBQ8NA54 791 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 FBXO18Q8NFZ0 1043 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 TCEANC2Q96MN5 208 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 ADD1P35611 737 aaKnown RBP11.31□□□□□ -0.6
TCF4-208ENST00000543082 EVCP57679 992 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 MTX1Q13505 466 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
TCF4-208ENST00000543082 FCHSD1Q86WN1 690 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 GPR161Q8N6U8 529 aaKnown RBP11.31□□□□□ -0.6
TCF4-208ENST00000543082 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 FSIP1Q8NA03 581 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 FAM227BQ96M60 508 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 IFNKQ9P0W0 207 aa11.31□□□□□ -0.6
TCF4-208ENST00000543082 URI1O94763 535 aaPredicted RBP11.3□□□□□ -0.6
TCF4-208ENST00000543082 LLPHQ9BRT6 129 aaKnown RBP11.3□□□□□ -0.6
TCF4-208ENST00000543082 CARD6Q9BX69 1037 aa11.3□□□□□ -0.6
TCF4-208ENST00000543082 SASH3O75995 380 aa11.3□□□□□ -0.6
TCF4-208ENST00000543082 NBPF7P0C2Y1 421 aaPredicted RBP11.3□□□□□ -0.6
TCF4-208ENST00000543082 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
TCF4-208ENST00000543082 CEBPZQ03701 1054 aaKnown RBP11.3□□□□□ -0.6
TCF4-208ENST00000543082 HDGFL1Q5TGJ6 251 aa11.3□□□□□ -0.6
TCF4-208ENST00000543082 SRLQ86TD4 932 aa11.3□□□□□ -0.6
TCF4-208ENST00000543082 C10orf67Q8IYJ2 551 aa11.3□□□□□ -0.6
TCF4-208ENST00000543082 ARFGAP3Q9NP61 516 aa11.3□□□□□ -0.6
TCF4-208ENST00000543082 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 PRR36Q9H6K5 1346 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 ZSCAN12O43309 604 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 COL9A3Q14050 684 aaPredicted RBP11.29□□□□□ -0.6
TCF4-208ENST00000543082 NOM1Q5C9Z4 860 aaKnown RBP11.29□□□□□ -0.6
TCF4-208ENST00000543082 JAKMIP3Q5VZ66 844 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 TRIM65Q6PJ69 517 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 SMARCC2Q8TAQ2 1214 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 MRPS27Q92552 414 aaKnown RBP11.29□□□□□ -0.6
TCF4-208ENST00000543082 SYTL4Q96C24 671 aaPredicted RBP11.29□□□□□ -0.6
TCF4-208ENST00000543082 DDX11Q96FC9 970 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 MPHOSPH8Q99549 860 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 ATG3Q9NT62 314 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 PARP3Q9Y6F1 533 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 FLT4P35916 1363 aa11.29□□□□□ -0.6
TCF4-208ENST00000543082 NUTM2FA1L443 756 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 GNAT3A8MTJ3 354 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
TCF4-208ENST00000543082 IVLP07476 585 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
TCF4-208ENST00000543082 NUTM2GQ5VZR2 741 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 PHAXQ9H814 394 aaKnown RBP11.28□□□□□ -0.6
TCF4-208ENST00000543082 RRP15Q9Y3B9 282 aaKnown RBP11.28□□□□□ -0.6
TCF4-208ENST00000543082 IGSF1Q8N6C5 1336 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 MED1Q15648 1581 aaPredicted RBP11.28□□□□□ -0.6
TCF4-208ENST00000543082 SBNO1A3KN83 1393 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 METP08581 1390 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 A0A087WWV3 80 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
TCF4-208ENST00000543082 A0A0D9SFI3 127 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 ME1P48163 572 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 BEND3Q5T5X7 828 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 AACSQ86V21 672 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 REXO1L1PQ8IX06 675 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 FMR1NBQ8N0W7 255 aaPredicted RBP11.28□□□□□ -0.6
TCF4-208ENST00000543082 DNAAF4Q8WXU2 420 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 FSD1Q9BTV5 496 aa11.28□□□□□ -0.6
TCF4-208ENST00000543082 USP6P35125 1406 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms