RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ATP6V0A2Q9Y487 856 aa28.61■■■□□ 2.17
HOMER3-205ENST00000542541 RIPOR2Q9Y4F9 1068 aa28.61■■■□□ 2.17
HOMER3-205ENST00000542541 RAB11FIP3O75154 756 aa28.6■■■□□ 2.17
HOMER3-205ENST00000542541 LRRC24Q50LG9 513 aa28.6■■■□□ 2.17
HOMER3-205ENST00000542541 EXOC6BQ9Y2D4 811 aa28.6■■■□□ 2.17
HOMER3-205ENST00000542541 MROH5Q6ZUA9 1318 aa28.59■■■□□ 2.17
HOMER3-205ENST00000542541 CC2D2BQ6DHV5 1058 aa28.58■■■□□ 2.17
HOMER3-205ENST00000542541 ATG9AQ7Z3C6 839 aa28.58■■■□□ 2.17
HOMER3-205ENST00000542541 MINPP1Q9UNW1 487 aa28.58■■■□□ 2.17
HOMER3-205ENST00000542541 ANKRD2Q9GZV1 360 aa28.58■■■□□ 2.17
HOMER3-205ENST00000542541 METTL24Q5JXM2 366 aa28.57■■■□□ 2.16
HOMER3-205ENST00000542541 CEP126Q9P2H0 1117 aa28.57■■■□□ 2.16
HOMER3-205ENST00000542541 GRIPAP1Q4V328 841 aa28.56■■■□□ 2.16
HOMER3-205ENST00000542541 GTF3C3Q9Y5Q9 886 aa28.56■■■□□ 2.16
HOMER3-205ENST00000542541 CHRNDQ07001 517 aa28.55■■■□□ 2.16
HOMER3-205ENST00000542541 SOGA3Q5TF21 947 aa28.55■■■□□ 2.16
HOMER3-205ENST00000542541 SMC5Q8IY18 1101 aa28.55■■■□□ 2.16
HOMER3-205ENST00000542541 TAF1P21675 1872 aa28.54■■■□□ 2.16
HOMER3-205ENST00000542541 C7orf43Q8WVR3 580 aa28.54■■■□□ 2.16
HOMER3-205ENST00000542541 KIF1BPQ96EK5 621 aa28.54■■■□□ 2.16
HOMER3-205ENST00000542541 BCS1LQ9Y276 419 aa28.54■■■□□ 2.16
HOMER3-205ENST00000542541 GOLGB1Q14789 3259 aaKnown RBP28.54■■■□□ 2.16
HOMER3-205ENST00000542541 ANKIB1Q9P2G1 1089 aa28.54■■■□□ 2.16
HOMER3-205ENST00000542541 ZBTB47Q9UFB7 747 aaPredicted RBP28.54■■■□□ 2.16
HOMER3-205ENST00000542541 COL4A1P02462 1669 aa28.54■■■□□ 2.16
HOMER3-205ENST00000542541 C21orf2O43822 256 aa28.53■■■□□ 2.16
HOMER3-205ENST00000542541 SASH1O94885 1247 aa28.53■■■□□ 2.16
HOMER3-205ENST00000542541 B4GALNT3Q6L9W6 998 aa28.53■■■□□ 2.16
HOMER3-205ENST00000542541 CENPQQ7L2Z9 268 aaPredicted RBP28.53■■■□□ 2.16
HOMER3-205ENST00000542541 RHPN1Q8TCX5 695 aa28.53■■■□□ 2.16
HOMER3-205ENST00000542541 LRRCC1Q9C099 1032 aa28.53■■■□□ 2.16
HOMER3-205ENST00000542541 APBB1O00213 710 aa28.52■■■□□ 2.16
HOMER3-205ENST00000542541 ZNF219Q9P2Y4 722 aaPredicted RBP28.52■■■□□ 2.16
HOMER3-205ENST00000542541 NSFL1CQ9UNZ2 370 aaKnown RBP28.52■■■□□ 2.16
HOMER3-205ENST00000542541 XDHP47989 1333 aa28.52■■■□□ 2.16
HOMER3-205ENST00000542541 PDE8BO95263 885 aa28.51■■■□□ 2.15
HOMER3-205ENST00000542541 TFCP2Q12800 502 aa28.51■■■□□ 2.15
HOMER3-205ENST00000542541 WWC3Q9ULE0 1092 aa28.51■■■□□ 2.15
HOMER3-205ENST00000542541 AKAP2Q9Y2D5 859 aa28.51■■■□□ 2.15
HOMER3-205ENST00000542541 MPNDQ8N594 471 aa28.51■■■□□ 2.15
HOMER3-205ENST00000542541 HELBQ8NG08 1087 aaPredicted RBP28.51■■■□□ 2.15
HOMER3-205ENST00000542541 PODXL2Q9NZ53 605 aa28.51■■■□□ 2.15
HOMER3-205ENST00000542541 CACNA1SQ13698 1873 aa28.5■■■□□ 2.15
HOMER3-205ENST00000542541 SLX4Q8IY92 1834 aa28.5■■■□□ 2.15
HOMER3-205ENST00000542541 CCDC93Q567U6 631 aa28.5■■■□□ 2.15
HOMER3-205ENST00000542541 RTKN2Q8IZC4 609 aa28.5■■■□□ 2.15
HOMER3-205ENST00000542541 TAF5LO75529 589 aa28.49■■■□□ 2.15
HOMER3-205ENST00000542541 GPSM2P81274 684 aa28.49■■■□□ 2.15
HOMER3-205ENST00000542541 VGLL2Q8N8G2 317 aa28.49■■■□□ 2.15
HOMER3-205ENST00000542541 LEMD3Q9Y2U8 911 aa28.49■■■□□ 2.15
HOMER3-205ENST00000542541 ANKRD45Q5TZF3 282 aa28.48■■■□□ 2.15
HOMER3-205ENST00000542541 DPP8Q6V1X1 898 aaPredicted RBP28.48■■■□□ 2.15
HOMER3-205ENST00000542541 GPR108Q9NPR9 543 aa28.48■■■□□ 2.15
HOMER3-205ENST00000542541 KDM2BQ8NHM5 1336 aa28.48■■■□□ 2.15
HOMER3-205ENST00000542541 ATP2B4P23634 1241 aa28.47■■■□□ 2.15
HOMER3-205ENST00000542541 KCNJ4P48050 445 aa28.47■■■□□ 2.15
HOMER3-205ENST00000542541 PUM3Q15397 648 aaKnown RBP28.47■■■□□ 2.15
HOMER3-205ENST00000542541 CLASRPQ8N2M8 674 aaKnown RBP28.47■■■□□ 2.15
HOMER3-205ENST00000542541 UBE4AQ14139 1066 aa28.47■■■□□ 2.15
HOMER3-205ENST00000542541 OLFM4Q6UX06 510 aa28.47■■■□□ 2.15
HOMER3-205ENST00000542541 GGA1Q9UJY5 639 aa28.47■■■□□ 2.15
HOMER3-205ENST00000542541 SPEF2Q9C093 1822 aa28.46■■■□□ 2.15
HOMER3-205ENST00000542541 IL1RAPL2Q9NP60 686 aa28.45■■■□□ 2.14
HOMER3-205ENST00000542541 ATP2B3Q16720 1220 aa28.44■■■□□ 2.14
HOMER3-205ENST00000542541 LPIN2Q92539 896 aa28.44■■■□□ 2.14
HOMER3-205ENST00000542541 ZNF804BA4D1E1 1349 aa28.44■■■□□ 2.14
HOMER3-205ENST00000542541 NUCB1Q02818 461 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 TNNI3KQ59H18 835 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 SLC51AQ86UW1 340 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 SUPT20HQ8NEM7 779 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 FPGT-TNNI3KV9GXZ4 949 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 LRRC37AA6NMS7 1700 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 ARFGEF1Q9Y6D6 1849 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 C6orf229H3BNL8 230 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 UFL1O94874 794 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 IFIT1P09914 478 aaKnown RBP28.43■■■□□ 2.14
HOMER3-205ENST00000542541 SLC5A1P13866 664 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 TBC1D16Q8TBP0 767 aa28.43■■■□□ 2.14
HOMER3-205ENST00000542541 FGFR2P21802 821 aa28.42■■■□□ 2.14
HOMER3-205ENST00000542541 CHD1LQ86WJ1 897 aa28.42■■■□□ 2.14
HOMER3-205ENST00000542541 PELP1Q8IZL8 1130 aaKnown RBP28.42■■■□□ 2.14
HOMER3-205ENST00000542541 PSMD1Q99460 953 aa28.42■■■□□ 2.14
HOMER3-205ENST00000542541 RTFDC1Q9BY42 306 aaPredicted RBP28.42■■■□□ 2.14
HOMER3-205ENST00000542541 A0A1B0GUL7 405 aa28.41■■■□□ 2.14
HOMER3-205ENST00000542541 SMARCA5O60264 1052 aaPredicted RBP28.41■■■□□ 2.14
HOMER3-205ENST00000542541 NEUROD6Q96NK8 337 aa28.41■■■□□ 2.14
HOMER3-205ENST00000542541 EYA3Q99504 573 aa28.41■■■□□ 2.14
HOMER3-205ENST00000542541 POLLQ9UGP5 575 aa28.41■■■□□ 2.14
HOMER3-205ENST00000542541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.41■■■□□ 2.14
HOMER3-205ENST00000542541 TIMM10P62072 90 aa28.4■■■□□ 2.14
HOMER3-205ENST00000542541 AACSQ86V21 672 aa28.4■■■□□ 2.14
HOMER3-205ENST00000542541 BCL11AQ9H165 835 aa28.4■■■□□ 2.14
HOMER3-205ENST00000542541 IFIT2P09913 472 aaKnown RBP28.4■■■□□ 2.14
HOMER3-205ENST00000542541 EAF2Q96CJ1 260 aaPredicted RBP28.4■■■□□ 2.14
HOMER3-205ENST00000542541 FKBP4Q02790 459 aaKnown RBP eCLIP28.39■■■□□ 2.13
HOMER3-205ENST00000542541 GPR162Q16538 588 aa28.39■■■□□ 2.13
HOMER3-205ENST00000542541 SNED1Q8TER0 1413 aa28.38■■■□□ 2.13
HOMER3-205ENST00000542541 SNAP23O00161 211 aa28.38■■■□□ 2.13
HOMER3-205ENST00000542541 LNPKQ9C0E8 428 aa28.38■■■□□ 2.13
HOMER3-205ENST00000542541 UTRNP46939 3433 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms