RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	SHTN1	A0MZ66	631 aa		11.51	□□□□□ -0.57
POLE-218	ENST00000542362	GLTPD2	A6NH11	291 aa		11.51	□□□□□ -0.57
POLE-218	ENST00000542362	RLBP1	P12271	317 aa		11.51	□□□□□ -0.57
POLE-218	ENST00000542362	DOK7	Q18PE1	504 aa		11.51	□□□□□ -0.57
POLE-218	ENST00000542362	ANKRD18A	Q8IVF6	992 aa		11.51	□□□□□ -0.57
POLE-218	ENST00000542362	LARGE2	Q8N3Y3	721 aa		11.51	□□□□□ -0.57
POLE-218	ENST00000542362	HELB	Q8NG08	1087 aa	Predicted RBP	11.51	□□□□□ -0.57
POLE-218	ENST00000542362	PUS3	Q9BZE2	481 aa	Known RBP	11.51	□□□□□ -0.57
POLE-218	ENST00000542362	UTY	O14607	1347 aa		11.51	□□□□□ -0.57
POLE-218	ENST00000542362	UFL1	O94874	794 aa		11.5	□□□□□ -0.57
POLE-218	ENST00000542362	CT47B1	P0C2W7	299 aa	Predicted RBP	11.5	□□□□□ -0.57
POLE-218	ENST00000542362	APLP1	P51693	650 aa		11.5	□□□□□ -0.57
POLE-218	ENST00000542362	BRPF1	P55201	1214 aa	Predicted RBP	11.5	□□□□□ -0.57
POLE-218	ENST00000542362	TXNRD3	Q86VQ6	643 aa		11.5	□□□□□ -0.57
POLE-218	ENST00000542362	TBC1D16	Q8TBP0	767 aa		11.5	□□□□□ -0.57
POLE-218	ENST00000542362	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.5	□□□□□ -0.57
POLE-218	ENST00000542362	MINPP1	Q9UNW1	487 aa		11.5	□□□□□ -0.57
POLE-218	ENST00000542362	GJA3	Q9Y6H8	435 aa		11.5	□□□□□ -0.57
POLE-218	ENST00000542362	C6orf229	H3BNL8	230 aa		11.49	□□□□□ -0.57
POLE-218	ENST00000542362	FZD9	O00144	591 aa		11.49	□□□□□ -0.57
POLE-218	ENST00000542362	PLIN1	O60240	522 aa		11.49	□□□□□ -0.57
POLE-218	ENST00000542362	TAF5L	O75529	589 aa		11.49	□□□□□ -0.57
POLE-218	ENST00000542362	CC2D2B	Q6DHV5	1058 aa		11.49	□□□□□ -0.57
POLE-218	ENST00000542362	TMEM57	Q8N5G2	664 aa		11.49	□□□□□ -0.57
POLE-218	ENST00000542362	KIF16B	Q96L93	1317 aa		11.49	□□□□□ -0.57
POLE-218	ENST00000542362	RAD17	O75943	681 aa		11.48	□□□□□ -0.57
POLE-218	ENST00000542362	CHRND	Q07001	517 aa		11.48	□□□□□ -0.57
POLE-218	ENST00000542362	KIAA2012	Q0VF49	1180 aa		11.48	□□□□□ -0.57
POLE-218	ENST00000542362	LRRC24	Q50LG9	513 aa		11.48	□□□□□ -0.57
POLE-218	ENST00000542362	CDC5L	Q99459	802 aa	Known RBP	11.48	□□□□□ -0.57
POLE-218	ENST00000542362	ANKIB1	Q9P2G1	1089 aa		11.48	□□□□□ -0.57
POLE-218	ENST00000542362	LRRFIP2	Q9Y608	721 aa	Known RBP	11.48	□□□□□ -0.57
POLE-218	ENST00000542362	KDM2B	Q8NHM5	1336 aa		11.47	□□□□□ -0.57
POLE-218	ENST00000542362	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.47	□□□□□ -0.57
POLE-218	ENST00000542362	ANKRD18B	A2A2Z9	1011 aa		11.47	□□□□□ -0.57
POLE-218	ENST00000542362	CXCL9	Q07325	125 aa		11.47	□□□□□ -0.57
POLE-218	ENST00000542362	ATF7IP	Q6VMQ6	1270 aa		11.47	□□□□□ -0.57
POLE-218	ENST00000542362	NIM1K	Q8IY84	436 aa		11.47	□□□□□ -0.57
POLE-218	ENST00000542362	API5	Q9BZZ5	524 aa	Known RBP	11.47	□□□□□ -0.57
POLE-218	ENST00000542362	C1orf115	Q9H7X2	142 aa		11.47	□□□□□ -0.57
POLE-218	ENST00000542362	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.47	□□□□□ -0.57
POLE-218	ENST00000542362	XDH	P47989	1333 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	IRS2	Q9Y4H2	1338 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	ECE2	O60344	883 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	IGHMBP2	P38935	993 aa	Known RBP	11.46	□□□□□ -0.57
POLE-218	ENST00000542362	RFX5	P48382	616 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-218	ENST00000542362	CCT4	P50991	539 aa	Known RBP	11.46	□□□□□ -0.57
POLE-218	ENST00000542362	SCNN1D	P51172	638 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	HTRA3	P83110	453 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	WASHC4	Q2M389	1173 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	RABL6	Q3YEC7	729 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-218	ENST00000542362	PANK1	Q8TE04	598 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	JDP2	Q8WYK2	163 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	MXD3	Q9BW11	206 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	BSDC1	Q9NW68	430 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-218	ENST00000542362	PODXL2	Q9NZ53	605 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	GGA1	Q9UJY5	639 aa		11.46	□□□□□ -0.57
POLE-218	ENST00000542362	PA2G4	Q9UQ80	394 aa	Known RBP	11.46	□□□□□ -0.57
POLE-218	ENST00000542362	PSMD14	O00487	310 aa		11.45	□□□□□ -0.58
POLE-218	ENST00000542362	TOMM70	O94826	608 aa		11.45	□□□□□ -0.58
POLE-218	ENST00000542362	EPS15	P42566	896 aa		11.45	□□□□□ -0.58
POLE-218	ENST00000542362	IFIT5	Q13325	482 aa	Known RBP	11.45	□□□□□ -0.58
POLE-218	ENST00000542362	C20orf194	Q5TEA3	1177 aa		11.45	□□□□□ -0.58
POLE-218	ENST00000542362	ZKSCAN2	Q63HK3	967 aa		11.45	□□□□□ -0.58
POLE-218	ENST00000542362	INTS3	Q68E01	1043 aa	Known RBP	11.45	□□□□□ -0.58
POLE-218	ENST00000542362	TMC4	Q7Z404	712 aa		11.45	□□□□□ -0.58
POLE-218	ENST00000542362	MPHOSPH8	Q99549	860 aa		11.45	□□□□□ -0.58
POLE-218	ENST00000542362	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.45	□□□□□ -0.58
POLE-218	ENST00000542362	AKAP11	Q9UKA4	1901 aa		11.45	□□□□□ -0.58
POLE-218	ENST00000542362	EGFR	P00533	1210 aa		11.44	□□□□□ -0.58
POLE-218	ENST00000542362	UBTFL1	P0CB47	393 aa	Predicted RBP	11.44	□□□□□ -0.58
POLE-218	ENST00000542362	HSP90B1	P14625	803 aa	Known RBP	11.44	□□□□□ -0.58
POLE-218	ENST00000542362	EIF6	P56537	245 aa	Known RBP	11.44	□□□□□ -0.58
POLE-218	ENST00000542362	FMR1	Q06787	632 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
POLE-218	ENST00000542362	CCDC57	Q2TAC2	916 aa		11.44	□□□□□ -0.58
POLE-218	ENST00000542362	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.44	□□□□□ -0.58
POLE-218	ENST00000542362	SUPT20H	Q8NEM7	779 aa		11.44	□□□□□ -0.58
POLE-218	ENST00000542362	SIL1	Q9H173	461 aa		11.44	□□□□□ -0.58
POLE-218	ENST00000542362	TMX4	Q9H1E5	349 aa	Predicted RBP	11.44	□□□□□ -0.58
POLE-218	ENST00000542362	JAG2	Q9Y219	1238 aa		11.44	□□□□□ -0.58
POLE-218	ENST00000542362	PCNT	O95613	3336 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	MED23	Q9ULK4	1368 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	MYH2	Q9UKX2	1941 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	GMPS	P49915	693 aa	Predicted RBP	11.43	□□□□□ -0.58
POLE-218	ENST00000542362	EAPP	Q56P03	285 aa	Predicted RBP	11.43	□□□□□ -0.58
POLE-218	ENST00000542362	TAF7L	Q5H9L4	462 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	CIAPIN1	Q6FI81	312 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	DPY19L2	Q6NUT2	758 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	LDHAL6A	Q6ZMR3	332 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	ARHGAP45	Q92619	1136 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.43	□□□□□ -0.58
POLE-218	ENST00000542362	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.43	□□□□□ -0.58
POLE-218	ENST00000542362	CNNM1	Q9NRU3	951 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	ZNRF3	Q9ULT6	936 aa		11.43	□□□□□ -0.58
POLE-218	ENST00000542362	CDK5RAP2	Q96SN8	1893 aa		11.42	□□□□□ -0.58
POLE-218	ENST00000542362	ZNF804B	A4D1E1	1349 aa		11.42	□□□□□ -0.58
POLE-218	ENST00000542362	PNMA6E	A0A0J9YXQ4	647 aa		11.42	□□□□□ -0.58
POLE-218	ENST00000542362	VEGFA	P15692	232 aa	Predicted RBP	11.42	□□□□□ -0.58
POLE-218	ENST00000542362	ATP2B4	P23634	1241 aa		11.42	□□□□□ -0.58
POLE-218	ENST00000542362	PTPN12	Q05209	780 aa	Known RBP	11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms