RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 DBNDD1Q9H9R9 158 aa19.23■□□□□ 0.67
ITM2C-208ENST00000541852 ANKIB1Q9P2G1 1089 aa19.23■□□□□ 0.67
ITM2C-208ENST00000541852 ECE2O60344 883 aa19.22■□□□□ 0.67
ITM2C-208ENST00000541852 CCDC27Q2M243 656 aa19.22■□□□□ 0.67
ITM2C-208ENST00000541852 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
ITM2C-208ENST00000541852 STK31Q9BXU1 1019 aa19.22■□□□□ 0.67
ITM2C-208ENST00000541852 GGA1Q9UJY5 639 aa19.22■□□□□ 0.67
ITM2C-208ENST00000541852 VIL1P09327 827 aaKnown RBP19.21■□□□□ 0.67
ITM2C-208ENST00000541852 NEXNQ0ZGT2 675 aa19.21■□□□□ 0.67
ITM2C-208ENST00000541852 KSR2Q6VAB6 950 aa19.21■□□□□ 0.67
ITM2C-208ENST00000541852 ANKRD18AQ8IVF6 992 aa19.21■□□□□ 0.67
ITM2C-208ENST00000541852 TRPM4Q8TD43 1214 aa19.21■□□□□ 0.67
ITM2C-208ENST00000541852 ZBTB12Q9Y330 459 aaPredicted RBP19.21■□□□□ 0.67
ITM2C-208ENST00000541852 GRM1Q13255 1194 aa19.2■□□□□ 0.66
ITM2C-208ENST00000541852 DOK7Q18PE1 504 aa19.2■□□□□ 0.66
ITM2C-208ENST00000541852 USP48Q86UV5 1035 aa19.2■□□□□ 0.66
ITM2C-208ENST00000541852 DCPSQ96C86 337 aaKnown RBP19.2■□□□□ 0.66
ITM2C-208ENST00000541852 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
ITM2C-208ENST00000541852 SEC31BQ9NQW1 1179 aa19.2■□□□□ 0.66
ITM2C-208ENST00000541852 DUOX1Q9NRD9 1551 aa19.19■□□□□ 0.66
ITM2C-208ENST00000541852 SAMD7Q7Z3H4 446 aa19.19■□□□□ 0.66
ITM2C-208ENST00000541852 MAP3K2Q9Y2U5 619 aa19.19■□□□□ 0.66
ITM2C-208ENST00000541852 UFL1O94874 794 aa19.18■□□□□ 0.66
ITM2C-208ENST00000541852 ATP2B4P23634 1241 aa19.18■□□□□ 0.66
ITM2C-208ENST00000541852 BRPF1P55201 1214 aaPredicted RBP19.18■□□□□ 0.66
ITM2C-208ENST00000541852 KRT26Q7Z3Y9 468 aa19.18■□□□□ 0.66
ITM2C-208ENST00000541852 AGBL3Q8NEM8 1001 aa19.18■□□□□ 0.66
ITM2C-208ENST00000541852 ZNF408Q9H9D4 720 aa19.18■□□□□ 0.66
ITM2C-208ENST00000541852 XDHP47989 1333 aa19.18■□□□□ 0.66
ITM2C-208ENST00000541852 PI4KAP2A4QPH2 592 aa19.17■□□□□ 0.66
ITM2C-208ENST00000541852 NOGQ13253 232 aa19.17■□□□□ 0.66
ITM2C-208ENST00000541852 TBC1D10BQ4KMP7 808 aaPredicted RBP19.17■□□□□ 0.66
ITM2C-208ENST00000541852 PODNQ7Z5L7 613 aa19.17■□□□□ 0.66
ITM2C-208ENST00000541852 PI4KAP1Q8N8J0 262 aa19.17■□□□□ 0.66
ITM2C-208ENST00000541852 C2orf69Q8N8R5 385 aa19.17■□□□□ 0.66
ITM2C-208ENST00000541852 IL16Q14005 1332 aa19.17■□□□□ 0.66
ITM2C-208ENST00000541852 CCDC102AQ96A19 550 aa19.16■□□□□ 0.66
ITM2C-208ENST00000541852 KCNQ5Q9NR82 932 aa19.16■□□□□ 0.66
ITM2C-208ENST00000541852 BSDC1Q9NW68 430 aaPredicted RBP19.16■□□□□ 0.66
ITM2C-208ENST00000541852 SHTN1A0MZ66 631 aa19.15■□□□□ 0.66
ITM2C-208ENST00000541852 AOC2O75106 756 aa19.15■□□□□ 0.66
ITM2C-208ENST00000541852 MMP14P50281 582 aa19.15■□□□□ 0.66
ITM2C-208ENST00000541852 CTSWP56202 376 aa19.15■□□□□ 0.66
ITM2C-208ENST00000541852 HUNKP57058 714 aa19.15■□□□□ 0.66
ITM2C-208ENST00000541852 RBM26Q5T8P6 1007 aaKnown RBP19.15■□□□□ 0.66
ITM2C-208ENST00000541852 SULF1Q8IWU6 871 aa19.15■□□□□ 0.66
ITM2C-208ENST00000541852 WWC1Q8IX03 1113 aa19.15■□□□□ 0.66
ITM2C-208ENST00000541852 TSPYL6Q8N831 410 aa19.15■□□□□ 0.66
ITM2C-208ENST00000541852 THSD7BQ9C0I4 1608 aa19.14■□□□□ 0.66
ITM2C-208ENST00000541852 SLC4A2P04920 1241 aa19.14■□□□□ 0.65
ITM2C-208ENST00000541852 KIF4BQ2VIQ3 1234 aa19.14■□□□□ 0.65
ITM2C-208ENST00000541852 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.65
ITM2C-208ENST00000541852 RSBN1LQ6PCB5 846 aaPredicted RBP19.14■□□□□ 0.65
ITM2C-208ENST00000541852 TTLL11Q8NHH1 800 aa19.14■□□□□ 0.65
ITM2C-208ENST00000541852 GBA2Q9HCG7 927 aaPredicted RBP19.14■□□□□ 0.65
ITM2C-208ENST00000541852 RTL9Q8NET4 1388 aa19.14■□□□□ 0.65
ITM2C-208ENST00000541852 USP17L3A6NCW0 530 aa19.13■□□□□ 0.65
ITM2C-208ENST00000541852 USP17L4A6NCW7 530 aa19.13■□□□□ 0.65
ITM2C-208ENST00000541852 IGKV5-2P06315 115 aa19.13■□□□□ 0.65
ITM2C-208ENST00000541852 ZNF280AP59817 542 aaPredicted RBP19.13■□□□□ 0.65
ITM2C-208ENST00000541852 USP17L1Q7RTZ2 530 aa19.13■□□□□ 0.65
ITM2C-208ENST00000541852 JARID2Q92833 1246 aaPredicted RBP19.13■□□□□ 0.65
ITM2C-208ENST00000541852 ZNF609O15014 1411 aa19.13■□□□□ 0.65
ITM2C-208ENST00000541852 POLR2AP24928 1970 aaKnown RBP19.13■□□□□ 0.65
ITM2C-208ENST00000541852 RGMBQ6NW40 437 aa19.12■□□□□ 0.65
ITM2C-208ENST00000541852 ABHD8Q96I13 439 aa19.12■□□□□ 0.65
ITM2C-208ENST00000541852 CCDC85AQ96PX6 553 aaPredicted RBP19.12■□□□□ 0.65
ITM2C-208ENST00000541852 NEURL1BA8MQ27 555 aa19.11■□□□□ 0.65
ITM2C-208ENST00000541852 H7C1W4 665 aa19.11■□□□□ 0.65
ITM2C-208ENST00000541852 USP17L8P0C7I0 530 aa19.11■□□□□ 0.65
ITM2C-208ENST00000541852 REM2Q8IYK8 340 aaPredicted RBP19.11■□□□□ 0.65
ITM2C-208ENST00000541852 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
ITM2C-208ENST00000541852 MYH16Q9H6N6 1097 aa19.11■□□□□ 0.65
ITM2C-208ENST00000541852 MINPP1Q9UNW1 487 aa19.11■□□□□ 0.65
ITM2C-208ENST00000541852 LEMD3Q9Y2U8 911 aa19.11■□□□□ 0.65
ITM2C-208ENST00000541852 EGFRP00533 1210 aa19.1■□□□□ 0.65
ITM2C-208ENST00000541852 IGHMBP2P38935 993 aaKnown RBP19.1■□□□□ 0.65
ITM2C-208ENST00000541852 PLA2G12BQ9BX93 195 aa19.1■□□□□ 0.65
ITM2C-208ENST00000541852 PITPNM2Q9BZ72 1349 aa19.09■□□□□ 0.65
ITM2C-208ENST00000541852 FKBP1BP68106 108 aa19.09■□□□□ 0.65
ITM2C-208ENST00000541852 SCARF1Q14162 830 aa19.09■□□□□ 0.65
ITM2C-208ENST00000541852 WDR63Q8IWG1 891 aa19.09■□□□□ 0.65
ITM2C-208ENST00000541852 OGFOD1Q8N543 542 aa19.09■□□□□ 0.65
ITM2C-208ENST00000541852 GMLQ99445 158 aa19.09■□□□□ 0.65
ITM2C-208ENST00000541852 ANKRD2Q9GZV1 360 aa19.09■□□□□ 0.65
ITM2C-208ENST00000541852 GREM2Q9H772 168 aa19.09■□□□□ 0.65
ITM2C-208ENST00000541852 MED23Q9ULK4 1368 aa19.08■□□□□ 0.65
ITM2C-208ENST00000541852 MYO3BQ8WXR4 1341 aa19.08■□□□□ 0.65
ITM2C-208ENST00000541852 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.64
ITM2C-208ENST00000541852 CCT4P50991 539 aaKnown RBP19.08■□□□□ 0.64
ITM2C-208ENST00000541852 ZNF157P51786 506 aaPredicted RBP19.08■□□□□ 0.64
ITM2C-208ENST00000541852 GCKRQ14397 625 aa19.08■□□□□ 0.64
ITM2C-208ENST00000541852 COA1Q9GZY4 146 aa19.08■□□□□ 0.64
ITM2C-208ENST00000541852 MYOZ2Q9NPC6 264 aa19.08■□□□□ 0.64
ITM2C-208ENST00000541852 GGA3Q9NZ52 723 aa19.08■□□□□ 0.64
ITM2C-208ENST00000541852 CACNA1FO60840 1977 aa19.08■□□□□ 0.64
ITM2C-208ENST00000541852 ADM5C9JUS6 153 aa19.07■□□□□ 0.64
ITM2C-208ENST00000541852 FLIIQ13045 1269 aa19.07■□□□□ 0.64
ITM2C-208ENST00000541852 CWF19L2Q2TBE0 894 aaKnown RBP19.07■□□□□ 0.64
ITM2C-208ENST00000541852 STRIP1Q5VSL9 837 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms